BLASTX nr result

ID: Coptis24_contig00010291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010291
         (3015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541893.1| PREDICTED: transcription factor GTE4-like [G...   328   7e-87
ref|XP_003539547.1| PREDICTED: uncharacterized protein LOC100781...   328   7e-87
ref|XP_002276195.1| PREDICTED: transcription factor GTE4-like [V...   325   6e-86
emb|CAN67478.1| hypothetical protein VITISV_035453 [Vitis vinifera]   325   6e-86
ref|XP_003540962.1| PREDICTED: transcription factor GTE4-like [G...   324   1e-85

>ref|XP_003541893.1| PREDICTED: transcription factor GTE4-like [Glycine max]
          Length = 640

 Score =  328 bits (840), Expect = 7e-87
 Identities = 195/425 (45%), Positives = 240/425 (56%), Gaps = 3/425 (0%)
 Frame = +3

Query: 1065 GGAGRMILDXXXXXXXXRRVISEVNS--VGKREPPRSLHQLRVSVMENNHGGISEYADKE 1238
            G + RM+          +R  SEV S  V  REP R LHQL VSV+EN+ G + E  +KE
Sbjct: 192  GNSDRMVDRGIGNGIGAKRAHSEVASAVVTLREPTRPLHQLSVSVLENSQG-VGEIVEKE 250

Query: 1239 KRTPKANPFYRNSDFIVGXXXXXXXXXXXXXXXXXXXXHTLGVRDYAFGLIKHTSQIFKN 1418
            KRTPKAN FYRNS+F++                     H  G   +  G     S++ K+
Sbjct: 251  KRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNGKK-HGTGEMGHGMG-----SKLLKS 304

Query: 1419 CCSLLSKLMKHKHGWVFNSPVDVQRLGLHDYFLIIKHPMDLGTVKNRMNSNWYRTPRDFA 1598
            C SLL KLMKHKHGWVF++PVDV+ LGLHDYF II HPMDLGTVK+R+N NWYR+P++FA
Sbjct: 305  CSSLLEKLMKHKHGWVFDTPVDVEGLGLHDYFSIITHPMDLGTVKSRLNKNWYRSPKEFA 364

Query: 1599 SDVRLTFQNAMIYNPKGQDVHVMAELLSNIFEERWAVMEHQYILDSWIEPYHDVHISTPM 1778
             DVRLTF NAM YNPKGQDVH+MAE LSNIFEERWA++E  Y  +  +    D    +P+
Sbjct: 365  EDVRLTFHNAMTYNPKGQDVHIMAEQLSNIFEERWAIIESNY--NREMTYGLDYGAPSPV 422

Query: 1779 MNMAPASFMPP-EIGRSFGRVEPTTPRPVSSNPKPVHHVSSRRGTTLQKPKAKDENKRDM 1955
               AP    PP ++ R   R E  T       PK +    S R    +KPKAKD +KRDM
Sbjct: 423  SRKAPPFRPPPIDMRRILDRSESMT-----QPPKIMGITPSSRTPAPKKPKAKDPHKRDM 477

Query: 1956 TYDEKQKLSANLQSLPSEKLDQIVDIIKRRSANLTQNXXXXXXXXXXXXXXTLWELDRFV 2135
            TY+EKQKLS +LQSLPSEKLD IV IIK+R++ L+Q+              TLWELDRFV
Sbjct: 478  TYEEKQKLSTHLQSLPSEKLDAIVQIIKKRNSALSQHDDEIEVDIDSVDTETLWELDRFV 537

Query: 2136 TNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNQAPATTEVSKEAKIDDHNTGLLPPAQAD 2315
            TN                             +QAP   E+  E + D+ N     P Q  
Sbjct: 538  TNYKKSLSKNKRKAELAIQAREQAEQNAQQKSQAPVEVEIPTETQADERNVPPSLPEQGQ 597

Query: 2316 KEQDN 2330
               DN
Sbjct: 598  VPVDN 602


>ref|XP_003539547.1| PREDICTED: uncharacterized protein LOC100781720 [Glycine max]
          Length = 901

 Score =  328 bits (840), Expect = 7e-87
 Identities = 189/404 (46%), Positives = 234/404 (57%), Gaps = 1/404 (0%)
 Frame = +3

