BLASTX nr result

ID: Coptis24_contig00010275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010275
         (1602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275413.2| PREDICTED: uncharacterized protein LOC100254...   523   e-146
emb|CBI21541.3| unnamed protein product [Vitis vinifera]              499   e-139
ref|XP_004142045.1| PREDICTED: crossover junction endonuclease E...   483   e-134
ref|XP_002530263.1| conserved hypothetical protein [Ricinus comm...   480   e-133
ref|XP_003524287.1| PREDICTED: uncharacterized protein LOC100813...   471   e-130

>ref|XP_002275413.2| PREDICTED: uncharacterized protein LOC100254360 [Vitis vinifera]
          Length = 678

 Score =  523 bits (1347), Expect = e-146
 Identities = 281/479 (58%), Positives = 341/479 (71%), Gaps = 20/479 (4%)
 Frame = +1

Query: 88   AGVSGLICLESDNESEDGGQRKFSKESEN--------------ISSDFGFGSLSPGFGDD 225
            A +S LICLESDNESE+G  R   KE+EN              +SS F   + SPG  ++
Sbjct: 106  AEISRLICLESDNESENGIGRGNLKENENETTCVDSNVLKVSDLSSQFVEPACSPGSVNE 165

Query: 226  AVLSEH------FSENEISEVYGNNEEENVPTEQVGNAVKQAHNKLVEADEGKNIRKDEA 387
              +         F E++I +V  ++++ENV  EQ  + +KQ     +E +  K  R D A
Sbjct: 166  TWMYRDGCNVPTFLEDDIHQVEDHSDKENVGLEQKDDVLKQ--KSTIEVNAEKKKRMDRA 223

Query: 388  MAKKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKFALKSIV 567
            M  K                                               GK ALKSIV
Sbjct: 224  MGTKNQKKEERIRLMEEKKLKKQEEKLQKAALKAEAAELKKLQKEKQKWEKGKLALKSIV 283

Query: 568  AEIDTKVVELGSIGGHLLTRFADKGVSYRITSNPIERSIVWTLSVPDEVSELSSKQMEIA 747
            A+IDTKV+ELGSIGGHLL+RFA+KG+++R+TSNPI RSIVWT++VP+++S+LS + MEI 
Sbjct: 284  AQIDTKVIELGSIGGHLLSRFAEKGLTFRVTSNPIARSIVWTMTVPEQISQLSPEGMEIP 343

Query: 748  YVLLVYEADEFCNLVINESLMRHVSGVQSRYSSYTVCYLTNKLMSYINKREQGQYKNQGN 927
            YVLL+YEA+EFCNLV NESLM HV GV+S Y S+TVCYLTN+LM+YI++REQG YKN  N
Sbjct: 344  YVLLIYEAEEFCNLVTNESLMDHVLGVRSHYPSHTVCYLTNRLMAYIHRREQGHYKNPTN 403

Query: 928  ANKWKRPPVEEVLSKLTTSFARVHSRQCRDEAELADHVVGLTCSLANCQFRKKLTRLSIN 1107
            ++ W+RPPVEEVLSKLTT F RVHSRQC DEAELA+HVVGLTCSLA+CQFRKKLTRLS+N
Sbjct: 404  SSSWRRPPVEEVLSKLTTHFLRVHSRQCIDEAELAEHVVGLTCSLASCQFRKKLTRLSVN 463

Query: 1108 ANGANVPKDFIDRDLIKKNVWMKALVAIPKVQPRCAVAIWKKYPTMKSLLSAYMDTSKSV 1287
            ANG+ +PKD  DR+LIKK+VW+KALVAIPKVQPR A+AIWKKYPTMKSLL  YMD SKSV
Sbjct: 464  ANGSLIPKDSTDRNLIKKSVWLKALVAIPKVQPRFAIAIWKKYPTMKSLLRVYMDPSKSV 523

Query: 1288 HEKEFLLKDIPTEGLLGNEDRRVGEICSKRIYRILMAQNGNIKTDDVELGADFFRS*SS 1464
            HEKEFLLKD+ TEGLLG EDRR+GE+CSKR+YRILMAQ+GN+KTDDVE GADFFR  SS
Sbjct: 524  HEKEFLLKDLTTEGLLG-EDRRLGEVCSKRVYRILMAQSGNMKTDDVEDGADFFRHQSS 581


>emb|CBI21541.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score =  499 bits (1286), Expect = e-139
 Identities = 256/407 (62%), Positives = 308/407 (75%)
 Frame = +1

