BLASTX nr result

ID: Coptis24_contig00010245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010245
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273308.1| PREDICTED: uncharacterized protein LOC100241...   232   4e-59
ref|XP_002523706.1| conserved hypothetical protein [Ricinus comm...   200   2e-49
ref|XP_004160068.1| PREDICTED: uncharacterized LOC101220454 [Cuc...   195   5e-48
ref|XP_002331451.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
ref|NP_001236731.1| uncharacterized protein LOC100500351 [Glycin...   167   2e-39

>ref|XP_002273308.1| PREDICTED: uncharacterized protein LOC100241419 [Vitis vinifera]
           gi|297734920|emb|CBI17154.3| unnamed protein product
           [Vitis vinifera]
          Length = 163

 Score =  232 bits (592), Expect = 4e-59
 Identities = 111/158 (70%), Positives = 132/158 (83%), Gaps = 7/158 (4%)
 Frame = +3

Query: 24  MEGDQPSTLMCGVVAMDKGSFCYRVCAVCERTLSEN-------SPCGFCNFKGSNPGSKR 182
           ME D+P TLMCG+VAMD  +FCYRVC+ CERTL +        S C  CNF  S P SKR
Sbjct: 1   MEDDKPWTLMCGLVAMDHTNFCYRVCSACERTLPDTATTNSTPSLCNVCNFNSSKPPSKR 60

Query: 183 LYKILLSIASDTKVFVVVCFDRAARVLFGCSADEFFDFAKLNPFSVVTAGKVLQGEMFQM 362
           L+++L+SIASDTKVFVV+CFDRAARVLFGCSADEFFDF KL+PF+ VTAGKVL+GEMF+M
Sbjct: 61  LFRVLVSIASDTKVFVVICFDRAARVLFGCSADEFFDFVKLHPFAAVTAGKVLEGEMFRM 120

Query: 363 TLSKPKNGNAEHLRVVSVVPLRTEYSPVIQTLKKIYGV 476
           TLSKPKNGNA+HLRVVSVVPLR+ + P I+TL+++YGV
Sbjct: 121 TLSKPKNGNAQHLRVVSVVPLRSGFQPAIETLRELYGV 158


>ref|XP_002523706.1| conserved hypothetical protein [Ricinus communis]
           gi|223537010|gb|EEF38646.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score =  200 bits (509), Expect = 2e-49
 Identities = 94/154 (61%), Positives = 123/154 (79%), Gaps = 2/154 (1%)
 Frame = +3

Query: 33  DQPSTLMCGVVAMDKGSFCYRVCAVCERTLSE--NSPCGFCNFKGSNPGSKRLYKILLSI 206
           D P+T+MC V+A+D  +  YR C++CERTL +  NS CGFCN   ++  SKR +++L+SI
Sbjct: 5   DNPTTIMCTVLAIDHSNLFYRACSLCERTLPDTPNSQCGFCN-NFNHSSSKRFFRLLVSI 63

Query: 207 ASDTKVFVVVCFDRAARVLFGCSADEFFDFAKLNPFSVVTAGKVLQGEMFQMTLSKPKNG 386
           A DTKV  V+CFDRAAR+LFGCSADEFFDFAK++PF+   AGK L+GEMF+M LSKPKNG
Sbjct: 64  AVDTKVLNVICFDRAARILFGCSADEFFDFAKIHPFASANAGKALEGEMFKMALSKPKNG 123

Query: 387 NAEHLRVVSVVPLRTEYSPVIQTLKKIYGVGPST 488
           NA+HLR VS++PLRT + P I+TLK++YGV  S+
Sbjct: 124 NAQHLRAVSILPLRTGFQPAIETLKELYGVRASS 157


>ref|XP_004160068.1| PREDICTED: uncharacterized LOC101220454 [Cucumis sativus]
          Length = 159

 Score =  195 bits (496), Expect = 5e-48
 Identities = 93/156 (59%), Positives = 120/156 (76%), Gaps = 5/156 (3%)
 Frame = +3

