BLASTX nr result

ID: Coptis24_contig00010234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010234
         (2041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329273.1| predicted protein [Populus trichocarpa] gi|2...   330   9e-88
ref|XP_002305950.1| predicted protein [Populus trichocarpa] gi|2...   322   2e-85
gb|ABK95828.1| unknown [Populus trichocarpa]                          322   2e-85
ref|XP_002283268.2| PREDICTED: uncharacterized protein LOC100253...   318   3e-84
ref|XP_002882236.1| hypothetical protein ARALYDRAFT_340395 [Arab...   229   2e-57

>ref|XP_002329273.1| predicted protein [Populus trichocarpa] gi|222870727|gb|EEF07858.1|
            predicted protein [Populus trichocarpa]
          Length = 434

 Score =  330 bits (846), Expect = 9e-88
 Identities = 206/445 (46%), Positives = 271/445 (60%), Gaps = 16/445 (3%)
 Frame = -2

Query: 1974 VIMQATKLSLPCNPSSSSQITSLLFEPISNTLATMHTDSSIHLXXXXXXXXXXXXXXXXX 1795
            V+++++KLSLP    S     S+LFEP S +LA MHTDSS+ L                 
Sbjct: 2    VLVESSKLSLP---PSLPPTKSILFEPNSLSLALMHTDSSVSLFPCLSFPSPPLPPKPQT 58

Query: 1794 XXXFCTSSTFFHLQSSPNSPSHTLFLVAGPKKADSRIYLRFWILEKSKNLFLKARLECNQ 1615
                 +SS+ F L      P   LFLVA P K  S+I LRF++L+K  N+F K ++ CNQ
Sbjct: 59   LVPSPSSSSSFLLIHQDPIPK-VLFLVASPYKGGSQILLRFYLLQKD-NIFCKPQVVCNQ 116

Query: 1614 RGFFIDDKKYGVLIDLCHGXXXXXXXXXXXXVLHSVSERKIWVFSAKVXXXXESCVCVKL 1435
            +G   D K  GVL+D+ HG            VLHSVS +K+WVF+ K+    +  + VKL
Sbjct: 117  KGIAFDSK-LGVLLDINHGVSIKIVGSVNFFVLHSVSSKKVWVFAVKLIDDGDGEM-VKL 174

Query: 1434 IKCGVIDCNVGISEISVSFGFLVLGEVNGVRVFSVRQLVKGRVKRKEKRIGSGGSS---- 1267
            ++C VI+C+V +  ISVS G LVLGE NGVRVF++RQLVKGRVK   K I S G S    
Sbjct: 175  MRCAVIECSVPVWSISVSSGVLVLGEDNGVRVFNLRQLVKGRVKNV-KDISSNGKSDGKG 233

Query: 1266 ----YACLGNGNCRGNEPAEMSSDGCTG----KTEMNNASAKLRARTLKQDS----AVFV 1123
                   +G+    G+     S +GC G    KT+    S KLR+   +QDS    A FV
Sbjct: 234  FKLPNGVVGDDYFHGSS----SGNGCNGVLDMKTDKQYVSVKLRSVRCRQDSGEGGACFV 289

Query: 1122 AFDNLEAPTEKFSTIKAVSIHSLSQKKFIILDSVGDLHLLCLFSMLSGSEVTGHLRSLNH 943
            AF   E    K  T KAVSI +LS KKF+ILDS+GDLH+LCL + + GS    H+R L H
Sbjct: 290  AFKREEVEVLKPKTSKAVSIQALSHKKFVILDSMGDLHILCLSAPVIGSNFMAHMRRLPH 349

Query: 942  LIKVQMLAVLPDVSTSTQTFWISDGFYSLHAISLSDMEASLNENDASEMEEKRVQISAIE 763
             +KVQ LAVLPD+S   QTFW+SDG +S+H I+LSDM A++N N+  E +EK +QI+ I+
Sbjct: 350  SMKVQKLAVLPDISLKMQTFWVSDGLHSVHTITLSDMGAAVNSNNEDETQEKLIQITVIQ 409

Query: 762  AVFASEKIQNLIPLSANAVLILGQG 688
            A+F++EKIQ+LIPL AN +LILGQG
Sbjct: 410  AIFSAEKIQDLIPLGANGILILGQG 434


>ref|XP_002305950.1| predicted protein [Populus trichocarpa] gi|222848914|gb|EEE86461.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  322 bits (826), Expect = 2e-85
 Identities = 195/446 (43%), Positives = 269/446 (60%), Gaps = 10/446 (2%)
 Frame = -2

