BLASTX nr result

ID: Coptis24_contig00010271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010271
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265066.1| PREDICTED: uncharacterized protein LOC100260...   303   3e-80
ref|XP_002303945.1| predicted protein [Populus trichocarpa] gi|2...   302   7e-80
ref|XP_002871245.1| hypothetical protein ARALYDRAFT_487519 [Arab...   280   3e-73
ref|XP_002299186.1| predicted protein [Populus trichocarpa] gi|2...   280   3e-73
ref|NP_196316.1| uncharacterized protein [Arabidopsis thaliana] ...   279   5e-73

>ref|XP_002265066.1| PREDICTED: uncharacterized protein LOC100260942 [Vitis vinifera]
          Length = 249

 Score =  303 bits (777), Expect = 3e-80
 Identities = 142/224 (63%), Positives = 180/224 (80%)
 Frame = -1

Query: 701 PLQSPARPQISLREXXXXXXXXXSGRLXXXXXXXXXXFPIITPTCKMPVSLPGGRLNDGH 522
           P ++P+ P+++L++         S +L          FPII+P CK+PV L   RLND H
Sbjct: 26  PEKTPSHPKVALQQPSHKKASLKSTKLFRHFRSVFRSFPIISPACKIPVLLHNSRLNDVH 85

Query: 521 IHGGTRMTGTLYGCRKARINLSIQENPRCLPMLVLELAIPTAKLLQEMGSGLVRIALECE 342
           IHGGTRMTGTL+G RK R++L+IQE+PRC P+ +LE+AIPT+KLLQE+G GLVRIALECE
Sbjct: 86  IHGGTRMTGTLFGHRKGRVSLAIQESPRCFPIFLLEMAIPTSKLLQELGLGLVRIALECE 145

Query: 341 KHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLHAVSMGAGVLPSDSADM 162
           K P E+ KL++EP+W +YCNG+K GY VKR+ N +DLN MQ+LHAVSMGAGVLPS++ D+
Sbjct: 146 KRPEEKIKLMDEPIWNLYCNGRKMGYAVKREANAEDLNVMQMLHAVSMGAGVLPSEAIDL 205

Query: 161 PDGELTYMRAYFERVVGSKDSETFYMMNPDGNSGPELSIFFVRI 30
           PDGELTYMRA+F+RV+GSKDSET+YMMNPD N+GPELSIFFVRI
Sbjct: 206 PDGELTYMRAHFQRVIGSKDSETYYMMNPDSNTGPELSIFFVRI 249


>ref|XP_002303945.1| predicted protein [Populus trichocarpa] gi|222841377|gb|EEE78924.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  302 bits (773), Expect = 7e-80
 Identities = 148/233 (63%), Positives = 182/233 (78%), Gaps = 2/233 (0%)
 Frame = -1

Query: 722 STAATEMPLQSPARPQISLREXXXXXXXXXSGRLXXXXXXXXXXFPIITPTCKMPVSLPG 543
           +T + ++   SP RP ISL++           ++          FPII P CK+PVSL G
Sbjct: 29  TTPSGKVNPMSPVRPTISLQQPNSKKGSSKHNKIFRRVRAVFRSFPIIAPACKIPVSLHG 88

Query: 542 GRLNDGHIHGGTRMTGTLYGCRKARINLSIQENPRCLPMLVLELAIPTAKLLQEMGSGLV 363
            RL+DGH+HGGTRMTGTL+G RKARINL+IQE+P  LP+L+LEL IPT KLLQ+MG GLV
Sbjct: 89  NRLHDGHVHGGTRMTGTLFGHRKARINLAIQESPGSLPVLLLELTIPTGKLLQDMGVGLV 148

Query: 362 RIALECEKHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLHAVSMGAGVL 183
           RIALECEK P E+TK+ +EP+WTM+CNG+K+GY VKR+P  +DLN MQ+LH VSMGAGV+
Sbjct: 149 RIALECEKKPHEKTKIEDEPIWTMFCNGRKSGYAVKREPTDEDLNVMQILHVVSMGAGVI 208

Query: 182 PS-DSADMP-DGELTYMRAYFERVVGSKDSETFYMMNPDGNSGPELSIFFVRI 30
           P+ D AD P DGELTYMRA+FERV GSKDSET+YM+NPDGN+GPELS+FFVRI
Sbjct: 209 PTGDGADQPADGELTYMRAFFERVAGSKDSETYYMLNPDGNNGPELSLFFVRI 261


>ref|XP_002871245.1| hypothetical protein ARALYDRAFT_487519 [Arabidopsis lyrata subsp.
           lyrata] gi|297317082|gb|EFH47504.1| hypothetical protein
           ARALYDRAFT_487519 [Arabidopsis lyrata subsp. lyrata]
          Length = 259

 Score =  280 bits (716), Expect = 3e-73
 Identities = 143/250 (57%), Positives = 178/250 (71%), Gaps = 20/250 (8%)
 Frame = -1

Query: 719 TAATEMPLQSP--------ARPQISLREXXXXXXXXXSG--RLXXXXXXXXXXFPIITPT 570
           T  T  PL SP         RP+I+L +         S   +L           PI++P 
Sbjct: 12  TPTTMSPLGSPKSKKSTATVRPEITLEQPSGRNKTAGSKSTKLFRRVRSVFRSLPIMSPM 71

