BLASTX nr result

ID: Coptis24_contig00010258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010258
         (1973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274072.1| PREDICTED: putative E3 ubiquitin-protein lig...   304   e-128
gb|ABG37641.1| auxin-regulated protein-like protein [Populus tri...   272   e-118
emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]   206   e-101
emb|CBI23653.3| unnamed protein product [Vitis vinifera]              198   4e-99
ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|2...   194   6e-98

>ref|XP_002274072.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35 [Vitis
            vinifera] gi|302143289|emb|CBI21850.3| unnamed protein
            product [Vitis vinifera]
          Length = 497

 Score =  304 bits (778), Expect(2) = e-128
 Identities = 186/459 (40%), Positives = 241/459 (52%), Gaps = 1/459 (0%)
 Frame = -3

Query: 1389 TIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSXXXXXXXXXXXLELAMY 1210
            TIE+HIC FSGWLREL+GPGF++  AP LLS+KIWVV++P G            LEL +Y
Sbjct: 134  TIENHICLFSGWLRELHGPGFLKALAPQLLSRKIWVVIIPSG---FNNPSKPLRLELVIY 190

Query: 1209 NSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKSTKKKFRLASSDEGERQQLQWLSN 1030
            ++ QDA+P T IAL    +EEPKF+Q  P + IFDKS K +++LAS++EG++QQL+WL N
Sbjct: 191  SNFQDAQPCTVIALGNVNIEEPKFHQSDPALIIFDKSNKTRYKLASANEGDKQQLRWLYN 250

Query: 1029 ACRGIPQVMHPTVLTNAHTSVVPPTMPPPNGDDVELAMAVNASLLLAREEMPQIMDS-HS 853
            ACRGIPQV+   +L +A  S VP +      +  ELAMAV AS+  A  + P ++ S   
Sbjct: 251  ACRGIPQVLPTPMLHDARPS-VPASQTAT--EAAELAMAVGASIQSAAVDQPVLLSSTRL 307

Query: 852  SPEVSNAIGWGSSADISSHNGWLXXXXXXXXXXXXXGWLDEPAEEAYNGWGXXXXXXXSN 673
              E S+  GWG+  D +SH GW              GW DE     +NG G        N
Sbjct: 308  GSEASSTNGWGNPVDNTSHGGWSLDGTPTHSASSSSGWADESKRGEFNGLGVPESRLIRN 367

Query: 672  RTEQNISAPGTTSVSLGNSANTXXXXXXXXXXXSAFSSKESCGGWLNNQSENVQNGWGMS 493
            +T+ N +                                       NN  + VQ      
Sbjct: 368  QTQLNKTQ--------------------------------------NNIPQVVQT----- 384

Query: 492  ETGSRSNQNNSTSVPLTHATPQTASVPSAPPVPEGADDGPIQYPSIDFSPVDWTMPNMDN 313
                 SN N   + P           PSAPP+PE   +GP+ YP ID SPVD ++P  + 
Sbjct: 385  -----SNTNPVLASP----------APSAPPIPEALTEGPVYYPPIDLSPVDLSVPAAEY 429

Query: 312  KDSRTSQTKEDGGASSSCVICLDAPVEGACVPCGHMAGCXXXXXXXXXXXXXXXXXXXXX 133
              + TS+TK D G SSSCVIC +AP+EGAC+PCGHM                        
Sbjct: 430  DAAGTSKTK-DKGDSSSCVICWEAPIEGACIPCGHM------------------------ 464

Query: 132  XXXXHMAGCMSCLNGIKAKEWGCPVCRAKIKQVIRLYAV 16
                  AGCM+CLN IKAK+  CPVCRAKI+QVI+LYAV
Sbjct: 465  ------AGCMTCLNEIKAKKGVCPVCRAKIQQVIKLYAV 497



 Score =  182 bits (462), Expect(2) = e-128
 Identities = 94/132 (71%), Positives = 105/132 (79%)
 Frame = -2

