BLASTX nr result

ID: Coptis24_contig00010239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010239
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258...   127   4e-27
ref|XP_002313486.1| predicted protein [Populus trichocarpa] gi|2...   112   9e-23
ref|XP_002298275.1| predicted protein [Populus trichocarpa] gi|2...   112   1e-22
ref|XP_002523872.1| conserved hypothetical protein [Ricinus comm...   108   1e-21
emb|CAN79941.1| hypothetical protein VITISV_027780 [Vitis vinifera]   106   9e-21

>ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258714 [Vitis vinifera]
          Length = 239

 Score =  127 bits (319), Expect = 4e-27
 Identities = 74/200 (37%), Positives = 104/200 (52%)
 Frame = +1

Query: 316 PAYTTQRAALFRRVLIIFVSICIIFGALSLILWLVLRPHIPEFQINSATVSPFNVSTSSS 495
           P Y++ RA   RR L   ++  II G +  I+WLVLRP +P F + SA++S FNVS  +S
Sbjct: 47  PPYSSPRATFLRRFLAAMIAFFIIVGTIIFIVWLVLRPRLPYFSVASASLSSFNVS--AS 104

Query: 496 QVSGNWDIEFIAKNPNKKLNVYYDTIQGGVFYGRELLSETTLAPFYQGTLNETKFGAKFA 675
           Q+SG W+I F  +NPNKK+++ YD I+  + Y    LS+TT+APFYQGT NET   A FA
Sbjct: 105 QLSGEWNISFDVRNPNKKISISYDRIESSIAYKSATLSQTTIAPFYQGTKNETTVTATFA 164

Query: 676 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDAYVGDFFSKKMDRERKSGTVNFNV 855
                                            +  AYV       ++ ER  G+V+F V
Sbjct: 165 ---------------------------------AIGAYVDVL---AINAERTRGSVSFTV 188

Query: 856 RLKGLVKFRSSTWRTRVHLL 915
           ++   V F+S  W+ R   L
Sbjct: 189 KVFARVSFKSGVWKARSRFL 208


>ref|XP_002313486.1| predicted protein [Populus trichocarpa] gi|222849894|gb|EEE87441.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  112 bits (281), Expect = 9e-23
 Identities = 63/198 (31%), Positives = 99/198 (50%)
 Frame = +1

Query: 322 YTTQRAALFRRVLIIFVSICIIFGALSLILWLVLRPHIPEFQINSATVSPFNVSTSSSQV 501
           Y  QRA L RR++   + + +IF  +  I+WLV+RPH+PEF++ S +VS FN S+SSS V
Sbjct: 52  YPNQRATLLRRLIAALIIVTVIFFTILFIVWLVIRPHLPEFRVTSLSVSSFNASSSSSSV 111

Query: 502 SGNWDIEFIAKNPNKKLNVYYDTIQGGVFYGRELLSETTLAPFYQGTLNETKFGAKFAXX 681
           SGNW+  F   NPN KL + Y  IQ  ++Y  E LS+T + PF Q   N T   A++   
Sbjct: 112 SGNWNARFQVYNPN-KLKISYGDIQSSIYYKSEFLSQTRIPPFKQAKKNVTDINAEYG-- 168

Query: 682 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDAYVGDFFSKKMDRERKSGTVNFNVRL 861
                                          +  +Y+      +++ ++  G+V+FN+++
Sbjct: 169 -------------------------------AMGSYIAGRAVNQINGDKGRGSVSFNLKI 197

Query: 862 KGLVKFRSSTWRTRVHLL 915
                +R   +R R  LL
Sbjct: 198 VADAVYRVGGFRARRRLL 215


>ref|XP_002298275.1| predicted protein [Populus trichocarpa] gi|222845533|gb|EEE83080.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score =  112 bits (280), Expect = 1e-22
 Identities = 52/117 (44%), Positives = 72/117 (61%)
 Frame = +1

Query: 322 YTTQRAALFRRVLIIFVSICIIFGALSLILWLVLRPHIPEFQINSATVSPFNVSTSSSQV 501
           Y  QRA   RR++I  +    IF  +  I WLV+RPH PEF++ S ++S FNVS+SSS V
Sbjct: 53  YPNQRAIFLRRLIIALIIFTGIFFTILFICWLVIRPHFPEFRVTSLSISNFNVSSSSSSV 112

Query: 502 SGNWDIEFIAKNPNKKLNVYYDTIQGGVFYGRELLSETTLAPFYQGTLNETKFGAKF 672
           +G W+  F   NPNKK+ + Y+ IQ  +FY  E LS+T + PF QG  N T    ++
Sbjct: 113 TGTWNARFQVSNPNKKMKISYNEIQTSIFYKSEFLSQTRIPPFRQGKRNVTDIDVEY 169


>ref|XP_002523872.1| conserved hypothetical protein [Ricinus communis]
           gi|223536960|gb|EEF38598.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 239

 Score =  108 bits (271), Expect = 1e-21
 Identities = 69/202 (34%), Positives = 95/202 (47%)
 Frame = +1

Query: 310 PHPAYTTQRAALFRRVLIIFVSICIIFGALSLILWLVLRPHIPEFQINSATVSPFNVSTS 489
           P P Y   R  L RR++   +   ++F  + LI WLV+RPH P+F I S ++S FN+S S
Sbjct: 44  PTPLY---RTTLLRRIIAAIIVATVLFFTIFLICWLVIRPHRPQFHITSFSISNFNISAS 100

Query: 490 SSQVSGNWDIEFIAKNPNKKLNVYYDTIQGGVFYGRELLSETTLAPFYQGTLNETKFGAK 669
           S +++ NW+  F   NPNKKL + YD I   +    ELLS+T + P YQ T N T   A 
Sbjct: 101 SQRLTANWNARFQVYNPNKKLKISYDNIVCSLLLKSELLSQTRIPPLYQDTKNLTSLDAS 160

Query: 670 FAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDAYVGDFFSKKMDRERKSGTVNF 849
           F+                                 + D YV D   K ++  R   T+ F
Sbjct: 161 FS---------------------------------ALDTYVDDRVLKDINAARP--TLAF 185

Query: 850 NVRLKGLVKFRSSTWRTRVHLL 915
           NVRL   V F+   +R R  LL
Sbjct: 186 NVRLMADVGFKVGGFRARHRLL 207


>emb|CAN79941.1| hypothetical protein VITISV_027780 [Vitis vinifera]
          Length = 145

 Score =  106 bits (264), Expect = 9e-21
 Identities = 51/102 (50%), Positives = 70/102 (68%)
 Frame = +1

Query: 370 VSICIIFGALSLILWLVLRPHIPEFQINSATVSPFNVSTSSSQVSGNWDIEFIAKNPNKK 549
           ++  II G +  I+WLVLRP +P F + SA++S FNVS  +SQ+SG W+I F  +NPNKK
Sbjct: 2   IAFFIIVGTIIFIVWLVLRPRLPYFSVASASLSSFNVS--ASQLSGEWNISFDVRNPNKK 59

Query: 550 LNVYYDTIQGGVFYGRELLSETTLAPFYQGTLNETKFGAKFA 675
           +++ YD I+  + Y    LS+TT+APFYQGT NE    A FA
Sbjct: 60  ISISYDRIESSIAYKSATLSQTTIAPFYQGTKNEXTVRATFA 101


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