Query: 569 CKMPVSLPGGRLNDGHIHGGTRMTGTLYGCRKARINLSIQENPRCLPMLVLELAIPTAKL 390
           CK PV   GGRL++ H+HGGTR+TGTL+G RK R+NL++QENPR LP+L+LELAIPT KL
Sbjct: 72  CKFPVG--GGRLHENHVHGGTRVTGTLFGYRKTRVNLAVQENPRSLPILLLELAIPTGKL 129

Query: 389 LQEMGSGLVRIALECEKHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLH 210
           LQ++G GLVRIALECEK P+E+TK+++EP+W +YCNGKK+GYGVKR P  +DL  MQ+LH
Sbjct: 130 LQDLGVGLVRIALECEKKPSEKTKIIDEPIWALYCNGKKSGYGVKRQPTEEDLVVMQMLH 189

Query: 209 AVSMGAGVLPSDS----------ADMPDGELTYMRAYFERVVGSKDSETFYMMNPDGNSG 60
           AVSMGAGVLP  S              +G+LTYMRA+FERV+GS+DSET+YMMNPDGNSG
Sbjct: 190 AVSMGAGVLPVSSGATEQSGGGGGGQQEGDLTYMRAHFERVIGSRDSETYYMMNPDGNSG 249

Query: 59  PELSIFFVRI 30
           PELSIFFVR+
Sbjct: 250 PELSIFFVRV 259


>ref|XP_002299186.1| predicted protein [Populus trichocarpa] gi|222846444|gb|EEE83991.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  280 bits (716), Expect = 3e-73
 Identities = 139/223 (62%), Positives = 172/223 (77%), Gaps = 2/223 (0%)
 Frame = -1

Query: 692 SPARPQISLREXXXXXXXXXSGRLXXXXXXXXXXFPIITPTCKMPVSLPGGRLNDGHIHG 513
           SP +P ISL +           ++          FPIITP CK+PVSL G RL+DGH+ G
Sbjct: 6   SPIQPAISLHQPNGKKGSSKHNKIFRRVRAVFRSFPIITPACKIPVSLHGNRLHDGHV-G 64

Query: 512 GTRMTGTLYGCRKARINLSIQENPRCLPMLVLELAIPTAKLLQEMGSGLVRIALECEKHP 333
           GTRMTGTL+G RKAR++L+IQE+P  LP+L+LEL IPT KLLQ+MG GLVRIALECEK  
Sbjct: 65  GTRMTGTLFGHRKARVSLAIQESPGSLPILLLELTIPTGKLLQDMGVGLVRIALECEKKA 124

Query: 332 AERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLHAVSMGAGVLPS-DSADMP- 159
            ++TK+ +EP+WT++CNG+K GY VKR+P  +DLN MQ L  VSMGAGV+P+ D AD P 
Sbjct: 125 NDKTKIEDEPIWTLFCNGRKCGYAVKREPTDEDLNVMQTLRVVSMGAGVIPTGDGADQPT 184

Query: 158 DGELTYMRAYFERVVGSKDSETFYMMNPDGNSGPELSIFFVRI 30
           DGELTYMRA+FERV GSKDSET+YM+NPDGN+GPELS+FFVR+
Sbjct: 185 DGELTYMRAFFERVAGSKDSETYYMLNPDGNNGPELSLFFVRL 227


>ref|NP_196316.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9759555|dbj|BAB11157.1| unnamed protein product
           [Arabidopsis thaliana] gi|71905551|gb|AAZ52753.1|
           expressed protein [Arabidopsis thaliana]
           gi|332003713|gb|AED91096.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 261

 Score =  279 bits (714), Expect = 5e-73
 Identities = 143/251 (56%), Positives = 178/251 (70%), Gaps = 21/251 (8%)
 Frame = -1

Query: 719 TAATEMPLQSP--------ARPQISLREXXXXXXXXXSG--RLXXXXXXXXXXFPIITPT 570
           T  T  PL SP         RP+I+L +         S   +L           PI++P 
Sbjct: 12  TPTTMSPLGSPKSKKSTATVRPEITLEQPSGRNKTTGSKSTKLFRRVRSVFRSLPIMSPM 71

Query: 569 CKMPVSLPGGRLNDGHIHGGTRMTGTLYGCRKARINLSIQENPRCLPMLVLELAIPTAKL 390
           CK PV   GGRL++ H+HGGTR+TGTL+G RK R+NL++QENPR LP+L+LELAIPT KL
Sbjct: 72  CKFPVG-GGGRLHENHVHGGTRVTGTLFGYRKTRVNLAVQENPRSLPILLLELAIPTGKL 130

Query: 389 LQEMGSGLVRIALECEKHPAERTKLLEEPLWTMYCNGKKTGYGVKRDPNGDDLNTMQLLH 210
           LQ++G GLVRIALECEK P+E+TK+++EP+W +YCNGKK+GYGVKR P  +DL  MQ+LH
Sbjct: 131 LQDLGVGLVRIALECEKKPSEKTKIIDEPIWALYCNGKKSGYGVKRQPTEEDLVVMQMLH 190

Query: 209 AVSMGAGVLPSDS-----------ADMPDGELTYMRAYFERVVGSKDSETFYMMNPDGNS 63
           AVSMGAGVLP  S               +G+LTYMRA+FERV+GS+DSET+YMMNPDGNS
Sbjct: 191 AVSMGAGVLPVSSGAITEQSGGGGGGQQEGDLTYMRAHFERVIGSRDSETYYMMNPDGNS 250

Query: 62  GPELSIFFVRI 30
           GPELSIFFVR+
Sbjct: 251 GPELSIFFVRV 261


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