BLASTX nr result
ID: Coptis24_contig00010248
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010248
(1584 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002319702.1| predicted protein [Populus trichocarpa] gi|2... 305 2e-84
ref|XP_002282324.1| PREDICTED: uncharacterized protein LOC100248... 303 1e-83
ref|XP_002325408.1| predicted protein [Populus trichocarpa] gi|2... 308 5e-83
ref|XP_002525443.1| transcription factor, putative [Ricinus comm... 306 3e-82
emb|CBI29923.3| unnamed protein product [Vitis vinifera] 303 6e-80
>ref|XP_002319702.1| predicted protein [Populus trichocarpa] gi|222858078|gb|EEE95625.1|
predicted protein [Populus trichocarpa]
Length = 427
Score = 305 bits (781), Expect(2) = 2e-84
Identities = 166/235 (70%), Positives = 189/235 (80%), Gaps = 13/235 (5%)
Frame = -3
Query: 1390 MYHHNHQNGKNSYPSSRF--PERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERF 1217
MYHH+ GK+ + SSR P +H+FLQGG N GD+GLVLSTDAKPRLKW P+LHERF
Sbjct: 1 MYHHHQHQGKSIHSSSRMAIPPERHLFLQGG-NGPGDSGLVLSTDAKPRLKWTPDLHERF 59
Query: 1216 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLNKNLHGQANTGNNKAGFMA 1037
IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL+KNLHGQAN G++K G +A
Sbjct: 60 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGSSKIGTVA 119
Query: 1036 AEAGDRMCDASGA------LTTGSQTNK-----SLQISESLEMQIEVQRRLNEQLEVQRH 890
GDRM +A+ L+ GSQ NK SL SE+L+MQIEVQRRL+EQLEVQRH
Sbjct: 120 V-VGDRMPEANATHININNLSIGSQPNKILKSRSLHFSEALQMQIEVQRRLHEQLEVQRH 178
Query: 889 LQLRIEAQGKYLQSVLEKTQETLGKQKLGVCVGLEDAKVHISQLVFKLSNECLNS 725
LQLRIEAQGKYLQ+VLEK QETLG+Q LG VGLE AKV +S+LV K+S +CLNS
Sbjct: 179 LQLRIEAQGKYLQAVLEKAQETLGRQNLGT-VGLEAAKVQLSELVSKVSTQCLNS 232
Score = 36.2 bits (82), Expect(2) = 2e-84
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = -2
Query: 707 DGQTSSCEGSQKDQEIPFIRLTPFHHHTDNINDKETMGSREELQCETNEPQWCRNRNENN 528
D +SCEGSQK+QEI I + +++ + + + + LQ E +W +N
Sbjct: 259 DSCLTSCEGSQKEQEIHNIGMGLRPCNSNALLEPKEIAEEHALQ--QTELKWGEYLRDNK 316
Query: 527 LFPSCSIGKDTERMMF 480
+F + SIG +TER F
Sbjct: 317 MFLT-SIGHETERRTF 331
>ref|XP_002282324.1| PREDICTED: uncharacterized protein LOC100248614 isoform 1 [Vitis
vinifera]
Length = 418
Score = 303 bits (777), Expect(2) = 1e-83
Identities = 163/228 (71%), Positives = 189/228 (82%), Gaps = 6/228 (2%)
Frame = -3
Query: 1390 MYHHNHQNGKNSYPSSRFP--ERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERF 1217
MYHH+H GKN +PSSR P +++FLQGG N GD+GLVLSTDAKPRLKW P+LHERF
Sbjct: 1 MYHHHHHQGKNIHPSSRTPITPERNLFLQGG-NGPGDSGLVLSTDAKPRLKWTPDLHERF 59