Query: 1834 MGLQQSKEALLYQQVIDGNIEAIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 1655
            MG +QSK+ LLYQ V  GNIEAIKAL REGASLEWFD E KT LIVAC +  L  VA+TL
Sbjct: 8    MGGRQSKDELLYQHVATGNIEAIKALCREGASLEWFDSEAKTPLIVACMDSNLIMVAQTL 67

Query: 1654 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 1475
            I LGANVNAYRPG  AGT LHHA K+GLDQTVKLLLS GAN L  NDD +T ++VAR+ G
Sbjct: 68   IDLGANVNAYRPGREAGTPLHHAAKRGLDQTVKLLLSKGANALVRNDDGQTSLDVARING 127

Query: 1474 HCNVVRTIESHI 1439
            + NVVRTIE+HI
Sbjct: 128  YINVVRTIENHI 139


>gb|ABG37641.1| auxin-regulated protein-like protein [Populus trichocarpa]
          Length = 499

 Score =  272 bits (696), Expect(2) = e-118
 Identities = 172/461 (37%), Positives = 224/461 (48%), Gaps = 3/461 (0%)
 Frame = -3

Query: 1389 TIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSXXXXXXXXXXXLELAMY 1210
            TIESHIC+F+GWLRE YGPGF+  FAP  LS+KIW  V+P GS            EL +Y
Sbjct: 134  TIESHICYFTGWLREFYGPGFLRAFAPQFLSRKIWAAVIPQGSSNPMTPKKL---ELVIY 190

Query: 1209 NSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKSTKKKFRLASSDEGERQQLQWLSN 1030
             S QD +PRT IALW A++EEP F +P P + IFD+STK +++LAS++EG++QQL WL +
Sbjct: 191  PSSQDVQPRTVIALWNAEIEEPNFNRPDPELTIFDQSTKTQYKLASANEGDKQQLHWLYD 250

Query: 1029 ACRGIPQVMHPTVLTNAHTSVVPPTMPPPNGDDVELAMAV-NASLLLAREEMPQIMDSHS 853
            AC GIPQVM P +  N  T+ VP      + + V  AMA+   S+    E+ P   ++H 
Sbjct: 251  ACSGIPQVMLPPMYGNPPTT-VPVVGHHTSAEAVGSAMAIGGGSIQSTTEDNPLHPNTHQ 309

Query: 852  SPEVSNAIGWGSSADISSHNGWLXXXXXXXXXXXXXGWLDEPAEEAYNGWGXXXXXXXSN 673
            S EV NA GW       SHN W              GW+ E  +E +NG          +
Sbjct: 310  SSEVINANGWEDPVRGDSHNRWGVTVASTHSEARSSGWMGEAPKEDHNGCAVPNMGPSGS 369

Query: 672  R--TEQNISAPGTTSVSLGNSANTXXXXXXXXXXXSAFSSKESCGGWLNNQSENVQNGWG 499
            +   +     P  +  S GN+A                                      
Sbjct: 370  QDHVQTRYDIPPVSETSGGNTA-------------------------------------- 391

Query: 498  MSETGSRSNQNNSTSVPLTHATPQTASVPSAPPVPEGADDGPIQYPSIDFSPVDWTMPNM 319
                          SVP   + P        P   E  D GPI YPS DFS +D ++P +
Sbjct: 392  --------------SVPSAPSAP--------PIPDEELDAGPIHYPSFDFSLLDLSVPAI 429

Query: 318  DNKDSRTSQTKEDGGASSSCVICLDAPVEGACVPCGHMAGCXXXXXXXXXXXXXXXXXXX 139
            +   S TS   + GG SSSC+IC +APVEGAC+PCGHM                      
Sbjct: 430  ELGASVTSDVNK-GGTSSSCIICWEAPVEGACIPCGHM---------------------- 466