Query: 244  FSENEISEVYGNNEEENVPTEQVGNAVKQAHNKLVEADEGKNIRKDEAMAKKTXXXXXXX 423
            F E++I +V  ++++ENV  EQ  + +KQ     +E +  K  R D AM  K        
Sbjct: 40   FLEDDIHQVEDHSDKENVGLEQKDDVLKQ--KSTIEVNAEKKKRMDRAMGTKNQKKEERI 97

Query: 424  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKFALKSIVAEIDTKVVELGS 603
                                                   GK ALKSIVA+IDTKV+ELGS
Sbjct: 98   RLMEEKKLKKQEEKLQKAALKAEAAELKKLQKEKQKWEKGKLALKSIVAQIDTKVIELGS 157

Query: 604  IGGHLLTRFADKGVSYRITSNPIERSIVWTLSVPDEVSELSSKQMEIAYVLLVYEADEFC 783
            IGGHLL+RFA+KG+++R+TSNPI RSIVWT++VP+++S+LS + MEI YVLL+YEA+EFC
Sbjct: 158  IGGHLLSRFAEKGLTFRVTSNPIARSIVWTMTVPEQISQLSPEGMEIPYVLLIYEAEEFC 217

Query: 784  NLVINESLMRHVSGVQSRYSSYTVCYLTNKLMSYINKREQGQYKNQGNANKWKRPPVEEV 963
            NLV NESLM HV GV+S Y S+TVCYLTN+LM+YI++REQG YKN  N++ W+RPPVEEV
Sbjct: 218  NLVTNESLMDHVLGVRSHYPSHTVCYLTNRLMAYIHRREQGHYKNPTNSSSWRRPPVEEV 277

Query: 964  LSKLTTSFARVHSRQCRDEAELADHVVGLTCSLANCQFRKKLTRLSINANGANVPKDFID 1143
            LSKLTT F RVHSRQC DEAELA+HVVGLTCSLA+CQFRKKLTRLS+NANG+ +PKD  D
Sbjct: 278  LSKLTTHFLRVHSRQCIDEAELAEHVVGLTCSLASCQFRKKLTRLSVNANGSLIPKDSTD 337

Query: 1144 RDLIKKNVWMKALVAIPKVQPRCAVAIWKKYPTMKSLLSAYMDTSKSVHEKEFLLKDIPT 1323
            R+LIKK+VW+KALVAIPKVQPR A+AIWKKYPTMKSLL  YMD SKSVHEKEFLLKD+ T
Sbjct: 338  RNLIKKSVWLKALVAIPKVQPRFAIAIWKKYPTMKSLLRVYMDPSKSVHEKEFLLKDLTT 397

Query: 1324 EGLLGNEDRRVGEICSKRIYRILMAQNGNIKTDDVELGADFFRS*SS 1464
            EGLLG EDRR+GE+CSKR+YRILMAQ+GN+KTDDVE GADFFR  SS
Sbjct: 398  EGLLG-EDRRLGEVCSKRVYRILMAQSGNMKTDDVEDGADFFRHQSS 443


>ref|XP_004142045.1| PREDICTED: crossover junction endonuclease EME1B-like [Cucumis
            sativus] gi|449487947|ref|XP_004157880.1| PREDICTED:
            crossover junction endonuclease EME1B-like [Cucumis
            sativus]
          Length = 563

 Score =  483 bits (1243), Expect = e-134
 Identities = 264/477 (55%), Positives = 323/477 (67%), Gaps = 21/477 (4%)
 Frame = +1

Query: 88   AGVSGLICLESDNESEDGGQRKFSKESE----------NISSDFGFGSLSPG-------- 213
            AG+SGLICLESDNESE   Q+K  ++SE          NI +   F S   G        
Sbjct: 97   AGISGLICLESDNESESDSQKKKCEQSEWIGSDCYEMKNIGASLPFDSAGSGSSLGNDDL 156

Query: 214  --FGDDAVLSEHFSENEISEVYGNNEEENVPTEQVGNAVKQAHNKL-VEADEGKNIRKDE 384
                 D   S    +++I +V+   EE+NV  EQ  N++K    K   E    K   KD+
Sbjct: 157  QEISGDMKHSTFGRDDDIYQVHDYPEEDNVGMEQNDNSMKTTGRKANAEKVTRKKATKDD 216

