BLASTX nr result

ID: Coptis24_contig00010282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010282
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002440729.1| hypothetical protein SORBIDRAFT_09g005720 [S...    80   9e-22
ref|XP_002279199.1| PREDICTED: serine/threonine-protein kinase C...    78   4e-21
emb|CBI27873.3| unnamed protein product [Vitis vinifera]               78   4e-21
dbj|BAC76895.1| protein kinase [Raphanus sativus]                      76   6e-21
ref|XP_002869224.1| hypothetical protein ARALYDRAFT_913113 [Arab...    76   6e-21

>ref|XP_002440729.1| hypothetical protein SORBIDRAFT_09g005720 [Sorghum bicolor]
           gi|241946014|gb|EES19159.1| hypothetical protein
           SORBIDRAFT_09g005720 [Sorghum bicolor]
          Length = 376

 Score = 79.7 bits (195), Expect(2) = 9e-22
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = -1

Query: 143 LFKIMEYLPGGDMMTLRMREDTLTESVARFYIA*SVLAIEFIHTHNY 3
           L+ IMEYLPGGDMMTL MREDTLTE+VARFYIA +VLAIE IH HNY
Sbjct: 190 LYLIMEYLPGGDMMTLLMREDTLTENVARFYIAETVLAIESIHKHNY 236



 Score = 49.3 bits (116), Expect(2) = 9e-22
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -3

Query: 216 VEHVRA*RNLLAEVGRHYIVKLHYSFQD 133
           VEHVRA RNLLAEVG H IVKL+YSFQD
Sbjct: 159 VEHVRAERNLLAEVGSHCIVKLYYSFQD 186


>ref|XP_002279199.1| PREDICTED: serine/threonine-protein kinase CBK1-like [Vitis
           vinifera]
          Length = 515

 Score = 77.8 bits (190), Expect(2) = 4e-21
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = -1

Query: 143 LFKIMEYLPGGDMMTLRMREDTLTESVARFYIA*SVLAIEFIHTHNY 3
           L+ IMEYLPGGDMMTL MRE+TLTE+VA+FY+A SVLAIE IH HNY
Sbjct: 175 LYLIMEYLPGGDMMTLLMREETLTETVAKFYVAQSVLAIESIHKHNY 221



 Score = 48.9 bits (115), Expect(2) = 4e-21
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = -3

Query: 216 VEHVRA*RNLLAEVGRHYIVKLHYSFQDN 130
           VEHVRA RNLLAEV  H+IVKL+YSFQD+
Sbjct: 144 VEHVRAERNLLAEVDSHFIVKLYYSFQDD 172


>emb|CBI27873.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score = 77.8 bits (190), Expect(2) = 4e-21
 Identities = 37/47 (78%), Positives = 42/47 (89%)
 Frame = -1

Query: 143 LFKIMEYLPGGDMMTLRMREDTLTESVARFYIA*SVLAIEFIHTHNY 3
           L+ IMEYLPGGDMMTL MRE+TLTE+VA+FY+A SVLAIE IH HNY
Sbjct: 146 LYLIMEYLPGGDMMTLLMREETLTETVAKFYVAQSVLAIESIHKHNY 192



 Score = 48.9 bits (115), Expect(2) = 4e-21
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = -3

Query: 216 VEHVRA*RNLLAEVGRHYIVKLHYSFQDN 130
           VEHVRA RNLLAEV  H+IVKL+YSFQD+
Sbjct: 115 VEHVRAERNLLAEVDSHFIVKLYYSFQDD 143


>dbj|BAC76895.1| protein kinase [Raphanus sativus]
          Length = 541

 Score = 75.9 bits (185), Expect(2) = 6e-21
 Identities = 38/47 (80%), Positives = 40/47 (85%)
 Frame = -1

Query: 143 LFKIMEYLPGGDMMTLRMREDTLTESVARFYIA*SVLAIEFIHTHNY 3
           L+ IMEYLPGGDMMTL MREDTL E VARFYIA SVLAIE IH +NY
Sbjct: 190 LYLIMEYLPGGDMMTLLMREDTLREDVARFYIAQSVLAIESIHRYNY 236



 Score = 50.4 bits (119), Expect(2) = 6e-21
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -3

Query: 216 VEHVRA*RNLLAEVGRHYIVKLHYSFQD 133
           VEHVRA RNLLAEV  HYIVKL+YSFQD
Sbjct: 159 VEHVRAERNLLAEVASHYIVKLYYSFQD 186


>ref|XP_002869224.1| hypothetical protein ARALYDRAFT_913113 [Arabidopsis lyrata subsp.
           lyrata] gi|297315060|gb|EFH45483.1| hypothetical protein
           ARALYDRAFT_913113 [Arabidopsis lyrata subsp. lyrata]
          Length = 519

 Score = 75.9 bits (185), Expect(2) = 6e-21
 Identities = 38/47 (80%), Positives = 40/47 (85%)
 Frame = -1

Query: 143 LFKIMEYLPGGDMMTLRMREDTLTESVARFYIA*SVLAIEFIHTHNY 3
           L+ IMEYLPGGDMMTL MREDTL E VARFYIA SVLAIE IH +NY
Sbjct: 167 LYLIMEYLPGGDMMTLLMREDTLREDVARFYIAQSVLAIESIHRYNY 213



 Score = 50.4 bits (119), Expect(2) = 6e-21
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -3

Query: 216 VEHVRA*RNLLAEVGRHYIVKLHYSFQD 133
           VEHVRA RNLLAEV  HYIVKL+YSFQD
Sbjct: 136 VEHVRAERNLLAEVASHYIVKLYYSFQD 163


Top