Query: 138  XXXXXXHMAGCMSCLNGIKAKEWGCPVCRAKIKQVIRLYAV 16
                    AGCM+CL+ IKAK+  CP+CR+ I QV RLYAV
Sbjct: 467  --------AGCMTCLSEIKAKKGVCPICRSNINQVTRLYAV 499



 Score =  181 bits (458), Expect(2) = e-118
 Identities = 89/132 (67%), Positives = 108/132 (81%)
 Frame = -2

Query: 1834 MGLQQSKEALLYQQVIDGNIEAIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 1655
            M  +QSK+ LLYQ  I GN++A+KAL  EGA LEW D++GKT LIVAC +  LY+VAK L
Sbjct: 8    MTQKQSKDELLYQLAIAGNVDAVKALCSEGAILEWIDRDGKTPLIVACMDSGLYNVAKVL 67

Query: 1654 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 1475
            I++GANVNAYRPG HAGT LHHAVK+GL+QTVKLLLS GAN L  NDD +T ++VAR+KG
Sbjct: 68   IEMGANVNAYRPGRHAGTPLHHAVKRGLEQTVKLLLSSGANALVRNDDCQTALDVARIKG 127

Query: 1474 HCNVVRTIESHI 1439
            + N+VRTIESHI
Sbjct: 128  NINIVRTIESHI 139


>emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]
          Length = 500

 Score =  206 bits (525), Expect(2) = e-101
 Identities = 110/223 (49%), Positives = 138/223 (61%), Gaps = 25/223 (11%)
 Frame = -3

Query: 1386 IESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSXXXXXXXXXXXLELAMYN 1207
            IESHIC FSGWLRE YGPGF+EV AP  +S+K+WVV+LPCGS            ELA+Y+
Sbjct: 128  IESHICLFSGWLREFYGPGFLEVLAPQWVSRKVWVVILPCGSRKPTKPFKL---ELAIYS 184

Query: 1206 SLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKST----------------------- 1096
            SLQDA+PRTTIALWKA ++E KF  P P V I D ST                       
Sbjct: 185  SLQDAQPRTTIALWKANMDEAKFEDPDPAVIILDNSTISRGRRRRRCYTSREARCKPRAL 244

Query: 1095 -KKKFRLASSDEGERQQLQWLSNACRGIPQVMH-PTVLTNAHTSVVPPTMPPPNGDDVEL 922
             + + +LA   + + QQLQW  NAC+GIPQ MH P  L NA T  VPPT  PP  +D+EL
Sbjct: 245  RQTQIKLAPEKKSDSQQLQWFCNACKGIPQAMHPPAFLHNAQTPAVPPT-APPTAEDLEL 303

Query: 921  AMAVNASLLLAREEMPQIMDSHSSPEVSNAIGWGSSADISSHN 793
            AMA+NAS+  A +E P ++DS SS E   +  W +S +I++HN
Sbjct: 304  AMAINASIQSAMQEGPPLLDSPSSFENGASTSWNNSVNITNHN 346



 Score =  191 bits (486), Expect(2) = e-101
 Identities = 94/132 (71%), Positives = 109/132 (82%)
 Frame = -2

Query: 1834 MGLQQSKEALLYQQVIDGNIEAIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 1655
            MG QQSK+ LL+QQV+ GN+E IKAL REGA LEW D+EGKT LIVAC   +L++VAKTL
Sbjct: 1    MGQQQSKDELLHQQVVYGNVEGIKALSREGAGLEWTDREGKTPLIVACMFSELFNVAKTL 60

Query: 1654 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 1475
            I+LGANVNAYRPG HAGT LHHA KKGL++TV LLLSHGAN L +NDD +T ++VAR KG
Sbjct: 61   IELGANVNAYRPGRHAGTPLHHAAKKGLEETVNLLLSHGANALVMNDDCQTALDVARAKG 120

Query: 1474 HCNVVRTIESHI 1439
            H  VVR IESHI
Sbjct: 121  HSRVVRVIESHI 132



 Score =  147 bits (372), Expect = 8e-33
 Identities = 81/162 (50%), Positives = 96/162 (59%), Gaps = 3/162 (1%)
 Frame = -3

