BLASTX nr result

ID: Coptis24_contig00010229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010229
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544665.1| PREDICTED: PXMP2/4 family protein 2-like iso...   337   3e-90
ref|XP_002284227.1| PREDICTED: protein Mpv17 [Vitis vinifera] gi...   337   3e-90
emb|CAN61516.1| hypothetical protein VITISV_033965 [Vitis vinifera]   337   3e-90
ref|XP_002885656.1| hypothetical protein ARALYDRAFT_479971 [Arab...   330   2e-88
ref|XP_002324994.1| predicted protein [Populus trichocarpa] gi|2...   330   2e-88

>ref|XP_003544665.1| PREDICTED: PXMP2/4 family protein 2-like isoform 1 [Glycine max]
          Length = 210

 Score =  337 bits (863), Expect = 3e-90
 Identities = 154/210 (73%), Positives = 177/210 (84%)
 Frame = +3

Query: 60  MLKLWKCYQNCLTVHPVKTQIISSGLLWGVGDIAAQTITHATLKKKHQNNSDGGETFKIN 239
           ML+LWK YQNCL VHPVKTQ+ISSGL+WG GDIAAQ +TH T KK+   ++D  + FKIN
Sbjct: 1   MLRLWKWYQNCLAVHPVKTQVISSGLIWGAGDIAAQAVTHYTAKKRVTFDADDTKEFKIN 60

Query: 240 WKRAAITGMFGLGFVGPVGHFWYEALDRFIRVRLKYPPRSVRFVATKVVVDGLIFGPLDL 419
           W+R + T +FGLGFVGPVGHFWYE LDRFIR++L   P S RFVATKV VDG IFGPLDL
Sbjct: 61  WRRVSTTSLFGLGFVGPVGHFWYEGLDRFIRLKLMLKPNSFRFVATKVAVDGFIFGPLDL 120

Query: 420 FVFFTYMGFANGKSVTQVKEDVKRDFLPALVVEGGIWPLLQVANFRYVPVRYQLLYVNVF 599
            VFFTYMGF+ GKSV QVKEDVKRDFLPA V+EGGIWP++QVANFR++PVRYQLLYVN F
Sbjct: 121 LVFFTYMGFSAGKSVPQVKEDVKRDFLPAFVLEGGIWPIVQVANFRFIPVRYQLLYVNFF 180

Query: 600 CLLDSAFLSWIEQQEDAKWKKWFTSTLPIK 689
           CLLDS FLSW+EQQ+DA WK+W  S LP+K
Sbjct: 181 CLLDSCFLSWVEQQQDAPWKQWLKSFLPMK 210


>ref|XP_002284227.1| PREDICTED: protein Mpv17 [Vitis vinifera]
           gi|296081890|emb|CBI20895.3| unnamed protein product
           [Vitis vinifera]
          Length = 218

 Score =  337 bits (863), Expect = 3e-90
 Identities = 154/215 (71%), Positives = 180/215 (83%)
 Frame = +3

Query: 60  MLKLWKCYQNCLTVHPVKTQIISSGLLWGVGDIAAQTITHATLKKKHQNNSDGGETFKIN 239
           +L+LWK YQ+CL VHPVKTQIISSGL+WG GDI AQTITH T K+ HQ   +  E  KIN
Sbjct: 3   LLRLWKWYQDCLAVHPVKTQIISSGLIWGFGDICAQTITHTTAKRHHQIGDEDKE-LKIN 61

Query: 240 WKRAAITGMFGLGFVGPVGHFWYEALDRFIRVRLKYPPRSVRFVATKVVVDGLIFGPLDL 419
           W+R A T +FG GFVGPVGHFWYE LDR IR RL+  P+S RFVA KV +DG+IFGPLDL
Sbjct: 62  WRRVATTSLFGFGFVGPVGHFWYEGLDRLIRHRLQLQPKSFRFVAAKVAIDGIIFGPLDL 121

Query: 420 FVFFTYMGFANGKSVTQVKEDVKRDFLPALVVEGGIWPLLQVANFRYVPVRYQLLYVNVF 599
            VFF+YMGF+ GKSV QVKEDVKRDFLPAL++EGGIWP++QV NFR++PVRYQLLYVN F
Sbjct: 122 LVFFSYMGFSTGKSVAQVKEDVKRDFLPALILEGGIWPIVQVVNFRFIPVRYQLLYVNFF 181

Query: 600 CLLDSAFLSWIEQQEDAKWKKWFTSTLPIKEEESQ 704
           CLLDS+FLSW+EQQ+DA WK+WFTS L +KE+E Q
Sbjct: 182 CLLDSSFLSWVEQQQDAPWKQWFTSFLALKEKEGQ 216


>emb|CAN61516.1| hypothetical protein VITISV_033965 [Vitis vinifera]
          Length = 218

 Score =  337 bits (863), Expect = 3e-90
 Identities = 154/215 (71%), Positives = 180/215 (83%)
 Frame = +3