Query: 1974 VIMQATKLSLPCNPSSSSQITSLLFEPISNTLATMHTDSSIHLXXXXXXXXXXXXXXXXX 1795
            V++Q++KLSLP + S++    SLLFEP S +LA MHTDSS+ L                 
Sbjct: 2    VLVQSSKLSLPPSVSATK---SLLFEPNSLSLALMHTDSSLSLFPSLPFPSLPSLPPKPQ 58

Query: 1794 XXXFCTSSTFFHLQSSPNSPSHTLFLVAGPKKADSRIYLRFWILEKSKNLFLKARLECNQ 1615
                  SS+   L    +     LFLVAGP K  S+I LRF +L+   + F K ++ CNQ
Sbjct: 59   TLVPSPSSSSSFLLIHQDPIPKVLFLVAGPYKGGSQILLRFHVLQND-SFFYKPQVVCNQ 117

Query: 1614 RGFFIDDKKYGVLIDLCHGXXXXXXXXXXXXVLHSVSERKIWVFSAKVXXXXESCVCVKL 1435
            +G   D K  GVL+D+ HG            VLHSVS +K+WVF+ K+    +  + +KL
Sbjct: 118  KGLAFDSK-LGVLLDINHGVSIKIVGSINFFVLHSVSSKKVWVFAVKIIDDGDGEM-LKL 175

Query: 1434 IKCGVIDCNVGISEISVSFGFLVLGEVNGVRVFSVRQLVKGRVKRKEKRIGSGGSSYACL 1255
            ++C VI+C+V +  ISVS G L+LGE NGVRVF++RQLVK +VK+ +    +G      L
Sbjct: 176  MRCAVIECSVPVWSISVSSGVLILGEDNGVRVFNLRQLVKWKVKKVKGFDSNGKLDRKGL 235

Query: 1254 GNGNCRGNEPAEMSSDG------CTGKTEMNNASAKLRARTLKQDS----AVFVAFDNLE 1105
             + N  G +    SS G        GKT+ +  S K R+    QDS    A FVAF    
Sbjct: 236  KSSNGDGEDNGVSSSSGNACNGALDGKTDKHCVSVKQRSVRCSQDSGEGGACFVAFKREV 295

Query: 1104 APTEKFSTIKAVSIHSLSQKKFIILDSVGDLHLLCLFSMLSGSEVTGHLRSLNHLIKVQM 925
                K +T+KAVSI +L  KKF+ILDS GDLH+LCL + + G  V  H+R L H +KVQ 
Sbjct: 296  TEGMKPTTLKAVSIQALPPKKFVILDSTGDLHILCLSAPVVGPNVMAHMRQLPHSMKVQK 355

Query: 924  LAVLPDVSTSTQTFWISDGFYSLHAISLSDMEASLNENDASEMEEKRVQISAIEAVFASE 745
            LAV PD S+  QTFW+SDG +S+H I+LS+M+A++N ND    +EK ++I+ I+A+ ++E
Sbjct: 356  LAVFPDFSSKMQTFWVSDGLHSVHTITLSNMDAAVNTNDGDVTQEKLIRITVIQAILSAE 415

Query: 744  KIQNLIPLSANAVLILGQGNIFAYAI 667
            KIQ+LIPL AN +LILGQGNI++Y I
Sbjct: 416  KIQDLIPLGANGILILGQGNIYSYTI 441


>gb|ABK95828.1| unknown [Populus trichocarpa]
          Length = 442

 Score =  322 bits (825), Expect = 2e-85
 Identities = 194/446 (43%), Positives = 270/446 (60%), Gaps = 10/446 (2%)
 Frame = -2

Query: 1974 VIMQATKLSLPCNPSSSSQITSLLFEPISNTLATMHTDSSIHLXXXXXXXXXXXXXXXXX 1795
            V++Q++KLSLP + S++    SLLFEP S +LA MHTDSS+ L                 
Sbjct: 2    VLVQSSKLSLPPSVSATK---SLLFEPNSLSLALMHTDSSLSLFPSLPFPSLPSLPPKPQ 58

Query: 1794 XXXFCTSSTFFHLQSSPNSPSHTLFLVAGPKKADSRIYLRFWILEKSKNLFLKARLECNQ 1615
                  SS+   L    +     LFLVAGP K  S+I LRF +L+   + F K ++ CNQ
Sbjct: 59   TLVPSPSSSSSFLLIHQDPIPKVLFLVAGPYKGGSQILLRFHVLQND-SFFYKPQVVCNQ 117

Query: 1614 RGFFIDDKKYGVLIDLCHGXXXXXXXXXXXXVLHSVSERKIWVFSAKVXXXXESCVCVKL 1435
            +G   D K  GVL+D+ HG            VLHSVS +K+WVF+ K+    +  + +KL
Sbjct: 118  KGLAFDSK-LGVLLDINHGVSIKIVGSINFFVLHSVSSKKVWVFAVKIIDDGDGEM-LKL 175