Query: 492 ETGSRSNQNNSTSVPLTHAT--PQTASVPSAPPVP-EGADDGPIQYPSIDFSPVDWTMPN 322
           E G  +N      +  TH    P  AS  SAPP+  E  DDGP+QYPSID SPVD T P 
Sbjct: 371 EAGPSTNSTQHIQIE-THIPDIPVQASTASAPPIADEVVDDGPVQYPSIDSSPVDLTSPA 429

Query: 321 MDNKDSRTSQTKEDGGASSSCVICLDAPVEGACVPCGHMAGCXXXXXXXXXXXXXXXXXX 142
            +   + + Q+KE GGA+SSCVICLDAP+EGAC+PCGHM                     
Sbjct: 430 FETSAAASEQSKE-GGAASSCVICLDAPIEGACIPCGHM--------------------- 467

Query: 141 XXXXXXXHMAGCMSCLNGIKAKEWGCPVCRAKIKQVIRLYAV 16
                    AGCMSCLN IKAK+WGCPVCRAKI QV++LY+V
Sbjct: 468 ---------AGCMSCLNEIKAKKWGCPVCRAKIDQVVKLYSV 500


>emb|CBI23653.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  198 bits (504), Expect(2) = 4e-99
 Identities = 107/216 (49%), Positives = 132/216 (61%), Gaps = 25/216 (11%)
 Frame = -3

Query: 1386 IESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSXXXXXXXXXXXLELAMYN 1207
            IESHIC FSGWLRE YGPGF+EV AP  +S+K+WVV+LPCGS            ELA+Y+
Sbjct: 128  IESHICLFSGWLREFYGPGFLEVLAPQWVSRKVWVVILPCGSRKPTKPFKL---ELAIYS 184

Query: 1206 SLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKST----------------------- 1096
            SLQDA+PRTTIALWKA ++E KF  P P V I D ST                       
Sbjct: 185  SLQDAQPRTTIALWKANMDEAKFEDPDPAVIILDNSTISRGRRRRRCYTSREARCKPRAL 244

Query: 1095 -KKKFRLASSDEGERQQLQWLSNACRGIPQVMH-PTVLTNAHTSVVPPTMPPPNGDDVEL 922
             + + +LA   + + QQLQW  NAC+GIPQ MH P  L NA T  VPPT  PP  +D+EL
Sbjct: 245  RQTQIKLAPEKKSDSQQLQWFCNACKGIPQAMHPPAFLHNAQTPAVPPT-APPTAEDLEL 303

Query: 921  AMAVNASLLLAREEMPQIMDSHSSPEVSNAIGWGSS 814
            AMA+NAS+  A +E P ++DS SS E   +  W +S
Sbjct: 304  AMAINASIQSAMQEGPPLLDSPSSFENGASTSWNNS 339



 Score =  191 bits (486), Expect(2) = 4e-99
 Identities = 94/132 (71%), Positives = 109/132 (82%)
 Frame = -2

Query: 1834 MGLQQSKEALLYQQVIDGNIEAIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 1655
            MG QQSK+ LL+QQV+ GN+E IKAL REGA LEW D+EGKT LIVAC   +L++VAKTL
Sbjct: 1    MGQQQSKDELLHQQVVYGNVEGIKALSREGAGLEWTDREGKTPLIVACMFSELFNVAKTL 60

Query: 1654 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 1475
            I+LGANVNAYRPG HAGT LHHA KKGL++TV LLLSHGAN L +NDD +T ++VAR KG
Sbjct: 61   IELGANVNAYRPGRHAGTPLHHAAKKGLEETVNLLLSHGANALVMNDDCQTALDVARAKG 120

Query: 1474 HCNVVRTIESHI 1439
            H  VVR IESHI
Sbjct: 121  HSRVVRVIESHI 132


>ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|222833076|gb|EEE71553.1|
            predicted protein [Populus trichocarpa]
          Length = 444