Query: 1122 VISEVNSVGKREPPRSLHQLRVSVMENNHGGISEYADKEKRTPKANPFYRNSDFIVGXXX 1301
            V S V +  +REP R LHQL VSV+EN+ G ++E  +KEKRTP AN FYRNS+F++G   
Sbjct: 474  VASAVVTPREREPTRPLHQLSVSVLENSQG-VTEIVEKEKRTPTANQFYRNSEFLLGKDK 532

Query: 1302 XXXXXXXXXXXXXXXXXHTLGVRDYAFGLIKHTSQIFKNCCSLLSKLMKHKHGWVFNSPV 1481
                             H  G   +  G     S++ K+C +LL KLMKHKHGWVFN+PV
Sbjct: 533  FPPAESNKKSKLNGKK-HVEGEMGHGMG-----SKLLKSCSALLEKLMKHKHGWVFNAPV 586

Query: 1482 DVQRLGLHDYFLIIKHPMDLGTVKNRMNSNWYRTPRDFASDVRLTFQNAMIYNPKGQDVH 1661
            DV+ LGLHDYF II HPMDLGTVK+R+N NWY++P++FA DVRLTF NAM YNPKGQDVH
Sbjct: 587  DVEGLGLHDYFSIITHPMDLGTVKSRLNKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVH 646

Query: 1662 VMAELLSNIFEERWAVMEHQYILDSWIEPYHDVHISTPMMNMAPASFMPP-EIGRSFGRV 1838
            +MAE L NIFEERWA++E  Y  +  I    D    +P+   AP    PP ++ R   R 
Sbjct: 647  IMAEQLLNIFEERWAIIESNYYRE--IRYGLDYGAPSPVSRKAPPFRPPPIDMRRILDRS 704

Query: 1839 EPTTPRPVSSNPKPVHHVSSRRGTTLQKPKAKDENKRDMTYDEKQKLSANLQSLPSEKLD 2018
            E  T       PK +    S R    +KPKAKD +KRDMTY+EKQKLS +LQSLPSEKLD
Sbjct: 705  ESMT-----QPPKIMGITPSSRTPAPKKPKAKDPHKRDMTYEEKQKLSTHLQSLPSEKLD 759

Query: 2019 QIVDIIKRRSANLTQNXXXXXXXXXXXXXXTLWELDRFVTNXXXXXXXXXXXXXXXXXXX 2198
             IV IIK+R++ L+Q+              TLWELDRFVTN                   
Sbjct: 760  AIVQIIKKRNSALSQHDDEIEVDIDSVDTETLWELDRFVTNYKKSLSKNKRKAELAILAR 819

Query: 2199 XXXXXXXXXNNQAPATTEVSKEAKIDDHNTGLLPPAQADKEQDN 2330
                      +QAP   E+ KE + D+ N     P Q     DN
Sbjct: 820  ERAEQNAQQKSQAPVAVEIPKETQADERNVPPSLPEQGQIPVDN 863


>ref|XP_002276195.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
          Length = 654

 Score =  325 bits (832), Expect = 6e-86
 Identities = 193/431 (44%), Positives = 243/431 (56%), Gaps = 26/431 (6%)
 Frame = +3

Query: 1116 RRVISEVNSVGKREP---------------------PRSLHQLRVSVMENNHGGISEYAD 1232
            +RV SEV SV +  P                      R LHQL +SV+EN+ GG S+  +
Sbjct: 196  KRVSSEVASVNESRPLQQSRPLQQSRSFPQAKSLSQSRPLHQLSISVIENSQGG-SDVVE 254

Query: 1233 KEKRTPKANPFYRNSDFIVGXXXXXXXXXXXXXXXXXXXXHTLGVRDYAFGLIKHTSQIF 1412
            KEKRTPKAN FYRNS+F++G                       GV     G     ++ F
Sbjct: 255  KEKRTPKANQFYRNSEFLLGKEKFPTESNKKTKLNGKKHG---GVEP---GYGSAMNKCF 308

Query: 1413 KNCCSLLSKLMKHKHGWVFNSPVDVQRLGLHDYFLIIKHPMDLGTVKNRMNSNWYRTPRD 1592
            KNC +LL +LMKHKHGWVFNSPVDV+ LGLHDYF II  PMDLGTVK+R+N NWY++PR+
Sbjct: 309  KNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWYKSPRE 368

