BLASTX nr result

ID: Coptis24_contig00010255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010255
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27315.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268...   109   3e-22
ref|XP_002512056.1| conserved hypothetical protein [Ricinus comm...    70   1e-10
ref|XP_003628745.1| hypothetical protein MTR_8g066290 [Medicago ...    67   2e-09
ref|XP_002312290.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09

>emb|CBI27315.3| unnamed protein product [Vitis vinifera]
          Length = 1177

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/106 (50%), Positives = 71/106 (66%)
 Frame = +1

Query: 76  FGFRNALVQRLLRDLVSNVNGTTEKNLSSTSLCNEACIIEPDEQFPESCTRPDLLPFLIK 255
           FGFRN  VQRLLR+LV+NVNGT E+ L S S CN A   E D + P+SCT PDLLP+L K
Sbjct: 117 FGFRNPFVQRLLRELVANVNGTAEQTLLSASFCNRASGAENDTRLPDSCTYPDLLPYLEK 176

Query: 256 PQSTRKKSRKHNTATTHTASGPERKQLQAHNVSDNAEFSITRKENQ 393
           PQ+T K+SRK       + SG   K+L+   ++DN+  S +R+ N+
Sbjct: 177 PQTTGKRSRKQKNINMKSISGSAHKRLRPRELTDNSVASSSRQRNR 222


>ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268093 [Vitis vinifera]
          Length = 1242

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/106 (50%), Positives = 71/106 (66%)
 Frame = +1

Query: 76  FGFRNALVQRLLRDLVSNVNGTTEKNLSSTSLCNEACIIEPDEQFPESCTRPDLLPFLIK 255
           FGFRN  VQRLLR+LV+NVNGT E+ L S S CN A   E D + P+SCT PDLLP+L K
Sbjct: 117 FGFRNPFVQRLLRELVANVNGTAEQTLLSASFCNRASGAENDTRLPDSCTYPDLLPYLEK 176

Query: 256 PQSTRKKSRKHNTATTHTASGPERKQLQAHNVSDNAEFSITRKENQ 393
           PQ+T K+SRK       + SG   K+L+   ++DN+  S +R+ N+
Sbjct: 177 PQTTGKRSRKQKNINMKSISGSAHKRLRPRELTDNSVASSSRQRNR 222


>ref|XP_002512056.1| conserved hypothetical protein [Ricinus communis]
           gi|223549236|gb|EEF50725.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1246

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/70 (50%), Positives = 47/70 (67%)
 Frame = +1

Query: 76  FGFRNALVQRLLRDLVSNVNGTTEKNLSSTSLCNEACIIEPDEQFPESCTRPDLLPFLIK 255
           FGFRN LVQRLLR+LV+NVNG  E++L ++  CN A  IEP  Q+ +  T  DLL  L +
Sbjct: 122 FGFRNPLVQRLLRELVANVNGIAEQSLLASIFCNGASNIEPSNQYQDPSTSSDLLSHLAR 181

Query: 256 PQSTRKKSRK 285
              T K+S++
Sbjct: 182 SHVTGKRSKR 191


>ref|XP_003628745.1| hypothetical protein MTR_8g066290 [Medicago truncatula]
           gi|355522767|gb|AET03221.1| hypothetical protein
           MTR_8g066290 [Medicago truncatula]
          Length = 1244

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
 Frame = +1

Query: 73  IFGFRNALVQRLLRDLVSNVNGTTEKNLSSTSLCNEACIIEPDEQFPESCTRPDLLPFLI 252
           +FGF+N  +QRLLR+LVS++NG  +++L S++LCNE    + D+  P   T  DLL    
Sbjct: 130 LFGFKNQFIQRLLRELVSDINGIVDRSLVSSNLCNEVSKTQHDDCHPNVGTSSDLLLSQK 189

Query: 253 KPQSTRKKSR-KHNTATTHTASGPERKQLQAHNVSD 357
           +P  TRK++R +     ++  S P+  +L     SD
Sbjct: 190 RPGVTRKRTRCELKNKESNVRSRPQSLELACSKASD 225


>ref|XP_002312290.1| predicted protein [Populus trichocarpa] gi|222852110|gb|EEE89657.1|
           predicted protein [Populus trichocarpa]
          Length = 1312

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
 Frame = +1

Query: 40  ELWTQIFLCCLI-----FGFRNALVQRLLRDLVSNVNGTTEKNLSSTSLCNEACIIEPDE 204
           ++W      C+I     FGF+N  VQRLLR+LV+NVNG  E++  S S  N +   E + 
Sbjct: 129 KIWHGKRFSCMIDGIEFFGFKNPFVQRLLRELVTNVNGIAEQSPLSPSFSNGSTGTELNN 188

Query: 205 QFPESCTRPDLLPFLIKPQSTRKKSRKHNTATTHTASGPERKQLQAHNVSDNAEFSITRK 384
           +  ++CT P+L P+L + Q   K+S+        + S    K+ +A +V   AE S +  
Sbjct: 189 RCTDACTHPNLPPYLARSQVKGKRSKSQKITNPESLSTASFKRSRAEDVMYIAEPSDSAS 248

Query: 385 ENQK 396
           +  K
Sbjct: 249 KTHK 252


Top