BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010276
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|2...   233   5e-59
ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vit...   233   7e-59
ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|2...   231   3e-58
ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|2...   230   4e-58
ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vit...   227   4e-57

>ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|222853349|gb|EEE90896.1|
            predicted protein [Populus trichocarpa]
          Length = 276

 Score =  233 bits (595), Expect = 5e-59
 Identities = 132/286 (46%), Positives = 169/286 (59%), Gaps = 6/286 (2%)
 Frame = -1

Query: 1122 PTLLRPPKSLLTIYIHTPCLTMASANKLHLKNPXXXXXXXXXXXSPNMDIESIALPPPPF 943
            P+  +PPK+    +  TP  T    N     NP            PN      A  P P 
Sbjct: 10   PSSSKPPKN----HHSTPKATTPQTNTTQNSNPTTN---------PNP-----AANPSP- 50

Query: 942  TLDELQEDLILSKSEYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYYWNYG 763
             L    +D +LS++ ++TRQE+++RR  +LK   K ++DYYWALME+ +V +REYYW YG
Sbjct: 51   -LSPSLKDQVLSRATHITRQELLKRRSHKLKQLSKCFKDYYWALMEELKVLYREYYWKYG 109

Query: 762  KSPFKXXXXXXXXXXXXXXXXXXXXXXXXGKLGLG------LNENCSSGGSGIVKNRKCA 601
             SPFK                           G G      + EN ++  S +  N +C 
Sbjct: 110  VSPFKEDHHNTLQKVEQHKQGGGFGVLEREN-GEGEANIEVIGEN-NNNFSDLKSNHRCL 167

Query: 600  FSGCKSKAMALTNYCHLHILLDTKQKLYKACNYIVKSQHTGPVHCGKPILRSTEPSLCSV 421
            F GCK KAMALT++CHLHIL D KQKLYK C Y++KS   GP+ CGKPILRST P+LC+V
Sbjct: 168  FVGCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRSTAPALCTV 227

Query: 420  HFEKAQKHVTRALKKAGLNISSASKLAPKFHVIVAESVRHINMKRR 283
            HF+KAQKHVT+AL+KAGLN+SS+SKLAPKFHVIV E VR I  KR+
Sbjct: 228  HFQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTEYVRQIQAKRK 273


>ref|XP_003635084.1| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 237

 Score =  233 bits (594), Expect = 7e-59
 Identities = 120/228 (52%), Positives = 151/228 (66%)
 Frame = -1

Query: 921 DLILSKSEYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYYWNYGKSPFKXX 742
           D +LS S YLTRQEVIRRR RR+K   K Y  +YW+LM++ ++++REYYW YG+S F+  
Sbjct: 16  DAVLSSSRYLTRQEVIRRRSRRVKQLAKCYRAHYWSLMQELKIRYREYYWKYGRSAFQED 75

Query: 741 XXXXXXXXXXXXXXXXXXXXXXGKLGLGLNENCSSGGSGIVKNRKCAFSGCKSKAMALTN 562
                                   LGLG+ EN    G  +   ++CA SGCKSKAMALT 
Sbjct: 76  EKREGEGVEGTGENLNGHGKLG--LGLGIGEN----GFDV---KRCAVSGCKSKAMALTR 126

Query: 561 YCHLHILLDTKQKLYKACNYIVKSQHTGPVHCGKPILRSTEPSLCSVHFEKAQKHVTRAL 382
           +CH HIL D+KQKLYK C++++KS   GPV CGKPILRST PSLC +HF+KA++ V  AL
Sbjct: 127 FCHPHILSDSKQKLYKGCSFVIKSVQAGPVLCGKPILRSTVPSLCPIHFQKAERQVNNAL 186

Query: 381 KKAGLNISSASKLAPKFHVIVAESVRHINMKRREKGGTTVSTAVVKEE 238
           KKAGLN +S+SKLAPKFHVIVAE V  I  KRR     +V+   +KEE
Sbjct: 187 KKAGLNAASSSKLAPKFHVIVAEYVHQIQTKRRAAQRASVNKVEIKEE 234


>ref|XP_002334422.1| predicted protein [Populus trichocarpa] gi|222870384|gb|EEF07515.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  231 bits (588), Expect = 3e-58
 Identities = 114/222 (51%), Positives = 152/222 (68%)
 Frame = -1

Query: 948 PFTLDELQEDLILSKSEYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYYWN 769
           P  L    +D +LS++ ++TRQE+++RR  +LK   K ++D+YWALME+ ++++REYYW 
Sbjct: 32  PSPLSPTLKDQVLSRATHITRQELLKRRSYKLKQLSKCFKDHYWALMEELKIQYREYYWE 91