Query: 385  AMAKKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKFALKSI 564
             ++                                                 GK ALKSI
Sbjct: 217  KIS-----------LMEEKKKKKELEKLQKAAQKAEAAEMKKMQKEKQKWEKGKLALKSI 265

Query: 565  VAEIDTKVVELGSIGGHLLTRFADKGVSYRITSNPIERSIVWTLSVPDEVSELSSKQMEI 744
            VAEID KVVELGSIGGHLLTRFA+KG+++RI SNPIERSI+WT++VP+ +S  SSK +EI
Sbjct: 266  VAEIDAKVVELGSIGGHLLTRFAEKGITFRIKSNPIERSILWTMNVPEHISA-SSKGLEI 324

Query: 745  AYVLLVYEADEFCNLVINESLMRHVSGVQSRYSSYTVCYLTNKLMSYINKREQGQYKNQG 924
            +YVLLVYEA+ FC L+  ES M HV+ VQSRY S+T+CYLTN+LM++INKREQ +YKN  
Sbjct: 325  SYVLLVYEAENFCELLSKESFMDHVARVQSRYPSHTICYLTNRLMAFINKREQEKYKNLT 384

Query: 925  NANKWKRPPVEEVLSKLTTSFARVHSRQCRDEAELADHVVGLTCSLANCQFRKKLTRLSI 1104
             +N W RPPVEE L+KLTT F +V SRQC DEAE+ADH+VGLTC LA+CQFRKKLT LS+
Sbjct: 385  CSNDWIRPPVEEELAKLTTHFVKVRSRQCVDEAEVADHIVGLTCGLASCQFRKKLTHLSV 444

Query: 1105 NANGANVPKDFIDRDLIKKNVWMKALVAIPKVQPRCAVAIWKKYPTMKSLLSAYMDTSKS 1284
            NANG+ +PKD +DR++IKK++W+KALVAIPKVQPR A+A+WKKYPTMKSLLS YMD  KS
Sbjct: 445  NANGSIIPKDCVDRNMIKKSLWLKALVAIPKVQPRFAIAVWKKYPTMKSLLSVYMDPRKS 504

Query: 1285 VHEKEFLLKDIPTEGLLGNEDRRVGEICSKRIYRILMAQNGNIKTDDVELGADFFRS 1455
            VHEKEFLLKD+  EGLLG +DRR+GEICSKR+YRILMAQNGN++TDDVE GAD FRS
Sbjct: 505  VHEKEFLLKDLTIEGLLG-DDRRLGEICSKRVYRILMAQNGNMRTDDVEEGADLFRS 560


>ref|XP_002530263.1| conserved hypothetical protein [Ricinus communis]
            gi|223530229|gb|EEF32133.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 400

 Score =  480 bits (1236), Expect = e-133
 Identities = 236/304 (77%), Positives = 269/304 (88%)
 Frame = +1

Query: 541  GKFALKSIVAEIDTKVVELGSIGGHLLTRFADKGVSYRITSNPIERSIVWTLSVPDEVSE 720
            GKFALKSI+ E+D KVVE GSIGGHLLTRF++KGV+YR+TSN IE+SIVWT+SVP+ +S+
Sbjct: 94   GKFALKSIIVELDIKVVEQGSIGGHLLTRFSEKGVTYRLTSNSIEKSIVWTMSVPEHISQ 153

Query: 721  LSSKQMEIAYVLLVYEADEFCNLVINESLMRHVSGVQSRYSSYTVCYLTNKLMSYINKRE 900
            LS K  E+ YVLLVYEA+EFCNLVINESL+ HVS ++SRY SYTVCYLTN+LM+YINKRE
Sbjct: 154  LSPKGTEVQYVLLVYEAEEFCNLVINESLLDHVSRIRSRYPSYTVCYLTNRLMAYINKRE 213

Query: 901  QGQYKNQGNANKWKRPPVEEVLSKLTTSFARVHSRQCRDEAELADHVVGLTCSLANCQFR 1080
            + QYKN  N N W+RPP+EEVL+KLTT F RVH R C DEAELA+HVVGLTCSLA+CQFR
Sbjct: 214  KEQYKNPENDNGWRRPPIEEVLAKLTTHFVRVHYRHCTDEAELAEHVVGLTCSLASCQFR 273

Query: 1081 KKLTRLSINANGANVPKDFIDRDLIKKNVWMKALVAIPKVQPRCAVAIWKKYPTMKSLLS 1260
             KLTRLS+NANGA VPKD +DR+LIKK+ W+KALVAIPKVQPR AVAIWKKYPTMKSLL 
Sbjct: 274  NKLTRLSVNANGALVPKDSVDRNLIKKSTWLKALVAIPKVQPRFAVAIWKKYPTMKSLLR 333

