BLASTX nr result

ID: Coptis24_contig00010257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010257
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34793.3| unnamed protein product [Vitis vinifera]              202   1e-49
ref|XP_002514464.1| conserved hypothetical protein [Ricinus comm...   200   4e-49
ref|XP_002281705.1| PREDICTED: uncharacterized protein LOC100256...   183   7e-44
ref|XP_003598328.1| hypothetical protein MTR_3g010350 [Medicago ...   179   1e-42
ref|XP_004147986.1| PREDICTED: uncharacterized protein LOC101212...   174   3e-41

>emb|CBI34793.3| unnamed protein product [Vitis vinifera]
          Length = 829

 Score =  202 bits (513), Expect = 1e-49
 Identities = 105/174 (60%), Positives = 125/174 (71%), Gaps = 3/174 (1%)
 Frame = -2

Query: 1063 GYPGITPFEGTASGVASLVRHLPAGSPATLYCISSLVEKANILCSRAMEEDADMWKNWQG 884
            GYP ITPF+G ASGVA+LVRHLPAGS A  Y I +L+EKAN LC   + ++ D+WKNWQG
Sbjct: 656  GYPDITPFDGMASGVAALVRHLPAGSSAIFYTIHTLIEKANNLCREVLTQEVDLWKNWQG 715

Query: 883  DSEPCKKXXXXXXXXXXXXXXXXLPNLMKLLAQFTLQLPKDGQNMVLDEIHTLVAESDDV 704
            +S+PCKK                LPNL+KLLAQ  +QLPKDGQNMVL+EI++ VAESDDV
Sbjct: 716  ESQPCKKMLELLLRLISLVDVQVLPNLLKLLAQLIVQLPKDGQNMVLNEIYSQVAESDDV 775

Query: 703  TRKPTLVSWVQSLSFLCSQTTSSTMARK---FKRDDASVGSTDNLSLNRISARL 551
            TRKPTLVSWVQSLS+LC+Q TS +   K    + + AS  S   LS NRISARL
Sbjct: 776  TRKPTLVSWVQSLSYLCAQATSGSAYSKSLESEENSASALSMGPLSWNRISARL 829


>ref|XP_002514464.1| conserved hypothetical protein [Ricinus communis]
            gi|223546460|gb|EEF47960.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 829

 Score =  200 bits (509), Expect = 4e-49
 Identities = 101/172 (58%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
 Frame = -2

Query: 1063 GYPGITPFEGTASGVASLVRHLPAGSPATLYCISSLVEKANILCSRAMEEDADMWKNWQG 884
            GYPGITPFEG ASGVA+LVR+LPAGSPAT YCI S+VEK N+L   +  ++AD+WK+WQG
Sbjct: 658  GYPGITPFEGMASGVAALVRNLPAGSPATFYCIHSIVEKENMLLRDSFTQEADLWKHWQG 717

Query: 883  DSEPCKKXXXXXXXXXXXXXXXXLPNLMKLLAQFTLQLPKDGQNMVLDEIHTLVAESDDV 704
            +SEPCKK                LPNLMKLLAQ  ++LPKDGQN+VL+E++  VA+SDDV
Sbjct: 718  ESEPCKKILELLLRLISLVDIQVLPNLMKLLAQLIIKLPKDGQNVVLNELYAQVADSDDV 777

Query: 703  TRKPTLVSWVQSLSFLCSQTTS-STMARKFKRDDASVGSTDNLSLNRISARL 551
            TRKPTLVSW+QS+S+LCSQ  S ST ++K + ++ S+   D    +RI+ARL
Sbjct: 778  TRKPTLVSWLQSVSYLCSQAISRSTASKKNEGEENSLSLQDPSDWDRINARL 829


>ref|XP_002281705.1| PREDICTED: uncharacterized protein LOC100256489 [Vitis vinifera]
          Length = 819

 Score =  183 bits (464), Expect = 7e-44
 Identities = 102/174 (58%), Positives = 119/174 (68%), Gaps = 3/174 (1%)
 Frame = -2

Query: 1063 GYPGITPFEGTASGVASLVRHLPAGSPATLYCISSLVEKANILCSRAMEEDADMWKNWQG 884
            GYP ITPF+G ASGVA+LVRHLPAGS A  Y I +L+EKAN LC           +NWQG
Sbjct: 656  GYPDITPFDGMASGVAALVRHLPAGSSAIFYTIHTLIEKANNLCR----------ENWQG 705