Query: 768 YGKSPFKXXXXXXXXXXXXXXXXXXXXXXXXGKLGLGLNENCSSGGSGIVKNRKCAFSGC 589
           YG SPFK                         K G+ + EN ++  S +  N +C F GC
Sbjct: 92  YGVSPFKEDHQNTLQKQEQQ------------KQGV-IGEN-NTNVSDLKSNHRCLFVGC 137

Query: 588 KSKAMALTNYCHLHILLDTKQKLYKACNYIVKSQHTGPVHCGKPILRSTEPSLCSVHFEK 409
           K KAMALT++CHLHIL D KQKLYK C Y++KS   GP+ CGKPILRST PSLC++H +K
Sbjct: 138 KLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRSTAPSLCTIHVQK 197

Query: 408 AQKHVTRALKKAGLNISSASKLAPKFHVIVAESVRHINMKRR 283
           AQKHVT+AL+KAGLN+SS+SKLAPKFHVIV E VR I  +R+
Sbjct: 198 AQKHVTQALRKAGLNVSSSSKLAPKFHVIVTEYVRQIQFRRK 239


>ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|222837262|gb|EEE75641.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  230 bits (587), Expect = 4e-58
 Identities = 119/251 (47%), Positives = 156/251 (62%), Gaps = 12/251 (4%)
 Frame = -1

Query: 948 PFTLDELQEDLILSKSEYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYYWN 769
           P  L    +D +LS++ ++TRQE+++RR  +LK   K ++D+YWALME+ ++++REYYW 
Sbjct: 45  PSPLSPTLKDQVLSRATHITRQELLKRRSYKLKQLSKCFKDHYWALMEELKIQYREYYWE 104

Query: 768 YGKSPFKXXXXXXXXXXXXXXXXXXXXXXXXGKLGLGLNENCSSGG------------SG 625
           YG SPFK                          +G+   EN  SG             S 
Sbjct: 105 YGVSPFKEDQNTLQKQEQQKQGGG---------IGVLERENEESGANIEVIGENNTNVSD 155

Query: 624 IVKNRKCAFSGCKSKAMALTNYCHLHILLDTKQKLYKACNYIVKSQHTGPVHCGKPILRS 445
           +  N +C F GCK KAMALT++CHLHIL D KQKLYK C Y++KS   GP+ CGKPILRS
Sbjct: 156 LKSNHRCLFVGCKLKAMALTSFCHLHILSDAKQKLYKPCGYVIKSAQAGPITCGKPILRS 215

Query: 444 TEPSLCSVHFEKAQKHVTRALKKAGLNISSASKLAPKFHVIVAESVRHINMKRREKGGTT 265
           T PSLC++H +KAQKHVT+AL+KAGLN+SS+SKLAPKFHVIV E VR I  +R+      
Sbjct: 216 TAPSLCTIHVQKAQKHVTQALRKAGLNVSSSSKLAPKFHVIVTEYVRQIQFRRKAAERGN 275

Query: 264 VSTAVVKEENA 232
            S  + KE  A
Sbjct: 276 RSKVMDKEVTA 286


>ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 248

 Score =  227 bits (579), Expect = 4e-57
 Identities = 117/228 (51%), Positives = 148/228 (64%)
 Frame = -1

Query: 921 DLILSKSEYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYYWNYGKSPFKXX 742
           D +LS S YLTRQEVIRRR RR+K   K Y  +YW+LM++ ++++REYYW YG+S F+  
Sbjct: 16  DAVLSSSRYLTRQEVIRRRSRRVKQLSKCYRAHYWSLMQELKIRYREYYWKYGRSAFQED 75

Query: 741 XXXXXXXXXXXXXXXXXXXXXXGKLGLGLNENCSSGGSGIVKNRKCAFSGCKSKAMALTN 562
                                   LGLG+ EN    G  +   ++CA SGCKSKAMALT 
Sbjct: 76  EKREGEGVEGTGENLNGHGKLG--LGLGIGEN----GFDV---KRCAVSGCKSKAMALTR 126

Query: 561 YCHLHILLDTKQKLYKACNYIVKSQHTGPVHCGKPILRSTEPSLCSVHFEKAQKHVTRAL 382
           +CH HIL D+KQKLYK C++++KS   GPV CGKPILRST PSLC +HF+KA++ V  AL
Sbjct: 127 FCHPHILSDSKQKLYKGCSFVIKSVQAGPVLCGKPILRSTVPSLCPIHFQKAERQVNNAL 186

Query: 381 KKAGLNISSASKLAPKFHVIVAESVRHINMKRREKGGTTVSTAVVKEE 238
           KKAGLN +S+SKLAPKFHVIVAE V  I  KRR     +    ++  E
Sbjct: 187 KKAGLNAASSSKLAPKFHVIVAEYVHQIQTKRRAAQRASADAMILSYE 234