Query: 1261 AYMDTSKSVHEKEFLLKDIPTEGLLGNEDRRVGEICSKRIYRILMAQNGNIKTDDVELGA 1440
             YMD SKSVHEKEFLL+D+ TEGLLG E RRVG ICSKRIYRILMAQ+G+IKTDDVE GA
Sbjct: 334  VYMDPSKSVHEKEFLLEDLTTEGLLGGE-RRVGRICSKRIYRILMAQSGSIKTDDVEDGA 392

Query: 1441 DFFR 1452
            DFFR
Sbjct: 393  DFFR 396


>ref|XP_003524287.1| PREDICTED: uncharacterized protein LOC100813276 [Glycine max]
          Length = 624

 Score =  471 bits (1213), Expect = e-130
 Identities = 256/464 (55%), Positives = 323/464 (69%), Gaps = 10/464 (2%)
 Frame = +1

Query: 88   AGVSGLICLESDNESEDGGQRKFSKESENISSDFGFGSLSPGFGDDAVLSEHFSENEISE 267
            +G S  ICLESDNE E+ G     +  EN   +  + S S GFG          E  IS 
Sbjct: 170  SGSSPHICLESDNELENCGM---GERGENELRESRWTSNSMGFGSSP-------ERHIS- 218

Query: 268  VYGNNEEENVPTEQVGN-AVKQAHNKLVEADEG-KNIRKDE--------AMAKKTXXXXX 417
             +GN  +  +P + + N A  Q  N  ++ +E   NI+K +        A+ K       
Sbjct: 219  -WGNATQTEMPGDDLSNPASSQVENMNMQQEENANNIKKSKVSAKNTTKAVGKTKMTKEE 277

Query: 418  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKFALKSIVAEIDTKVVEL 597
                                                     GKFA+KSIVAEID KVVEL
Sbjct: 278  RSRLMEEKKLQKEQEKLKKAALKAEAAELKKIEKEKQKWEKGKFAMKSIVAEIDAKVVEL 337

Query: 598  GSIGGHLLTRFADKGVSYRITSNPIERSIVWTLSVPDEVSELSSKQMEIAYVLLVYEADE 777
            GSIGGHLLTRFA+KG++Y ITSNPI  SI+W++ VP+ +S+LS++++EI Y+LLVYEAD+
Sbjct: 338  GSIGGHLLTRFAEKGLTYHITSNPITGSILWSMKVPEHISQLSTERIEIPYILLVYEADK 397

Query: 778  FCNLVINESLMRHVSGVQSRYSSYTVCYLTNKLMSYINKREQGQYKNQGNANKWKRPPVE 957
            FCNLV+N+SL   +S +QS Y +YTVCYLTN+L++YINK+EQ +YKN  N + W+RPPVE
Sbjct: 398  FCNLVMNDSLFDQLSSIQSLYPAYTVCYLTNRLLAYINKKEQEKYKNPENNSCWRRPPVE 457

Query: 958  EVLSKLTTSFARVHSRQCRDEAELADHVVGLTCSLANCQFRKKLTRLSINANGANVPKDF 1137
            EVL+KLTT+F +VHSRQC DEAELA+HVVGLTCSLA+CQFRKKL+RLS+NANGA +PKD+
Sbjct: 458  EVLAKLTTNFNKVHSRQCADEAELAEHVVGLTCSLASCQFRKKLSRLSVNANGALIPKDY 517

Query: 1138 IDRDLIKKNVWMKALVAIPKVQPRCAVAIWKKYPTMKSLLSAYMDTSKSVHEKEFLLKDI 1317
            +DR+LIKK++W+KALVA+PKVQPR A+AI KKYPTMKSLLS YMD SKS HEKEFLL+D+
Sbjct: 518  VDRNLIKKSLWLKALVAMPKVQPRFAIAIGKKYPTMKSLLSVYMDPSKSEHEKEFLLQDL 577

Query: 1318 PTEGLLGNEDRRVGEICSKRIYRILMAQNGNIKTDDVELGADFF 1449
             TEGLLG  DRR+GE+CSKR+YRILMAQ+G I+TDDVE GADFF
Sbjct: 578  MTEGLLGG-DRRLGEVCSKRVYRILMAQSGCIRTDDVENGADFF 620


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