BLASTX nr result

ID: Coptis24_contig00010265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010265
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521564.1| syntaxin, putative [Ricinus communis] gi|223...    84   2e-24
ref|XP_002327686.1| predicted protein [Populus trichocarpa] gi|2...    83   9e-24
ref|XP_002265408.2| PREDICTED: syntaxin-112 [Vitis vinifera]           81   1e-23
emb|CBI17497.3| unnamed protein product [Vitis vinifera]               81   1e-23
ref|XP_002884123.1| 4-phosphopantetheine adenylyltransferase [Ar...    84   3e-22

>ref|XP_002521564.1| syntaxin, putative [Ricinus communis] gi|223539242|gb|EEF40835.1|
           syntaxin, putative [Ricinus communis]
          Length = 493

 Score = 84.3 bits (207), Expect(2) = 2e-24
 Identities = 40/50 (80%), Positives = 46/50 (92%)
 Frame = +1

Query: 286 HRSFLKASAELAKERVVVGVCDGPMLINKKFANLIEPIEKRMRNVEGYIK 435
           HR FLKASAELA+ER+VVGVCDGPML NK+FA+LI+PIE+RM NVE YIK
Sbjct: 35  HRLFLKASAELARERIVVGVCDGPMLTNKQFADLIQPIEERMHNVEIYIK 84



 Score = 53.1 bits (126), Expect(2) = 2e-24
 Identities = 26/37 (70%), Positives = 28/37 (75%)
 Frame = +2

Query: 104 EETLKNSNSSPTPKLYGAVVVGGTFDRLHDGHRSFLK 214
           EE + N   SP P  YGAVV+GGTFDRLHDGHR FLK
Sbjct: 5   EEPMVNHKISP-PNSYGAVVLGGTFDRLHDGHRLFLK 40


>ref|XP_002327686.1| predicted protein [Populus trichocarpa] gi|222836771|gb|EEE75164.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 83.2 bits (204), Expect(2) = 9e-24
 Identities = 38/50 (76%), Positives = 45/50 (90%)
 Frame = +1

Query: 286 HRSFLKASAELAKERVVVGVCDGPMLINKKFANLIEPIEKRMRNVEGYIK 435
           HR FLKA+AELAK+R+V+GVCDGPML NK+FA LI+PIE+RM NVE YIK
Sbjct: 35  HRLFLKAAAELAKDRIVIGVCDGPMLKNKQFAELIQPIEERMHNVENYIK 84



 Score = 52.0 bits (123), Expect(2) = 9e-24
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = +2

Query: 104 EETLKNSNSSPTPKLYGAVVVGGTFDRLHDGHRSFLK 214
           EE++ N+  SP P  Y AVV+GGTFDRLHDGHR FLK
Sbjct: 5   EESVVNTKLSP-PNSYSAVVLGGTFDRLHDGHRLFLK 40


>ref|XP_002265408.2| PREDICTED: syntaxin-112 [Vitis vinifera]
          Length = 493

 Score = 81.3 bits (199), Expect(2) = 1e-23
 Identities = 38/50 (76%), Positives = 44/50 (88%)
 Frame = +1

Query: 286 HRSFLKASAELAKERVVVGVCDGPMLINKKFANLIEPIEKRMRNVEGYIK 435
           HR FLKASAELA++R+V+GVCDGPML  K+FA LIEPIEKRM +VE YIK
Sbjct: 37  HRFFLKASAELARDRIVIGVCDGPMLSKKQFAGLIEPIEKRMHSVEEYIK 86



 Score = 53.1 bits (126), Expect(2) = 1e-23
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +2

Query: 104 EETLKNSNSSPTPKLYGAVVVGGTFDRLHDGHRSFLK 214
           +++  +SN SP P  YGAVV+GGTFDRLHDGHR FLK
Sbjct: 7   KDSFADSNLSP-PNSYGAVVLGGTFDRLHDGHRFFLK 42


>emb|CBI17497.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score = 81.3 bits (199), Expect(2) = 1e-23
 Identities = 38/50 (76%), Positives = 44/50 (88%)
 Frame = +1

Query: 286 HRSFLKASAELAKERVVVGVCDGPMLINKKFANLIEPIEKRMRNVEGYIK 435
           HR FLKASAELA++R+V+GVCDGPML  K+FA LIEPIEKRM +VE YIK
Sbjct: 37  HRFFLKASAELARDRIVIGVCDGPMLSKKQFAGLIEPIEKRMHSVEEYIK 86



 Score = 53.1 bits (126), Expect(2) = 1e-23
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = +2

Query: 104 EETLKNSNSSPTPKLYGAVVVGGTFDRLHDGHRSFLK 214
           +++  +SN SP P  YGAVV+GGTFDRLHDGHR FLK
Sbjct: 7   KDSFADSNLSP-PNSYGAVVLGGTFDRLHDGHRFFLK 42


>ref|XP_002884123.1| 4-phosphopantetheine adenylyltransferase [Arabidopsis lyrata subsp.
           lyrata] gi|297329963|gb|EFH60382.1| 4-phosphopantetheine
           adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
          Length = 176

 Score = 83.6 bits (205), Expect(2) = 3e-22
 Identities = 37/50 (74%), Positives = 46/50 (92%)
 Frame = +1

Query: 286 HRSFLKASAELAKERVVVGVCDGPMLINKKFANLIEPIEKRMRNVEGYIK 435
           HR FLKA+AELA++R+VVGVCDGPML NK+FA +I+PIE+RMRNVE Y+K
Sbjct: 31  HRMFLKAAAELARDRIVVGVCDGPMLTNKQFAEMIQPIEERMRNVEKYVK 80



 Score = 46.6 bits (109), Expect(2) = 3e-22
 Identities = 22/33 (66%), Positives = 26/33 (78%)
 Frame = +2

Query: 116 KNSNSSPTPKLYGAVVVGGTFDRLHDGHRSFLK 214
           ++S  SP    +GAVV+GGTFDRLHDGHR FLK
Sbjct: 5   EDSKMSPVNS-FGAVVLGGTFDRLHDGHRMFLK 36


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