 Score =  194 bits (492), Expect(2) = 6e-98
 Identities = 99/191 (51%), Positives = 127/191 (66%)
 Frame = -3

Query: 1386 IESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSXXXXXXXXXXXLELAMYN 1207
            IESHIC FSGWLRE YGPGF+EV AP L+S+ IWVVVLP GS            ELA+Y+
Sbjct: 128  IESHICLFSGWLREFYGPGFLEVLAPRLVSRNIWVVVLPTGSRSPRMPYKL---ELAIYS 184

Query: 1206 SLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKSTKKKFRLASSDEGERQQLQWLSNA 1027
             LQDA+P T IALWKA +E+PKF+   P V I D STK + +LA ++E ++QQLQW  +A
Sbjct: 185  RLQDAQPHTIIALWKANLEQPKFHHADPTVMIVDNSTKTRLKLAPANERDKQQLQWFCDA 244

Query: 1026 CRGIPQVMHPTVLTNAHTSVVPPTMPPPNGDDVELAMAVNASLLLAREEMPQIMDSHSSP 847
            C+GIPQVMHP    +   ++      PP+ +D E+AMA+NAS+  A  E P I D+HSS 
Sbjct: 245  CKGIPQVMHPPEFLSKSQNLAVQATAPPSDEDPEIAMAINASIQSAMVEQP-ISDTHSST 303

Query: 846  EVSNAIGWGSS 814
              S++    SS
Sbjct: 304  GASSSTSCVSS 314



 Score =  192 bits (488), Expect(2) = 6e-98
 Identities = 97/132 (73%), Positives = 108/132 (81%)
 Frame = -2

Query: 1834 MGLQQSKEALLYQQVIDGNIEAIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 1655
            MG QQSK+ LLYQQV   NIE IK L REGA LEW DKEGKT LIVAC NPQL++VAKTL
Sbjct: 1    MGQQQSKDELLYQQVNCSNIEGIKNLCREGARLEWIDKEGKTPLIVACLNPQLFNVAKTL 60

Query: 1654 IQLGANVNAYRPGGHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVEVARVKG 1475
            I+LGANVNAYRPG + G  LHHA K+GL+ TVKLLLSHGAN L +NDD +TP+EVAR KG
Sbjct: 61   IELGANVNAYRPGRNGGAPLHHAAKRGLENTVKLLLSHGANALMMNDDCQTPLEVARAKG 120

Query: 1474 HCNVVRTIESHI 1439
            + NVVR IESHI
Sbjct: 121  YGNVVRAIESHI 132



 Score =  143 bits (361), Expect = 1e-31
 Identities = 82/162 (50%), Positives = 95/162 (58%), Gaps = 4/162 (2%)
 Frame = -3

Query: 489 TGSRSNQN---NSTSVPLTHATPQTASVPSAPP-VPEGADDGPIQYPSIDFSPVDWTMPN 322
           +GS + Q    NS+   +  AT    SVPSAPP V E  +DGPI YPSID SP+D +   
Sbjct: 314 SGSSTQQTKILNSSVADVQTATDAQDSVPSAPPIVDELIEDGPIHYPSIDSSPLDISSLP 373

Query: 321 MDNKDSRTSQTKEDGGASSSCVICLDAPVEGACVPCGHMAGCXXXXXXXXXXXXXXXXXX 142
           ++N    T + KEDGG SSSCVICLDAPVEGAC+PCGH                      
Sbjct: 374 IENLPENTGEKKEDGG-SSSCVICLDAPVEGACIPCGH---------------------- 410

Query: 141 XXXXXXXHMAGCMSCLNGIKAKEWGCPVCRAKIKQVIRLYAV 16
                   M GCMSCL  IKAK+WGCPVCRA I QV+RLYAV
Sbjct: 411 --------MVGCMSCLKEIKAKKWGCPVCRATINQVVRLYAV 444


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