BLASTX nr result

ID: Coptis24_contig00010248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010248
         (1584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319702.1| predicted protein [Populus trichocarpa] gi|2...   305   2e-84
ref|XP_002282324.1| PREDICTED: uncharacterized protein LOC100248...   303   1e-83
ref|XP_002325408.1| predicted protein [Populus trichocarpa] gi|2...   308   5e-83
ref|XP_002525443.1| transcription factor, putative [Ricinus comm...   306   3e-82
emb|CBI29923.3| unnamed protein product [Vitis vinifera]              303   6e-80

>ref|XP_002319702.1| predicted protein [Populus trichocarpa] gi|222858078|gb|EEE95625.1|
            predicted protein [Populus trichocarpa]
          Length = 427

 Score =  305 bits (781), Expect(2) = 2e-84
 Identities = 166/235 (70%), Positives = 189/235 (80%), Gaps = 13/235 (5%)
 Frame = -3

Query: 1390 MYHHNHQNGKNSYPSSRF--PERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERF 1217
            MYHH+   GK+ + SSR   P  +H+FLQGG N  GD+GLVLSTDAKPRLKW P+LHERF
Sbjct: 1    MYHHHQHQGKSIHSSSRMAIPPERHLFLQGG-NGPGDSGLVLSTDAKPRLKWTPDLHERF 59

Query: 1216 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLNKNLHGQANTGNNKAGFMA 1037
            IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL+KNLHGQAN G++K G +A
Sbjct: 60   IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANIGSSKIGTVA 119

Query: 1036 AEAGDRMCDASGA------LTTGSQTNK-----SLQISESLEMQIEVQRRLNEQLEVQRH 890
               GDRM +A+        L+ GSQ NK     SL  SE+L+MQIEVQRRL+EQLEVQRH
Sbjct: 120  V-VGDRMPEANATHININNLSIGSQPNKILKSRSLHFSEALQMQIEVQRRLHEQLEVQRH 178

Query: 889  LQLRIEAQGKYLQSVLEKTQETLGKQKLGVCVGLEDAKVHISQLVFKLSNECLNS 725
            LQLRIEAQGKYLQ+VLEK QETLG+Q LG  VGLE AKV +S+LV K+S +CLNS
Sbjct: 179  LQLRIEAQGKYLQAVLEKAQETLGRQNLGT-VGLEAAKVQLSELVSKVSTQCLNS 232



 Score = 36.2 bits (82), Expect(2) = 2e-84
 Identities = 25/76 (32%), Positives = 40/76 (52%)
 Frame = -2

Query: 707 DGQTSSCEGSQKDQEIPFIRLTPFHHHTDNINDKETMGSREELQCETNEPQWCRNRNENN 528
           D   +SCEGSQK+QEI  I +     +++ + + + +     LQ    E +W     +N 
Sbjct: 259 DSCLTSCEGSQKEQEIHNIGMGLRPCNSNALLEPKEIAEEHALQ--QTELKWGEYLRDNK 316

Query: 527 LFPSCSIGKDTERMMF 480
           +F + SIG +TER  F
Sbjct: 317 MFLT-SIGHETERRTF 331


>ref|XP_002282324.1| PREDICTED: uncharacterized protein LOC100248614 isoform 1 [Vitis
            vinifera]
          Length = 418

 Score =  303 bits (777), Expect(2) = 1e-83
 Identities = 163/228 (71%), Positives = 189/228 (82%), Gaps = 6/228 (2%)
 Frame = -3

Query: 1390 MYHHNHQNGKNSYPSSRFP--ERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERF 1217
            MYHH+H  GKN +PSSR P    +++FLQGG N  GD+GLVLSTDAKPRLKW P+LHERF
Sbjct: 1    MYHHHHHQGKNIHPSSRTPITPERNLFLQGG-NGPGDSGLVLSTDAKPRLKWTPDLHERF 59

Query: 1216 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLNKNLHGQANTGNNKAGFMA 1037
            IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL+KNLHGQAN+  +K     
Sbjct: 60   IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSATSK----- 114