Query: 1216 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLNKNLHGQANTGNNKAGFMA 1037
IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL+KNLHGQAN+ +K
Sbjct: 60 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSATSK----- 114
Query: 1036 AEAGDRMCDASGALTT----GSQTNKSLQISESLEMQIEVQRRLNEQLEVQRHLQLRIEA 869
G+RM +A+GAL + G+QTNKSL +SE+L+M IE QRRL+EQLEVQRHLQLRIEA
Sbjct: 115 TVVGERMPEANGALMSSPNIGNQTNKSLHLSETLQM-IEAQRRLHEQLEVQRHLQLRIEA 173
Query: 868 QGKYLQSVLEKTQETLGKQKLGVCVGLEDAKVHISQLVFKLSNECLNS 725
QGKYLQ+VLEK QETLG+Q LG VGLE AKV +S+LV K+S +CL+S
Sbjct: 174 QGKYLQAVLEKAQETLGRQNLG-AVGLEAAKVQLSELVSKVSTQCLHS 220
Score = 35.0 bits (79), Expect(2) = 1e-83
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = -2
Query: 707 DGQTSSCEGSQKDQEIP--FIRLTPFHHHTDNINDKETMGSREELQCETNEPQWCRNRNE 534
D +SCEGSQ++QEI + L P+ + + + K+T E + +WC + E
Sbjct: 246 DSCLTSCEGSQREQEIHNCGMGLRPYTNGSTPLEAKDT---AEPPGLQHTVLKWCEDTKE 302
Query: 533 NNLFPSCSIGKDTER 489
N F S S+ +D ER
Sbjct: 303 NRQFIS-SMQRDAER 316
>ref|XP_002325408.1| predicted protein [Populus trichocarpa] gi|222862283|gb|EEE99789.1|
predicted protein [Populus trichocarpa]
Length = 421
Score = 308 bits (789), Expect(2) = 5e-83
Identities = 165/228 (72%), Positives = 189/228 (82%), Gaps = 6/228 (2%)
Frame = -3
Query: 1390 MYHHNHQNGKNSYPSSR--FPERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERF 1217
MY H+ GKN + SSR P +H+FLQ G N GD+GLVLSTDAKPRLKW +LHERF
Sbjct: 1 MYQHHQHQGKNIHSSSRNSIPPERHLFLQVG-NGPGDSGLVLSTDAKPRLKWTTDLHERF 59
Query: 1216 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLNKNLHGQANTGNNKAGFMA 1037
IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL+KNLHGQAN+G+NK+G +A
Sbjct: 60 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSGSNKSGTVA 119
Query: 1036 AEAGDRMCDASGA----LTTGSQTNKSLQISESLEMQIEVQRRLNEQLEVQRHLQLRIEA 869
GDRM + + L+ GSQTNKSL SE+L++QIEVQRRL+EQLEVQRHLQLRIEA
Sbjct: 120 V-VGDRMPEVNATHINNLSIGSQTNKSLHFSEALQVQIEVQRRLHEQLEVQRHLQLRIEA 178
Query: 868 QGKYLQSVLEKTQETLGKQKLGVCVGLEDAKVHISQLVFKLSNECLNS 725
QGKYLQSVLEK QETLG+Q LG VGLE AKV +S+LV K+S++CLNS
Sbjct: 179 QGKYLQSVLEKAQETLGRQNLGT-VGLEAAKVQLSELVSKVSSKCLNS 225
Score = 28.1 bits (61), Expect(2) = 5e-83
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = -2
Query: 707 DGQTSSCEGSQKDQEIPFIRLTPFHHHTDNINDKETMGSREELQCETNEPQW-CRNRNEN 531
D +S EGSQK+QEI + ++ + + + + + LQ E +W ++ +N
Sbjct: 252 DSCLTSIEGSQKEQEIHNTGMGLRPYNGNALLEPKVIAGEHALQ--QTELKWPGEDQRDN 309
Query: 530 NLFPSCSIGKDTERMMF 480
+F S S+ DTER F
Sbjct: 310 KMFLS-SMRNDTERRTF 325
>ref|XP_002525443.1| transcription factor, putative [Ricinus communis]