Query: 24  MEGDQPSTLMCGVVAMDKGSFCYRVCAVCERTLSEN--SPCGFCNFKGSNPGS---KRLY 188
           ME  +P T MC V+AMD  +FCYRVC++CERTL  N  S C FCNF   NPGS   KR++
Sbjct: 1   MENGKPITTMCAVMAMDYTNFCYRVCSICERTLPVNPSSLCKFCNFNAFNPGSSSSKRVF 60

Query: 189 KILLSIASDTKVFVVVCFDRAARVLFGCSADEFFDFAKLNPFSVVTAGKVLQGEMFQMTL 368
           ++L+SIA+D KV  V+CFDR ARVLFGCSADEFFDFAKL+PF+  T  ++L+GEM ++T+
Sbjct: 61  RLLMSIATDKKVQTVICFDRVARVLFGCSADEFFDFAKLHPFAAETVSEILEGEMLRITI 120

Query: 369 SKPKNGNAEHLRVVSVVPLRTEYSPVIQTLKKIYGV 476
           SKPKNGNA+H RVV +VPL + + P I  L+++YGV
Sbjct: 121 SKPKNGNAQHSRVVQIVPLSSCFQPAIIRLRELYGV 156


>ref|XP_002331451.1| predicted protein [Populus trichocarpa] gi|222873529|gb|EEF10660.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  189 bits (481), Expect = 3e-46
 Identities = 91/158 (57%), Positives = 124/158 (78%), Gaps = 3/158 (1%)
 Frame = +3

Query: 27  EGDQPSTLMCGVVAMD-KGSFCYRVCAVCERTLSE--NSPCGFCNFKGSNPGSKRLYKIL 197
           E ++ +T+MC V+ MD   S  YR C++CERTL +  N+ C FC+   ++  SKRL+++L
Sbjct: 3   EYEKATTVMCTVIGMDYANSLSYRACSLCERTLPDTLNALCKFCHNNTASSSSKRLFRVL 62

Query: 198 LSIASDTKVFVVVCFDRAARVLFGCSADEFFDFAKLNPFSVVTAGKVLQGEMFQMTLSKP 377
           +SIA+DTKV  V+CFDRAARVLFGCSAD+FF F+KL+PF+   A K+L+GEM +MTLSKP
Sbjct: 63  VSIATDTKVLNVMCFDRAARVLFGCSADDFFHFSKLHPFAASNAAKILEGEMCRMTLSKP 122

Query: 378 KNGNAEHLRVVSVVPLRTEYSPVIQTLKKIYGVGPSTS 491
           KNGNA+HLR VS+VPLR+ + P I++LK+ YGV P+TS
Sbjct: 123 KNGNAQHLRAVSIVPLRSGFKPAIESLKEFYGVKPATS 160


>ref|NP_001236731.1| uncharacterized protein LOC100500351 [Glycine max]
           gi|255630101|gb|ACU15404.1| unknown [Glycine max]
          Length = 161

 Score =  167 bits (422), Expect = 2e-39
 Identities = 84/149 (56%), Positives = 112/149 (75%), Gaps = 2/149 (1%)
 Frame = +3

Query: 30  GDQPST--LMCGVVAMDKGSFCYRVCAVCERTLSENSPCGFCNFKGSNPGSKRLYKILLS 203
           G++ ST  + C V+++D  +  YRVCAVCERT+S+  P   C+   SNP SKRL++IL+S
Sbjct: 11  GEEGSTGRVTCSVLSIDHTNMFYRVCAVCERTISD--PTFVCH--PSNPPSKRLFRILMS 66

Query: 204 IASDTKVFVVVCFDRAARVLFGCSADEFFDFAKLNPFSVVTAGKVLQGEMFQMTLSKPKN 383
           +A+DT+V  VVCFDR AR+LFGCSADEFF FAKL+PFS VT  ++L+GE+F +TLS+P N
Sbjct: 67  VATDTQVLTVVCFDRVARLLFGCSADEFFHFAKLHPFSGVTVNEILEGEIFTITLSRPVN 126

Query: 384 GNAEHLRVVSVVPLRTEYSPVIQTLKKIY 470
            NA+HLRV S VPL + + P I  LK+ Y
Sbjct: 127 ANAQHLRVASAVPLSSAFRPAIHLLKQCY 155


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