BLASTX nr result

ID: Coptis24_contig00010232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010232
         (1085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328885.1| predicted protein [Populus trichocarpa] gi|2...   496   e-138
ref|XP_003633787.1| PREDICTED: uridine kinase-like protein 1, ch...   494   e-137
ref|XP_002298617.1| predicted protein [Populus trichocarpa] gi|2...   491   e-136
ref|XP_003553920.1| PREDICTED: uridine kinase-like protein 1, ch...   486   e-135
ref|XP_003547653.1| PREDICTED: uridine kinase-like protein 1, ch...   486   e-135

>ref|XP_002328885.1| predicted protein [Populus trichocarpa] gi|222839315|gb|EEE77652.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  496 bits (1277), Expect = e-138
 Identities = 243/304 (79%), Positives = 266/304 (87%), Gaps = 5/304 (1%)
 Frame = +3

Query: 189  LMEAASGAHFSGLRLDXXXXXXXXXXXXXXXXXXXDKN-----KQPFVIGVCGGTASGKT 353
            +ME ASG HFSGLRLD                     +     KQPFVIGV GGTASGKT
Sbjct: 11   VMEKASGPHFSGLRLDGLLSSPPSSSTASPSHRSASASESNAPKQPFVIGVSGGTASGKT 70

Query: 354  TVCDMIIQQLHDHRVVLVNQESFYRGLTAEEAEHVHDYNFDHPDAFDTEQLLECVLKFKS 533
            TVCDMIIQQLHDHRVVLVNQ+SFYRGLTAEE++ VH+YNFDHPDAFDTEQLL+CV K +S
Sbjct: 71   TVCDMIIQQLHDHRVVLVNQDSFYRGLTAEESKRVHEYNFDHPDAFDTEQLLDCVQKMRS 130

Query: 534  GQSVQVPIYDFKNHRRCSETFRQLNASDVIILEGILIFHDQRVRNLMNMKIFVDTDADVR 713
            G S QVPIYDFK+HRRCS++FRQ+NASDVIILEGIL+FHDQRVRNLMNMKIFVDTDADVR
Sbjct: 131  GHSYQVPIYDFKSHRRCSDSFRQVNASDVIILEGILVFHDQRVRNLMNMKIFVDTDADVR 190

Query: 714  LIRRIRRDNLERGRDVNSVLDQYTKFVKPAFDDFILPSKKYADVIIPRGGDNHVAVDLIV 893
            L RRIRRD +ERGRD+NSVL+QY KFVKPAFDDF+LPSKKYADVIIPRGGDNHVA+DLIV
Sbjct: 191  LARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIV 250

Query: 894  QHIRTKLGQHDLCKIYPNVYLIQSTFQIRGMHTLIRDREITKHDFVFYSDRLIRLVVEHG 1073
            QHI TKLGQHDLCKIYPNV++IQSTFQIRGMHTLIRD+EI+KHDFVFYSDRLIRLV+EHG
Sbjct: 251  QHIHTKLGQHDLCKIYPNVHVIQSTFQIRGMHTLIRDKEISKHDFVFYSDRLIRLVLEHG 310

Query: 1074 LGHL 1085
            LGHL
Sbjct: 311  LGHL 314


>ref|XP_003633787.1| PREDICTED: uridine kinase-like protein 1, chloroplastic-like isoform
            1 [Vitis vinifera]
          Length = 482

 Score =  494 bits (1273), Expect = e-137
 Identities = 246/309 (79%), Positives = 264/309 (85%), Gaps = 10/309 (3%)
 Frame = +3

Query: 189  LMEAASGAHFSGLRLDXXXXXXXXXXXXXXXXXXXDKN----------KQPFVIGVCGGT 338
            +MEAASG HFSGLRL+                     +          KQPFVIGV GGT
Sbjct: 11   VMEAASGPHFSGLRLEGLLSSPPSATSSPSAAASATSSFSATLPDSAAKQPFVIGVSGGT 70

Query: 339  ASGKTTVCDMIIQQLHDHRVVLVNQESFYRGLTAEEAEHVHDYNFDHPDAFDTEQLLECV 518
            ASGKTTVCDMIIQQLHDHRVVLVNQ+SFYRGLTAEE+E VH+YNFDHPDAFDTEQLLEC+
Sbjct: 71   ASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTAEESERVHEYNFDHPDAFDTEQLLECI 130