Query: 1593 FASDVRLTFQNAMIYNPKGQDVHVMAELLSNIFEERWAVMEHQYILDSWIEPYHDVHIST 1772
            FA DVRLTF NAM YNPKGQDVHVMAE+LS IFE++WAV+E +Y  +  +   +++ + T
Sbjct: 369  FAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIEAEYSRELRLGYEYEMGLPT 428

Query: 1773 PMMNMAPASFMPP-----EIGRSFGRVEPTTPRPVSSNPKPVHHVSSRRGTTLQKPKAKD 1937
            P     PA   PP     E+ R   R E  T   V    KP+++    R  +L+KPKAKD
Sbjct: 429  PTSRKLPAP--PPMLPSHEMRRVLDRSESMT-YAVDPKIKPMNYTPLVRTPSLKKPKAKD 485

Query: 1938 ENKRDMTYDEKQKLSANLQSLPSEKLDQIVDIIKRRSANLTQNXXXXXXXXXXXXXXTLW 2117
             NKRDMT++EKQKLS NLQ+LPSEKLD IV IIKR ++ L Q+              TLW
Sbjct: 486  PNKRDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDIDSVDAETLW 545

Query: 2118 ELDRFVTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNQAPATTEVSKEAKIDDHNTGLL 2297
            ELDR+VTN                             N  P  TE ++E  ID+ N    
Sbjct: 546  ELDRYVTN-YKKSLSKNKRKAELAQARAEAARKIQERNPVPVVTEAARETNIDERNISSS 604

Query: 2298 PPAQADKEQDN 2330
             P Q +K+ +N
Sbjct: 605  SPVQGEKQGEN 615


>emb|CAN67478.1| hypothetical protein VITISV_035453 [Vitis vinifera]
          Length = 660

 Score =  325 bits (832), Expect = 6e-86
 Identities = 193/431 (44%), Positives = 243/431 (56%), Gaps = 26/431 (6%)
 Frame = +3

Query: 1116 RRVISEVNSVGKREP---------------------PRSLHQLRVSVMENNHGGISEYAD 1232
            +RV SEV SV +  P                      R LHQL +SV+EN+ GG S+  +
Sbjct: 196  KRVSSEVASVNESRPLQQSRPLQQSRSFPQAKSLSQSRPLHQLSISVIENSQGG-SDVVE 254

Query: 1233 KEKRTPKANPFYRNSDFIVGXXXXXXXXXXXXXXXXXXXXHTLGVRDYAFGLIKHTSQIF 1412
            KEKRTPKAN FYRNS+F++G                       GV     G     ++ F
Sbjct: 255  KEKRTPKANQFYRNSEFLLGKEKFPTESNKKTKLNGKKHG---GVEP---GYGSAMNKCF 308

Query: 1413 KNCCSLLSKLMKHKHGWVFNSPVDVQRLGLHDYFLIIKHPMDLGTVKNRMNSNWYRTPRD 1592
            KNC +LL +LMKHKHGWVFNSPVDV+ LGLHDYF II  PMDLGTVK+R+N NWY++PR+
Sbjct: 309  KNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWYKSPRE 368

Query: 1593 FASDVRLTFQNAMIYNPKGQDVHVMAELLSNIFEERWAVMEHQYILDSWIEPYHDVHIST 1772
            FA DVRLTF NAM YNPKGQDVHVMAE+LS IFE++WAV+E +Y  +  +   +++ + T
Sbjct: 369  FAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIEAEYSRELRLGYEYEMGLPT 428

Query: 1773 PMMNMAPASFMPP-----EIGRSFGRVEPTTPRPVSSNPKPVHHVSSRRGTTLQKPKAKD 1937
            P     PA   PP     E+ R   R E  T   V    KP+++    R  +L+KPKAKD
Sbjct: 429  PTSRKLPAP--PPMLPSHEMRRVLDRSESMT-YAVDPKIKPMNYTPLVRTPSLKKPKAKD 485

Query: 1938 ENKRDMTYDEKQKLSANLQSLPSEKLDQIVDIIKRRSANLTQNXXXXXXXXXXXXXXTLW 2117
             NKRDMT++EKQKLS NLQ+LPSEKLD IV IIKR ++ L Q+              TLW
Sbjct: 486  PNKRDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDIDSVDAETLW 545

