BLASTX nr result

ID: Coptis24_contig00010240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010240
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319133.1| predicted protein [Populus trichocarpa] gi|2...   247   2e-63
emb|CBI28673.3| unnamed protein product [Vitis vinifera]              239   4e-61
ref|XP_002265708.1| PREDICTED: uncharacterized protein LOC100240...   239   4e-61
ref|XP_002319134.1| predicted protein [Populus trichocarpa] gi|2...   239   6e-61
ref|XP_002525476.1| conserved hypothetical protein [Ricinus comm...   237   2e-60

>ref|XP_002319133.1| predicted protein [Populus trichocarpa] gi|222857509|gb|EEE95056.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  247 bits (630), Expect = 2e-63
 Identities = 133/169 (78%), Positives = 147/169 (86%), Gaps = 1/169 (0%)
 Frame = +3

Query: 243 DSNLKVEVGRSRIPNLIPA-VKLGLSDQAFLLLAFIGCTTSIAFTSFVVVAVPTLFAMAR 419
           + NL V+VG   +PN I +  KL LSDQAF LL+FI CTTSIAFTS VV AVPTL+AM +
Sbjct: 33  ERNLNVQVGNPIVPNYIQSWTKLSLSDQAFFLLSFIACTTSIAFTSLVVAAVPTLYAMGK 92

Query: 420 AATSLSKLADTAREELPSTMAAIRLSGMEISDLTLELSELSQEITDGVNKSTQAVQAAEA 599
           AATS SKLADTAREELPSTMAAIRLSGMEISDLTLELS+LSQEITDGVNKS QAVQAAEA
Sbjct: 93  AATSFSKLADTAREELPSTMAAIRLSGMEISDLTLELSDLSQEITDGVNKSAQAVQAAEA 152

Query: 600 GIRQIGALARQQTMSMIEERANLPVISLQPAVAGAAKKTTQAVGRDKKT 746
           GIRQIGALA Q TMSMI+ERA+LP+ISLQP VAGAAKKT++AVG+  KT
Sbjct: 153 GIRQIGALAHQHTMSMIQERASLPIISLQPVVAGAAKKTSRAVGQATKT 201


>emb|CBI28673.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  239 bits (611), Expect = 4e-61
 Identities = 128/165 (77%), Positives = 144/165 (87%), Gaps = 1/165 (0%)
 Frame = +3

Query: 255 KVEVGRSRIP-NLIPAVKLGLSDQAFLLLAFIGCTTSIAFTSFVVVAVPTLFAMARAATS 431
           KVEV    +P + +P  KL L+D+AF LLAFI CTTS+AFTS V+ AVPTLFAM RAATS
Sbjct: 65  KVEVQSPLVPASAVPPAKLSLNDRAFFLLAFIACTTSVAFTSLVIAAVPTLFAMGRAATS 124

Query: 432 LSKLADTAREELPSTMAAIRLSGMEISDLTLELSELSQEITDGVNKSTQAVQAAEAGIRQ 611
           L+KLADTAREELPSTMAAIRLSGMEISDLTLELS+LSQEI DGV+KSTQAVQAAEAGIRQ
Sbjct: 125 LAKLADTAREELPSTMAAIRLSGMEISDLTLELSDLSQEIADGVSKSTQAVQAAEAGIRQ 184

Query: 612 IGALARQQTMSMIEERANLPVISLQPAVAGAAKKTTQAVGRDKKT 746
           IG LARQQT SMI+ERA+LP+ISLQP V GAAKKT++AVG+  KT
Sbjct: 185 IGTLARQQTASMIQERASLPIISLQPVVTGAAKKTSRAVGQATKT 229


>ref|XP_002265708.1| PREDICTED: uncharacterized protein LOC100240963 [Vitis vinifera]
          Length = 271

 Score =  239 bits (611), Expect = 4e-61
 Identities = 128/165 (77%), Positives = 144/165 (87%), Gaps = 1/165 (0%)
 Frame = +3

Query: 255 KVEVGRSRIP-NLIPAVKLGLSDQAFLLLAFIGCTTSIAFTSFVVVAVPTLFAMARAATS 431
           KVEV    +P + +P  KL L+D+AF LLAFI CTTS+AFTS V+ AVPTLFAM RAATS
Sbjct: 82  KVEVQSPLVPASAVPPAKLSLNDRAFFLLAFIACTTSVAFTSLVIAAVPTLFAMGRAATS 141