Query: 519  LKFKSGQSVQVPIYDFKNHRRCSETFRQLNASDVIILEGILIFHDQRVRNLMNMKIFVDT 698
             K KSGQSV VPIYDFKNHRRCS +FRQ+N SDVIILEGIL+FHDQRVRNLMNMKIFVDT
Sbjct: 131  GKLKSGQSVHVPIYDFKNHRRCSGSFRQVNVSDVIILEGILVFHDQRVRNLMNMKIFVDT 190

Query: 699  DADVRLIRRIRRDNLERGRDVNSVLDQYTKFVKPAFDDFILPSKKYADVIIPRGGDNHVA 878
            DADVRL RRIRRD +ERGRDVNSVL+QY KFVKPAFDDF++PSKKYADVIIPRGGDNHVA
Sbjct: 191  DADVRLARRIRRDTVERGRDVNSVLEQYAKFVKPAFDDFVMPSKKYADVIIPRGGDNHVA 250

Query: 879  VDLIVQHIRTKLGQHDLCKIYPNVYLIQSTFQIRGMHTLIRDREITKHDFVFYSDRLIRL 1058
            +DLIVQHI TKLGQH+LCKIYPNV +IQSTFQIRGMHTLIRD EI+KHDFVFYSDRLIRL
Sbjct: 251  IDLIVQHIHTKLGQHNLCKIYPNVNVIQSTFQIRGMHTLIRDHEISKHDFVFYSDRLIRL 310

Query: 1059 VVEHGLGHL 1085
            VVEHGLGHL
Sbjct: 311  VVEHGLGHL 319


>ref|XP_002298617.1| predicted protein [Populus trichocarpa] gi|222845875|gb|EEE83422.1|
            predicted protein [Populus trichocarpa]
          Length = 481

 Score =  491 bits (1265), Expect = e-136
 Identities = 244/308 (79%), Positives = 264/308 (85%), Gaps = 9/308 (2%)
 Frame = +3

Query: 189  LMEAASGAHFSGLRLDXXXXXXXXXXXXXXXXXXX-------DKN--KQPFVIGVCGGTA 341
            +ME ASG HFSGLRLD                          D N   QPFVIGV GGTA
Sbjct: 11   VMEKASGPHFSGLRLDGLLSSPPSSTASPSHCSATASSSALSDSNAPNQPFVIGVSGGTA 70

Query: 342  SGKTTVCDMIIQQLHDHRVVLVNQESFYRGLTAEEAEHVHDYNFDHPDAFDTEQLLECVL 521
            SGKTTVCDMIIQQLHDHRVVLVNQ+SFYRGLT EE++ VH+YNFDHPDAFDTEQLL+C+ 
Sbjct: 71   SGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEESKRVHEYNFDHPDAFDTEQLLDCIQ 130

Query: 522  KFKSGQSVQVPIYDFKNHRRCSETFRQLNASDVIILEGILIFHDQRVRNLMNMKIFVDTD 701
            K + GQS QVPIYDFKNHRR SE+FRQ+NASDVIILEGIL+FHDQRVRNLMNMKIFVDTD
Sbjct: 131  KLRGGQSYQVPIYDFKNHRRSSESFRQVNASDVIILEGILVFHDQRVRNLMNMKIFVDTD 190

Query: 702  ADVRLIRRIRRDNLERGRDVNSVLDQYTKFVKPAFDDFILPSKKYADVIIPRGGDNHVAV 881
            ADVRL RRIRRD +ERGRD+NSVL+QY KFVKPAFDDF+LPSKKYADVIIPRGGDNHVA+
Sbjct: 191  ADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAI 250

Query: 882  DLIVQHIRTKLGQHDLCKIYPNVYLIQSTFQIRGMHTLIRDREITKHDFVFYSDRLIRLV 1061
            DLIVQHI TKLGQHDLCKIYPNV++IQSTFQIRGMHTLIRD+EI+KHDFVFYSDRLIRLV
Sbjct: 251  DLIVQHIHTKLGQHDLCKIYPNVHVIQSTFQIRGMHTLIRDKEISKHDFVFYSDRLIRLV 310

Query: 1062 VEHGLGHL 1085
            VEHGLGHL
Sbjct: 311  VEHGLGHL 318


>ref|XP_003553920.1| PREDICTED: uridine kinase-like protein 1, chloroplastic-like [Glycine
            max]
          Length = 476

 Score =  486 bits (1252), Expect = e-135
 Identities = 241/303 (79%), Positives = 259/303 (85%), Gaps = 4/303 (1%)
 Frame = +3