Query: 883  DSEPCKKXXXXXXXXXXXXXXXXLPNLMKLLAQFTLQLPKDGQNMVLDEIHTLVAESDDV 704
            +S+PCKK                LPNL+KLLAQ  +QLPKDGQNMVL+EI++ VAESDDV
Sbjct: 706  ESQPCKKMLELLLRLISLVDVQVLPNLLKLLAQLIVQLPKDGQNMVLNEIYSQVAESDDV 765

Query: 703  TRKPTLVSWVQSLSFLCSQTTSSTMARK---FKRDDASVGSTDNLSLNRISARL 551
            TRKPTLVSWVQSLS+LC+Q TS +   K    + + AS  S   LS NRISARL
Sbjct: 766  TRKPTLVSWVQSLSYLCAQATSGSAYSKSLESEENSASALSMGPLSWNRISARL 819


>ref|XP_003598328.1| hypothetical protein MTR_3g010350 [Medicago truncatula]
            gi|355487376|gb|AES68579.1| hypothetical protein
            MTR_3g010350 [Medicago truncatula]
          Length = 827

 Score =  179 bits (453), Expect = 1e-42
 Identities = 92/171 (53%), Positives = 113/171 (66%)
 Frame = -2

Query: 1063 GYPGITPFEGTASGVASLVRHLPAGSPATLYCISSLVEKANILCSRAMEEDADMWKNWQG 884
            GYP ITPFEG ASGV  +V+HLPAGSPAT YCI SLVEKAN LCS     +AD WK WQG
Sbjct: 663  GYPDITPFEGMASGVVGMVQHLPAGSPATFYCIHSLVEKANQLCSEVFTHEADAWKQWQG 722

Query: 883  DSEPCKKXXXXXXXXXXXXXXXXLPNLMKLLAQFTLQLPKDGQNMVLDEIHTLVAESDDV 704
            + EP KK                LPNLM+LLAQ   +LP+D QN+VL+E+++ VA+SDDV
Sbjct: 723  EPEPSKKLMDLLLRLVFLVDIQVLPNLMQLLAQLITKLPQDAQNIVLNELYSQVADSDDV 782

Query: 703  TRKPTLVSWVQSLSFLCSQTTSSTMARKFKRDDASVGSTDNLSLNRISARL 551
             RKP LVSW+QSLS+LC+  ++ + A K         S D +S  RI+A L
Sbjct: 783  VRKPMLVSWLQSLSYLCTMASNQSTASK------KNNSEDPISAGRITAHL 827


>ref|XP_004147986.1| PREDICTED: uncharacterized protein LOC101212894 [Cucumis sativus]
            gi|449524346|ref|XP_004169184.1| PREDICTED:
            uncharacterized protein LOC101230084 [Cucumis sativus]
          Length = 826

 Score =  174 bits (441), Expect = 3e-41
 Identities = 84/143 (58%), Positives = 104/143 (72%)
 Frame = -2

Query: 1063 GYPGITPFEGTASGVASLVRHLPAGSPATLYCISSLVEKANILCSRAMEEDADMWKNWQG 884
            GYPGITPFEG ASGVA+LVR+LPAGSPA  YCI SL  KA  LCS    +D D+WK WQG
Sbjct: 649  GYPGITPFEGMASGVAALVRYLPAGSPAIFYCIDSLTVKATSLCSENFMDDGDLWKTWQG 708

Query: 883  DSEPCKKXXXXXXXXXXXXXXXXLPNLMKLLAQFTLQLPKDGQNMVLDEIHTLVAESDDV 704
            D EP KK                LP+LMK LAQ  ++LP +GQN++LD++++LV+E+DDV
Sbjct: 709  DLEPSKKILDMLLRLISLVDIQVLPSLMKSLAQLIIKLPTEGQNLILDQLYSLVSEADDV 768

Query: 703  TRKPTLVSWVQSLSFLCSQTTSS 635
            TRKP LVSW+QSLS+LCS + S+
Sbjct: 769  TRKPMLVSWLQSLSYLCSLSKSA 791


Top