BLASTX nr result

ID: Coptis24_contig00010270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010270
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|2...   155   1e-35
gb|ABK94628.1| unknown [Populus trichocarpa]                          154   2e-35
ref|XP_002529307.1| conserved hypothetical protein [Ricinus comm...   151   2e-34
ref|XP_002284580.1| PREDICTED: uncharacterized protein LOC100245...   149   1e-33
emb|CBI23587.3| unnamed protein product [Vitis vinifera]              149   1e-33

>ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|222856284|gb|EEE93831.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  155 bits (393), Expect = 1e-35
 Identities = 79/146 (54%), Positives = 99/146 (67%)
 Frame = +2

Query: 110 MGFTSFAGRVLFASIFIISAWQQFNEFGVDGGPAAKALKPKFHVVTNHVSSKFGVEVPEI 289
           M FTSF GRVLFAS+FI+SA+Q+FNEFGVDGGPAAKALKPKF V T+HV S  G++VPEI
Sbjct: 1   MAFTSFLGRVLFASVFILSAYQEFNEFGVDGGPAAKALKPKFGVFTSHVQSHAGIQVPEI 60

Query: 290 EIKHLVXXXXXXXXXXXXXXXXXSSLGAYLLLLHQIAASPILFELYNNGIDKNDFLEHAL 469
           EIKHLV                 SSLGAYLL++HQ+ A PIL++ YN   ++ +F +  +
Sbjct: 61  EIKHLVSAAIFLKGIGGILFIIGSSLGAYLLIIHQLIAIPILYDFYNYDSEEKEFNQLFI 120

Query: 470 KYSQSXXXXXXXXXXXXMKNSIPRRQ 547
           K++Q+            MKNS PRRQ
Sbjct: 121 KFTQNMALYGALLFFIGMKNSFPRRQ 146


>gb|ABK94628.1| unknown [Populus trichocarpa]
          Length = 157

 Score =  154 bits (390), Expect = 2e-35
 Identities = 78/146 (53%), Positives = 99/146 (67%)
 Frame = +2

Query: 110 MGFTSFAGRVLFASIFIISAWQQFNEFGVDGGPAAKALKPKFHVVTNHVSSKFGVEVPEI 289
           M FTSF GRVLFAS++I+SA+Q+FNEFGVDGGPAAKALKPKF V T+HV S  G++VPEI
Sbjct: 1   MAFTSFLGRVLFASVYILSAYQEFNEFGVDGGPAAKALKPKFGVFTSHVQSHAGIQVPEI 60

Query: 290 EIKHLVXXXXXXXXXXXXXXXXXSSLGAYLLLLHQIAASPILFELYNNGIDKNDFLEHAL 469
           EIKHLV                 SSLGAYLL++HQ+ A PIL++ YN   ++ +F +  +
Sbjct: 61  EIKHLVSAAIFLKGIGGILFIIGSSLGAYLLIIHQLIAIPILYDFYNYDSEEKEFNQLFI 120

Query: 470 KYSQSXXXXXXXXXXXXMKNSIPRRQ 547
           K++Q+            MKNS PRRQ
Sbjct: 121 KFTQNMALYGALLFFIGMKNSFPRRQ 146


>ref|XP_002529307.1| conserved hypothetical protein [Ricinus communis]
           gi|223531231|gb|EEF33076.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score =  151 bits (381), Expect = 2e-34
 Identities = 76/146 (52%), Positives = 93/146 (63%)
 Frame = +2

Query: 110 MGFTSFAGRVLFASIFIISAWQQFNEFGVDGGPAAKALKPKFHVVTNHVSSKFGVEVPEI 289
           M F SF GRVLFAS+FI+SAWQ+FN+FGVDGGPAAK+  PKF+V + HVSS  G +VP +
Sbjct: 1   MAFASFVGRVLFASVFILSAWQEFNDFGVDGGPAAKSFAPKFNVFSRHVSSNTGFQVPPV 60

Query: 290 EIKHLVXXXXXXXXXXXXXXXXXSSLGAYLLLLHQIAASPILFELYNNGIDKNDFLEHAL 469
           EIKHLV                 SS GAYLLLLHQ   +PIL++ YN   DK +F +   
Sbjct: 61  EIKHLVAAAIAVKGLGGLLFIFGSSFGAYLLLLHQAVVTPILYDFYNYDADKKEFHQLFT 120

Query: 470 KYSQSXXXXXXXXXXXXMKNSIPRRQ 547
           K++Q+            MKNSIPRRQ
Sbjct: 121 KFTQNLALFGALLFFIGMKNSIPRRQ 146


>ref|XP_002284580.1| PREDICTED: uncharacterized protein LOC100245894 [Vitis vinifera]
          Length = 230

 Score =  149 bits (375), Expect = 1e-33
 Identities = 75/146 (51%), Positives = 95/146 (65%)
 Frame = +2

Query: 110 MGFTSFAGRVLFASIFIISAWQQFNEFGVDGGPAAKALKPKFHVVTNHVSSKFGVEVPEI 289
           M F SF GRVLFAS+FI+SAWQ+FNEFGVDGGPA ++L PK  V + HVS+  GV+VPE+
Sbjct: 74  MAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPAVESLAPKLDVFSKHVSANVGVQVPEV 133

Query: 290 EIKHLVXXXXXXXXXXXXXXXXXSSLGAYLLLLHQIAASPILFELYNNGIDKNDFLEHAL 469
           EIK+LV                 SSLGA+LLLLHQ    PIL++ YN  +DK +F+   L
Sbjct: 134 EIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLHQAIVIPILYDFYNYDVDKKEFVVLFL 193

Query: 470 KYSQSXXXXXXXXXXXXMKNSIPRRQ 547
           K++Q+            MKNS+PRRQ
Sbjct: 194 KFTQNLALFGALLFFIGMKNSMPRRQ 219


>emb|CBI23587.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score =  149 bits (375), Expect = 1e-33
 Identities = 75/146 (51%), Positives = 95/146 (65%)
 Frame = +2

Query: 110 MGFTSFAGRVLFASIFIISAWQQFNEFGVDGGPAAKALKPKFHVVTNHVSSKFGVEVPEI 289
           M F SF GRVLFAS+FI+SAWQ+FNEFGVDGGPA ++L PK  V + HVS+  GV+VPE+
Sbjct: 1   MAFVSFVGRVLFASVFILSAWQEFNEFGVDGGPAVESLAPKLDVFSKHVSANVGVQVPEV 60

Query: 290 EIKHLVXXXXXXXXXXXXXXXXXSSLGAYLLLLHQIAASPILFELYNNGIDKNDFLEHAL 469
           EIK+LV                 SSLGA+LLLLHQ    PIL++ YN  +DK +F+   L
Sbjct: 61  EIKNLVAASIALKGLGGLLFIFGSSLGAHLLLLHQAIVIPILYDFYNYDVDKKEFVVLFL 120

Query: 470 KYSQSXXXXXXXXXXXXMKNSIPRRQ 547
           K++Q+            MKNS+PRRQ
Sbjct: 121 KFTQNLALFGALLFFIGMKNSMPRRQ 146


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