Query: 189  LMEAASGAHFSGLRLDXXXXXXXXXXXXXXXXXXXDKN----KQPFVIGVCGGTASGKTT 356
            +MEAASG HFSGLRLD                           QPFVIGV GGTASGKTT
Sbjct: 11   VMEAASGPHFSGLRLDGRMPSSATAAAASSSADSTLTPDFLPNQPFVIGVSGGTASGKTT 70

Query: 357  VCDMIIQQLHDHRVVLVNQESFYRGLTAEEAEHVHDYNFDHPDAFDTEQLLECVLKFKSG 536
            VCDMIIQQLHDHRVVLVNQ+SFYRGL  EE E VH+YNFDHPDAFDTEQLLEC +K  SG
Sbjct: 71   VCDMIIQQLHDHRVVLVNQDSFYRGLNPEELERVHEYNFDHPDAFDTEQLLECTMKLISG 130

Query: 537  QSVQVPIYDFKNHRRCSETFRQLNASDVIILEGILIFHDQRVRNLMNMKIFVDTDADVRL 716
            Q V VPIYDFK H+R S++FRQ+NASDVIILEGIL+FHDQRVR+LMNMKIFVDTDADVRL
Sbjct: 131  QGVHVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRL 190

Query: 717  IRRIRRDNLERGRDVNSVLDQYTKFVKPAFDDFILPSKKYADVIIPRGGDNHVAVDLIVQ 896
             RRIRRD +ERGRD+NSVL+QY KFVKPAFDDF+LPSKKYADVIIPRGGDNHVA+DLIVQ
Sbjct: 191  ARRIRRDTMERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQ 250

Query: 897  HIRTKLGQHDLCKIYPNVYLIQSTFQIRGMHTLIRDREITKHDFVFYSDRLIRLVVEHGL 1076
            HIRTKLGQHDLCKIYPN Y+IQSTFQIRGMHTLIRDR+I+KHDFVFYSDRLIRLVVEHGL
Sbjct: 251  HIRTKLGQHDLCKIYPNAYVIQSTFQIRGMHTLIRDRDISKHDFVFYSDRLIRLVVEHGL 310

Query: 1077 GHL 1085
            GHL
Sbjct: 311  GHL 313


>ref|XP_003547653.1| PREDICTED: uridine kinase-like protein 1, chloroplastic-like [Glycine
            max]
          Length = 474

 Score =  486 bits (1251), Expect = e-135
 Identities = 241/301 (80%), Positives = 259/301 (86%), Gaps = 2/301 (0%)
 Frame = +3

Query: 189  LMEAASGAHFSGLRLDXXXXXXXXXXXXXXXXXXXDKN--KQPFVIGVCGGTASGKTTVC 362
            +MEAASG HFSGLRLD                     +   QPFVIGV GGTASGKTTVC
Sbjct: 11   VMEAASGPHFSGLRLDGRVPSSATAASSTPDSTLTLDSLPNQPFVIGVSGGTASGKTTVC 70

Query: 363  DMIIQQLHDHRVVLVNQESFYRGLTAEEAEHVHDYNFDHPDAFDTEQLLECVLKFKSGQS 542
            DMIIQQLHDHRVVLVNQ+SFYRGL  EE E VH+YNFDHPDAFDTEQLLEC  K  SGQ 
Sbjct: 71   DMIIQQLHDHRVVLVNQDSFYRGLNPEELERVHEYNFDHPDAFDTEQLLECTRKLISGQG 130

Query: 543  VQVPIYDFKNHRRCSETFRQLNASDVIILEGILIFHDQRVRNLMNMKIFVDTDADVRLIR 722
            V VPIYDFK H+R S++FRQ+NASDVIILEGIL+FHDQRVR+LMNMKIFVD DADVRL R
Sbjct: 131  VHVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDADADVRLAR 190

Query: 723  RIRRDNLERGRDVNSVLDQYTKFVKPAFDDFILPSKKYADVIIPRGGDNHVAVDLIVQHI 902
            RIRRD +ERGRD+NSVL+QY KFVKPAFDDF+LPSKKYADVIIPRGGDNHVA+DLIVQHI
Sbjct: 191  RIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHI 250

Query: 903  RTKLGQHDLCKIYPNVYLIQSTFQIRGMHTLIRDREITKHDFVFYSDRLIRLVVEHGLGH 1082
            RTKLGQHDLCKIYPNVY+IQSTFQIRGMHTLIRDR+I+KHDFVFYSDRLIRLVVEHGLGH
Sbjct: 251  RTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRDISKHDFVFYSDRLIRLVVEHGLGH 310

Query: 1083 L 1085
            L
Sbjct: 311  L 311


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