Query: 1434 IKCGVIDCNVGISEISVSFGFLVLGEVNGVRVFSVRQLVKGRVKRKEKRIGSGGSSYACL 1255
            ++C VI+C+V +  ISVS G L+LGE NGVRVF++RQLVK +VK+ +    +G      L
Sbjct: 176  MRCAVIECSVPVWSISVSSGVLILGEDNGVRVFNLRQLVKWKVKKVKGFDSNGKLDRKGL 235

Query: 1254 GNGNCRGNEPAEMSSDG------CTGKTEMNNASAKLRARTLKQDS----AVFVAFDNLE 1105
             + N  G +    SS G        GKT+ +  S K R+    QDS    A FVAF    
Sbjct: 236  KSSNGDGEDNGVSSSSGNACNGALDGKTDKHCVSVKQRSVRCSQDSGEGGACFVAFKREA 295

Query: 1104 APTEKFSTIKAVSIHSLSQKKFIILDSVGDLHLLCLFSMLSGSEVTGHLRSLNHLIKVQM 925
                K +T+KAVSI +L  KKF+ILDS+GDLH+LCL + + G  V  H+R L H +KVQ 
Sbjct: 296  TEGMKPTTLKAVSIQALPPKKFVILDSIGDLHILCLSAPVVGPNVMAHMRQLPHSMKVQK 355

Query: 924  LAVLPDVSTSTQTFWISDGFYSLHAISLSDMEASLNENDASEMEEKRVQISAIEAVFASE 745
            LAV PD S+  QTFW+SDG +S+H I+LS+M+A++N N+    +EK ++I+ I+A+ ++E
Sbjct: 356  LAVFPDFSSKMQTFWVSDGLHSVHTITLSNMDAAVNTNNGDVTQEKLIRITVIQAILSAE 415

Query: 744  KIQNLIPLSANAVLILGQGNIFAYAI 667
            KIQ+LIPL AN +LILGQGNI++Y I
Sbjct: 416  KIQDLIPLGANGILILGQGNIYSYTI 441


>ref|XP_002283268.2| PREDICTED: uncharacterized protein LOC100253163 [Vitis vinifera]
          Length = 466

 Score =  318 bits (816), Expect = 3e-84
 Identities = 205/456 (44%), Positives = 277/456 (60%), Gaps = 21/456 (4%)
 Frame = -2

Query: 1968 MQATKLSLPCNPSSSS--QITSLLFEPISNTLATMHTDSSIHLXXXXXXXXXXXXXXXXX 1795
            +QA KLSLP  PS SS   ITSLLFEP SN+LA MH+DSS  L                 
Sbjct: 15   VQACKLSLP-RPSFSSLPPITSLLFEPHSNSLALMHSDSSFSLYPSLSPFSPPSPQSQAP 73

Query: 1794 XXXFC----TSSTFFHLQSS-PNSPSHT---LFLVAGPKKADSRIYLRFWILEKSKNLFL 1639
                     + +TF  LQ+  PNS +H    LF+VA P +A + + LRF++L+K++ LF 
Sbjct: 74   TLTLVPPPSSFATFLLLQNPRPNSGAHNPRVLFVVAAPHRAGAAVILRFYVLQKTQ-LFT 132

Query: 1638 KARLECNQRGFFIDDKKYGVLIDLCHGXXXXXXXXXXXXVLHSVSERKIWVFSAKVXXXX 1459
            KA + C QR    D K  GVL +  HG             ++SVS  KIWVFS K+    
Sbjct: 133  KAEVLCTQRDLQFDPK-LGVLFNANHGVSVKLGGSINIFAMYSVSNSKIWVFSVKMAGDD 191

Query: 1458 ESC-VCVKLIKCGVIDCNVGISEISVSFGFLVLGEVNGVRVFSVRQLVKGRVKRKEKRIG 1282
                V +KL KC VIDC V +  ISVS  FL+LGE NGVRVF +R LVKG ++++++   
Sbjct: 192  RDDGVVLKLRKCAVIDCGVPVFSISVSGEFLILGEENGVRVFQLRPLVKGWIRKEQRESK 251

Query: 1281 SGGSSYACLGNGNCRGNEPAEMSSDG-CTGKTEMNNASAKLRARTLKQDS----AVFVAF 1117
            +      C G+ +       E++ +G   G+T+++  S K R+   +QDS    A FVAF
Sbjct: 252  NLNFPNGC-GSKSAGVEANMEIACNGDLEGRTDLHRVSVKRRSVRFRQDSSEGSACFVAF 310

Query: 1116 D-----NLEAPTEKFSTIKAVSIHSLSQKKFIILDSVGDLHLLCLFSMLSGSEVTGHLRS 952
                  +L++       +KAVSI +LS KKF+ILDS GD+HLLCL     GSE+T H+R 
Sbjct: 311  KGKEVGHLKSMMPPLIPVKAVSIQALSAKKFLILDSDGDVHLLCLSIYHLGSEITCHMRQ 370