Query: 1036 AEAGDRMCDASGALTT----GSQTNKSLQISESLEMQIEVQRRLNEQLEVQRHLQLRIEA 869
               G+RM +A+GAL +    G+QTNKSL +SE+L+M IE QRRL+EQLEVQRHLQLRIEA
Sbjct: 115  TVVGERMPEANGALMSSPNIGNQTNKSLHLSETLQM-IEAQRRLHEQLEVQRHLQLRIEA 173

Query: 868  QGKYLQSVLEKTQETLGKQKLGVCVGLEDAKVHISQLVFKLSNECLNS 725
            QGKYLQ+VLEK QETLG+Q LG  VGLE AKV +S+LV K+S +CL+S
Sbjct: 174  QGKYLQAVLEKAQETLGRQNLG-AVGLEAAKVQLSELVSKVSTQCLHS 220



 Score = 35.0 bits (79), Expect(2) = 1e-83
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = -2

Query: 707 DGQTSSCEGSQKDQEIP--FIRLTPFHHHTDNINDKETMGSREELQCETNEPQWCRNRNE 534
           D   +SCEGSQ++QEI    + L P+ + +  +  K+T    E    +    +WC +  E
Sbjct: 246 DSCLTSCEGSQREQEIHNCGMGLRPYTNGSTPLEAKDT---AEPPGLQHTVLKWCEDTKE 302

Query: 533 NNLFPSCSIGKDTER 489
           N  F S S+ +D ER
Sbjct: 303 NRQFIS-SMQRDAER 316


>ref|XP_002325408.1| predicted protein [Populus trichocarpa] gi|222862283|gb|EEE99789.1|
            predicted protein [Populus trichocarpa]
          Length = 421

 Score =  308 bits (789), Expect(2) = 5e-83
 Identities = 165/228 (72%), Positives = 189/228 (82%), Gaps = 6/228 (2%)
 Frame = -3

Query: 1390 MYHHNHQNGKNSYPSSR--FPERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERF 1217
            MY H+   GKN + SSR   P  +H+FLQ G N  GD+GLVLSTDAKPRLKW  +LHERF
Sbjct: 1    MYQHHQHQGKNIHSSSRNSIPPERHLFLQVG-NGPGDSGLVLSTDAKPRLKWTTDLHERF 59

Query: 1216 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLNKNLHGQANTGNNKAGFMA 1037
            IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL+KNLHGQAN+G+NK+G +A
Sbjct: 60   IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSGSNKSGTVA 119

Query: 1036 AEAGDRMCDASGA----LTTGSQTNKSLQISESLEMQIEVQRRLNEQLEVQRHLQLRIEA 869
               GDRM + +      L+ GSQTNKSL  SE+L++QIEVQRRL+EQLEVQRHLQLRIEA
Sbjct: 120  V-VGDRMPEVNATHINNLSIGSQTNKSLHFSEALQVQIEVQRRLHEQLEVQRHLQLRIEA 178

Query: 868  QGKYLQSVLEKTQETLGKQKLGVCVGLEDAKVHISQLVFKLSNECLNS 725
            QGKYLQSVLEK QETLG+Q LG  VGLE AKV +S+LV K+S++CLNS
Sbjct: 179  QGKYLQSVLEKAQETLGRQNLGT-VGLEAAKVQLSELVSKVSSKCLNS 225



 Score = 28.1 bits (61), Expect(2) = 5e-83
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -2

Query: 707 DGQTSSCEGSQKDQEIPFIRLTPFHHHTDNINDKETMGSREELQCETNEPQW-CRNRNEN 531
           D   +S EGSQK+QEI    +    ++ + + + + +     LQ    E +W   ++ +N
Sbjct: 252 DSCLTSIEGSQKEQEIHNTGMGLRPYNGNALLEPKVIAGEHALQ--QTELKWPGEDQRDN 309

Query: 530 NLFPSCSIGKDTERMMF 480
            +F S S+  DTER  F
Sbjct: 310 KMFLS-SMRNDTERRTF 325


>ref|XP_002525443.1| transcription factor, putative [Ricinus communis]
            gi|223535256|gb|EEF36933.1| transcription factor,
            putative [Ricinus communis]
          Length = 419