Query: 432 LSKLADTAREELPSTMAAIRLSGMEISDLTLELSELSQEITDGVNKSTQAVQAAEAGIRQ 611
           L+KLADTAREELPSTMAAIRLSGMEISDLTLELS+LSQEI DGV+KSTQAVQAAEAGIRQ
Sbjct: 142 LAKLADTAREELPSTMAAIRLSGMEISDLTLELSDLSQEIADGVSKSTQAVQAAEAGIRQ 201

Query: 612 IGALARQQTMSMIEERANLPVISLQPAVAGAAKKTTQAVGRDKKT 746
           IG LARQQT SMI+ERA+LP+ISLQP V GAAKKT++AVG+  KT
Sbjct: 202 IGTLARQQTASMIQERASLPIISLQPVVTGAAKKTSRAVGQATKT 246


>ref|XP_002319134.1| predicted protein [Populus trichocarpa] gi|222857510|gb|EEE95057.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  239 bits (609), Expect = 6e-61
 Identities = 133/179 (74%), Positives = 147/179 (82%), Gaps = 11/179 (6%)
 Frame = +3

Query: 243 DSNLKVEVGRSRIPNLIPA-VKLGLSDQAFLLLAFIGCTTSIAFTSFVVVAVPTLF---- 407
           + NL V+VG   +PN I +  KL LSDQAF LL+FI CTTSIAFTS VV AVPTL+    
Sbjct: 90  ERNLNVQVGNPIVPNYIQSWTKLSLSDQAFFLLSFIACTTSIAFTSLVVAAVPTLYVSYL 149

Query: 408 ------AMARAATSLSKLADTAREELPSTMAAIRLSGMEISDLTLELSELSQEITDGVNK 569
                 AM +AATS SKLADTAREELPSTMAAIRLSGMEISDLTLELS+LSQEITDGVNK
Sbjct: 150 TLHLSAAMGKAATSFSKLADTAREELPSTMAAIRLSGMEISDLTLELSDLSQEITDGVNK 209

Query: 570 STQAVQAAEAGIRQIGALARQQTMSMIEERANLPVISLQPAVAGAAKKTTQAVGRDKKT 746
           S QAVQAAEAGIRQIGALA Q TMSMI+ERA+LP+ISLQP VAGAAKKT++AVG+  KT
Sbjct: 210 SAQAVQAAEAGIRQIGALAHQHTMSMIQERASLPIISLQPVVAGAAKKTSRAVGQATKT 268


>ref|XP_002525476.1| conserved hypothetical protein [Ricinus communis]
           gi|223535289|gb|EEF36966.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 283

 Score =  237 bits (605), Expect = 2e-60
 Identities = 126/170 (74%), Positives = 145/170 (85%), Gaps = 1/170 (0%)
 Frame = +3

Query: 240 FDSNLKVEVGRSRIPNLI-PAVKLGLSDQAFLLLAFIGCTTSIAFTSFVVVAVPTLFAMA 416
           F+ +L +++G   +P+ I P+ KL L+DQAF LL+FI CTTSIAFTS V+ A+PTL AM 
Sbjct: 89  FERSLNMQMGNPVVPSFIQPSNKLSLNDQAFFLLSFIACTTSIAFTSLVIAAIPTLHAMG 148

Query: 417 RAATSLSKLADTAREELPSTMAAIRLSGMEISDLTLELSELSQEITDGVNKSTQAVQAAE 596
           RAATSLSKLADTAREELPSTMAAIRLSGMEISDLTLELS+LS EI DGVNKS QAVQAAE
Sbjct: 149 RAATSLSKLADTAREELPSTMAAIRLSGMEISDLTLELSDLSHEIADGVNKSAQAVQAAE 208

Query: 597 AGIRQIGALARQQTMSMIEERANLPVISLQPAVAGAAKKTTQAVGRDKKT 746
           AGIRQIG LA Q TMSMI+ERA+LP+ISLQP VAGAAKKT++AVG   K+
Sbjct: 209 AGIRQIGTLAHQHTMSMIQERASLPIISLQPVVAGAAKKTSRAVGEATKS 258


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