Query: 951  LNHLIKVQMLAVLPDVSTSTQTFWISDGFYSLHAISLSDMEASLNENDASEMEEKRVQIS 772
              + +KVQ LAVLPD ST  +T WISDGFYS+H +++SD + S NE+D ++ EEK  QIS
Sbjct: 371  FTNTMKVQKLAVLPDTSTRGRTVWISDGFYSVHMMTVSDTDTSANEDDENDSEEKLKQIS 430

Query: 771  AIEAVFASEKIQNLIPLSANAVLILGQGNIFAYAIS 664
              +A+FASE+IQ++IPL+ANA+LILGQG++FAYAIS
Sbjct: 431  VTQAIFASERIQDIIPLAANALLILGQGSLFAYAIS 466


>ref|XP_002882236.1| hypothetical protein ARALYDRAFT_340395 [Arabidopsis lyrata subsp.
            lyrata] gi|297328076|gb|EFH58495.1| hypothetical protein
            ARALYDRAFT_340395 [Arabidopsis lyrata subsp. lyrata]
          Length = 487

 Score =  229 bits (585), Expect = 2e-57
 Identities = 161/456 (35%), Positives = 255/456 (55%), Gaps = 30/456 (6%)
 Frame = -2

Query: 1971 IMQATKLSLPCNPS---SSSQITSLLFEPISNTLATMHTDSSIHLXXXXXXXXXXXXXXX 1801
            I++ +KL LP NPS   SS Q++S+L+EPIS++LA   +DSSI L               
Sbjct: 3    IVRTSKLDLP-NPSLSPSSPQVSSILYEPISSSLALTLSDSSISLYPSLSPLSTPSLSYP 61

Query: 1800 XXXXXF-CTSSTFFHLQS-SPNSPSHT--------LFLVAGPKKADSRIYLRFWILEKSK 1651
                   C+S++F  L+S +PNS   +         F+VAGP +  SR+ LRF+ L + K
Sbjct: 62   QTLIPSPCSSASFLLLRSQNPNSNDDSGNEASPRVFFIVAGPYRGGSRLLLRFYGLREGK 121

Query: 1650 NL-FLKARLECNQRGFFIDDKKYGVLIDLCHGXXXXXXXXXXXXVLHSVSERKIWVFSAK 1474
            N  F++A++ C+Q+G   D +K GVL++L HG             ++SVS  KI +F  K
Sbjct: 122  NKGFVRAKVICDQKGIEFD-QKVGVLLNLSHGVSVKIVGSTNYFSMYSVSSSKILIFGLK 180

Query: 1473 VXXXXESC-----VCVKLIKCGVIDCNVGISEISVSFGFLVLGEVNGVRVFSVRQLVKGR 1309
            V     +C     V VKL++CG I+C   +  I +  G L+LGE +GVRV ++R++VKGR
Sbjct: 181  VVTDGSNCGDDDAVVVKLVRCGEIECVRPVWSIGIFSGLLILGEDDGVRVLNLREIVKGR 240

Query: 1308 VKRKEKRIGSGGSSYACLGNGNC---RGNEPAEMSSDGCTGKTEMNNASAKLRARTLKQD 1138
            +K+  K  G        L NG+    +  E A   + G   K    ++  ++   + +++
Sbjct: 241  LKKGRKDNGR-------LRNGHIVEVKKKENAVHVNKGLLSKRRQGSSETRMCFVSFQKN 293

Query: 1137 SAVFVAFDNLEAPTEKFSTIKAVSIHSLSQKKFIILDSVGDLHLLCLFSMLS-GSEVTGH 961
            +A   A  +L++ T    +++A+SI +LS K+F+ILDS G +H+L +    S GS  T  
Sbjct: 294  AAAVGA--DLKSETCVVMSLRAISIQALSIKRFLILDSAGYIHVLHVSGRHSLGSNFTCD 351

Query: 960  LRSLNHLIKVQMLAVLPDVSTSTQTFWISDGFYSLHAISLSDMEASLNENDA-SEMEEKR 784
            ++ L   + VQ LA+LP++S  T++FWISDG YS+H +++SD E +  E D   ++ E+R
Sbjct: 352  MQQLPRFMDVQKLALLPEISVGTKSFWISDGDYSVHRVTISDEETTSKEKDEDKKIREER 411

Query: 783  VQISAIE------AVFASEKIQNLIPLSANAVLILG 694
              I + +       +F+ EKIQ+L+PL  N  LILG
Sbjct: 412  PPIQSSDYGAVTHTIFSPEKIQDLVPLGGNGALILG 447


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