Query: 2118 ELDRFVTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNQAPATTEVSKEAKIDDHNTGLL 2297
            ELDR+VTN                             N  P  TE ++E  ID+ N    
Sbjct: 546  ELDRYVTN-YKKSLSKNKRKAELAQARAEAARKIQERNPVPVVTEAARETNIDERNISSS 604

Query: 2298 PPAQADKEQDN 2330
             P Q +K+ +N
Sbjct: 605  SPVQGEKQGEN 615


>ref|XP_003540962.1| PREDICTED: transcription factor GTE4-like [Glycine max]
          Length = 874

 Score =  324 bits (830), Expect = 1e-85
 Identities = 212/508 (41%), Positives = 275/508 (54%), Gaps = 23/508 (4%)
 Frame = +3

Query: 876  DCGAGASIPEVSMIP---EVGLNNGV------SRTMISEFNLDNGGARRMMSEVSFDNGG 1028
            D G  + I +   +P   ++ L NGV       R  I+  +      R +  ++  + G 
Sbjct: 341  DDGPSSPIHQQEAVPSSRDLTLGNGVVEPQWRDRIKINLASKSKQQMRELRWKLERELGI 400

Query: 1029 GRRMVSEVNVDN---GGAGR---MILDXXXXXXXXRRVISEVNSVG-KREPP--RSLHQL 1181
             R +V+ + V     GG G    +I          +R  SEV S G  REP   R LHQL
Sbjct: 401  VRCLVNRIEVKQRPVGGYGNSNVLIDSGINNVGGAKRAHSEVASAGVPREPASTRPLHQL 460

Query: 1182 RVSVMENNHGGISEYADKEKRTPKANPFYRNSDFIVGXXXXXXXXXXXXXXXXXXXXHTL 1361
             +S++EN+ G I E  +KEKRTPKAN FYRNS+F++                        
Sbjct: 461  SLSMLENSQG-ICETVEKEKRTPKANQFYRNSEFLLAKDKFPPAESNKKSKLNWKKQGG- 518

Query: 1362 GVRDYAFGLIKHTSQIFKNCCSLLSKLMKHKHGWVFNSPVDVQRLGLHDYFLIIKHPMDL 1541
            G   + FG+    S+ FK+C SLL KLMKHKHGWVFN+PVDV+ LGLHDYF II HPMDL
Sbjct: 519  GEMGHGFGM---GSKFFKSCSSLLEKLMKHKHGWVFNAPVDVEALGLHDYFTIITHPMDL 575

Query: 1542 GTVKNRMNSNWYRTPRDFASDVRLTFQNAMIYNPKGQDVHVMAELLSNIFEERWAVMEHQ 1721
            GTVK+R+N NWY++P++FA DVRLTF+NAM YNP GQDVH+MAE LS IFE+RWA++E  
Sbjct: 576  GTVKSRLNKNWYKSPKEFAEDVRLTFRNAMTYNPPGQDVHIMAEQLSKIFEDRWAIIESD 635

Query: 1722 YILD-SWIEPYHDVHISTPMMNMAPASFMPP--EIGRSFGRVE--PTTPRPVSSNPKPVH 1886
            Y  +  +   Y  V  +   ++   ++F PP  ++ R   R E    TPR +S  P    
Sbjct: 636  YNREMRYGFDYGAVAPALSPLSRRVSAFTPPPLDMRRILNRSESMTQTPRLMSITP---- 691

Query: 1887 HVSSRRGTTLQKPKAKDENKRDMTYDEKQKLSANLQSLPSEKLDQIVDIIKRRSANLTQN 2066
               S R    +KPKAKD +KRDMT++EKQKLS NLQSLPSEKLD IV IIK+R++ L Q+
Sbjct: 692  ---SSRTPAPKKPKAKDPHKRDMTFEEKQKLSTNLQSLPSEKLDAIVQIIKKRNSALNQH 748

Query: 2067 XXXXXXXXXXXXXXTLWELDRFVTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNQAPAT 2246
                          TLWELDRFVTN                             +QAPA 
Sbjct: 749  DDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELAQARAEALQQNAIQKSQAPAM 808

Query: 2247 TEVSKEAKIDDHNTGLLPPAQADKEQDN 2330
             E+ KE   D+ N     PAQ   + DN
Sbjct: 809  AEIPKETLTDERNLPQPLPAQRGNQADN 836


Top