 Score =  306 bits (783), Expect(2) = 3e-82
 Identities = 162/228 (71%), Positives = 186/228 (81%), Gaps = 6/228 (2%)
 Frame = -3

Query: 1390 MYHHNHQNGKNSYPSSRF--PERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERF 1217
            MYHH+   GK+ + SSR   P  +H+FLQGG N  GD+GLVLSTDAKPRLKW  +LHE F
Sbjct: 1    MYHHHQHQGKSVHSSSRMSIPPERHLFLQGG-NGPGDSGLVLSTDAKPRLKWTSDLHEHF 59

Query: 1216 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLNKNLHGQANTGNNKAGFMA 1037
            IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL+KNLHGQAN+G+NK G   
Sbjct: 60   IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSGSNKIG-TG 118

Query: 1036 AEAGDRMCDAS----GALTTGSQTNKSLQISESLEMQIEVQRRLNEQLEVQRHLQLRIEA 869
            A  GDR+ + +      L+ G+QTNK L I E+L+MQIEVQRRL+EQLEVQRHLQLRIEA
Sbjct: 119  AVVGDRISETNVTHINNLSMGTQTNKGLHIGEALQMQIEVQRRLHEQLEVQRHLQLRIEA 178

Query: 868  QGKYLQSVLEKTQETLGKQKLGVCVGLEDAKVHISQLVFKLSNECLNS 725
            QGKYLQSVLEK QETLG+Q LG  +GLE AKV +S+LV K+S +CLNS
Sbjct: 179  QGKYLQSVLEKAQETLGRQNLG-SIGLEAAKVQLSELVSKVSTQCLNS 225



 Score = 27.7 bits (60), Expect(2) = 3e-82
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = -2

Query: 707 DGQTSSCEGSQKDQEI--PFIRLTPFHHHTDNINDKETMGSREELQCETNEPQWCRNRNE 534
           D   +SCEGSQK+QEI    + L P++ +       E+    E       E +W  +  +
Sbjct: 252 DSCLTSCEGSQKEQEIHNTGMGLRPYNGNA----LLESKDITEGHVLHQTELKWSEDLKD 307

Query: 533 NNLFPSCSIGKDTERMMF 480
           N +F S  +G +  R  F
Sbjct: 308 NKMFLS-PLGNNAARRNF 324


>emb|CBI29923.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score =  303 bits (777), Expect = 6e-80
 Identities = 163/228 (71%), Positives = 189/228 (82%), Gaps = 6/228 (2%)
 Frame = -3

Query: 1390 MYHHNHQNGKNSYPSSRFP--ERQHVFLQGGGNACGDTGLVLSTDAKPRLKWMPELHERF 1217
            MYHH+H  GKN +PSSR P    +++FLQGG N  GD+GLVLSTDAKPRLKW P+LHERF
Sbjct: 1    MYHHHHHQGKNIHPSSRTPITPERNLFLQGG-NGPGDSGLVLSTDAKPRLKWTPDLHERF 59

Query: 1216 IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLNKNLHGQANTGNNKAGFMA 1037
            IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL+KNLHGQAN+  +K     
Sbjct: 60   IEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQANSATSK----- 114

Query: 1036 AEAGDRMCDASGALTT----GSQTNKSLQISESLEMQIEVQRRLNEQLEVQRHLQLRIEA 869
               G+RM +A+GAL +    G+QTNKSL +SE+L+M IE QRRL+EQLEVQRHLQLRIEA
Sbjct: 115  TVVGERMPEANGALMSSPNIGNQTNKSLHLSETLQM-IEAQRRLHEQLEVQRHLQLRIEA 173

Query: 868  QGKYLQSVLEKTQETLGKQKLGVCVGLEDAKVHISQLVFKLSNECLNS 725
            QGKYLQ+VLEK QETLG+Q LG  VGLE AKV +S+LV K+S +CL+S
Sbjct: 174  QGKYLQAVLEKAQETLGRQNLG-AVGLEAAKVQLSELVSKVSTQCLHS 220


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