gi|223535256|gb|EEF36933.1| transcription factor,
putative [Ricinus communis]
Length = 419
Score = 306 bits (783), Expect(2) = 3e-82
Identities = 162/228 (71%), Positives = 186/228 (81%), Gaps = 6/228 (2%)
Frame = -3
Query: 1390 MYHHNHQNGKNSYPSSRF--PERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERF 1217
MYHH+ GK+ + SSR P +H+FLQGG N GD+GLVLSTDAKPRLKW +LHE F
Sbjct: 1 MYHHHQHQGKSVHSSSRMSIPPERHLFLQGG-NGPGDSGLVLSTDAKPRLKWTSDLHEHF 59
Query: 1216 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLNKNLHGQANTGNNKAGFMA 1037
IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL+KNLHGQAN+G+NK G
Sbjct: 60 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSGSNKIG-TG 118
Query: 1036 AEAGDRMCDAS----GALTTGSQTNKSLQISESLEMQIEVQRRLNEQLEVQRHLQLRIEA 869
A GDR+ + + L+ G+QTNK L I E+L+MQIEVQRRL+EQLEVQRHLQLRIEA
Sbjct: 119 AVVGDRISETNVTHINNLSMGTQTNKGLHIGEALQMQIEVQRRLHEQLEVQRHLQLRIEA 178
Query: 868 QGKYLQSVLEKTQETLGKQKLGVCVGLEDAKVHISQLVFKLSNECLNS 725
QGKYLQSVLEK QETLG+Q LG +GLE AKV +S+LV K+S +CLNS
Sbjct: 179 QGKYLQSVLEKAQETLGRQNLG-SIGLEAAKVQLSELVSKVSTQCLNS 225
Score = 27.7 bits (60), Expect(2) = 3e-82
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = -2
Query: 707 DGQTSSCEGSQKDQEI--PFIRLTPFHHHTDNINDKETMGSREELQCETNEPQWCRNRNE 534
D +SCEGSQK+QEI + L P++ + E+ E E +W + +
Sbjct: 252 DSCLTSCEGSQKEQEIHNTGMGLRPYNGNA----LLESKDITEGHVLHQTELKWSEDLKD 307
Query: 533 NNLFPSCSIGKDTERMMF 480
N +F S +G + R F
Sbjct: 308 NKMFLS-PLGNNAARRNF 324
>emb|CBI29923.3| unnamed protein product [Vitis vinifera]
Length = 305
Score = 303 bits (777), Expect = 6e-80
Identities = 163/228 (71%), Positives = 189/228 (82%), Gaps = 6/228 (2%)
Frame = -3
Query: 1390 MYHHNHQNGKNSYPSSRFP--ERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERF 1217
MYHH+H GKN +PSSR P +++FLQGG N GD+GLVLSTDAKPRLKW P+LHERF
Sbjct: 1 MYHHHHHQGKNIHPSSRTPITPERNLFLQGG-NGPGDSGLVLSTDAKPRLKWTPDLHERF 59
Query: 1216 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLNKNLHGQANTGNNKAGFMA 1037
IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL+KNLHGQAN+ +K
Sbjct: 60 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSATSK----- 114
Query: 1036 AEAGDRMCDASGALTT----GSQTNKSLQISESLEMQIEVQRRLNEQLEVQRHLQLRIEA 869
G+RM +A+GAL + G+QTNKSL +SE+L+M IE QRRL+EQLEVQRHLQLRIEA
Sbjct: 115 TVVGERMPEANGALMSSPNIGNQTNKSLHLSETLQM-IEAQRRLHEQLEVQRHLQLRIEA 173
Query: 868 QGKYLQSVLEKTQETLGKQKLGVCVGLEDAKVHISQLVFKLSNECLNS 725
QGKYLQ+VLEK QETLG+Q LG VGLE AKV +S+LV K+S +CL+S
Sbjct: 174 QGKYLQAVLEKAQETLGRQNLG-AVGLEAAKVQLSELVSKVSTQCLHS 220