Query: 60  MLKLWKCYQNCLTVHPVKTQIISSGLLWGVGDIAAQTITHATLKKKHQNNSDGGETFKIN 239
           +L+LWK YQ+CL VHPVKTQIISSGL+WG GDI AQTITH T K+ HQ   +  E  KIN
Sbjct: 3   LLRLWKWYQDCLAVHPVKTQIISSGLIWGFGDICAQTITHTTAKRXHQIGDEDKE-LKIN 61

Query: 240 WKRAAITGMFGLGFVGPVGHFWYEALDRFIRVRLKYPPRSVRFVATKVVVDGLIFGPLDL 419
           W+R A T +FG GFVGPVGHFWYE LDR IR RL+  P+S RFVA KV +DG+IFGPLDL
Sbjct: 62  WRRVATTSLFGFGFVGPVGHFWYEGLDRLIRHRLQLQPKSFRFVAAKVAIDGIIFGPLDL 121

Query: 420 FVFFTYMGFANGKSVTQVKEDVKRDFLPALVVEGGIWPLLQVANFRYVPVRYQLLYVNVF 599
            VFF+YMGF+ GKSV QVKEDVKRDFLPAL++EGGIWP++QV NFR++PVRYQLLYVN F
Sbjct: 122 LVFFSYMGFSTGKSVAQVKEDVKRDFLPALILEGGIWPIVQVVNFRFIPVRYQLLYVNFF 181

Query: 600 CLLDSAFLSWIEQQEDAKWKKWFTSTLPIKEEESQ 704
           CLLDS+FLSW+EQQ+DA WK+WFTS L +KE+E Q
Sbjct: 182 CLLDSSFLSWVEQQQDAPWKQWFTSFLALKEKEGQ 216


>ref|XP_002885656.1| hypothetical protein ARALYDRAFT_479971 [Arabidopsis lyrata subsp.
           lyrata] gi|297331496|gb|EFH61915.1| hypothetical protein
           ARALYDRAFT_479971 [Arabidopsis lyrata subsp. lyrata]
          Length = 225

 Score =  330 bits (846), Expect = 2e-88
 Identities = 151/222 (68%), Positives = 180/222 (81%), Gaps = 7/222 (3%)
 Frame = +3

Query: 60  MLKLWKCYQNCLTVHPVKTQIISSGLLWGVGDIAAQTITHATLKKK------HQNNSDGG 221
           MLKLW+ YQ CLTVHPVKTQ+ISSG LWG GD+ AQ ITH+T K +         ++D  
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKPRLLRLTETNKDADAD 60

Query: 222 ETFKINWKRAAITGMFGLGFVGPVGHFWYEALDRFIRVRLKYPPRSVRFVATKVVVDGLI 401
             FK+NWKR AIT MFG GFVGPVGHFWYE LD+FI+++L+Y P+S RFVA KV +DGLI
Sbjct: 61  AEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGLI 120

Query: 402 FGPLDLFVFFTYMGFANGKSVTQVKEDVKRDFLPALVVEGGIWPLLQVANFRYVPVRYQL 581
           FGP+DL VFFTYMGFA GK+  +VKE +KRDFLPAL +EGG WPLLQ+ANFRYVPV+YQL
Sbjct: 121 FGPIDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQYQL 180

Query: 582 LYVNVFCLLDSAFLSWIEQQEDAKWKKWFTSTL-PIKEEESQ 704
           LYVN+FCL+DSAFLSW+EQQ+DA WK+WFTS+  P+KE   Q
Sbjct: 181 LYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQ 222


>ref|XP_002324994.1| predicted protein [Populus trichocarpa] gi|222866428|gb|EEF03559.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  330 bits (846), Expect = 2e-88
 Identities = 158/228 (69%), Positives = 179/228 (78%), Gaps = 17/228 (7%)
 Frame = +3

Query: 60  MLKLWKCYQNCLTVHPVKTQIISSGLLWGVGDIAAQTITHAT-----------------L 188
           MLK WK YQ+CL+ HPVKTQI+SSG LWG+GDI AQ ITH+T                 L
Sbjct: 1   MLKAWKWYQHCLSSHPVKTQIVSSGTLWGIGDIGAQYITHSTATSLLPKSVTSLRIGDLL 60

Query: 189 KKKHQNNSDGGETFKINWKRAAITGMFGLGFVGPVGHFWYEALDRFIRVRLKYPPRSVRF 368
              +  N++G E FKINWKR AIT MFG GFVGPVGHFWYE LDRFIR+R    P+S RF
Sbjct: 61  LVIYFKNNEGAE-FKINWKRVAITSMFGFGFVGPVGHFWYEGLDRFIRLRFLLQPKSPRF 119

Query: 369 VATKVVVDGLIFGPLDLFVFFTYMGFANGKSVTQVKEDVKRDFLPALVVEGGIWPLLQVA 548
           VATKV  DG+IFGP DLFVFFTYMGF+ GK+V QVKEDVKRDFLPAL++EGG+WP+ QV 
Sbjct: 120 VATKVAADGIIFGPFDLFVFFTYMGFSTGKNVAQVKEDVKRDFLPALILEGGVWPIFQVV 179

Query: 549 NFRYVPVRYQLLYVNVFCLLDSAFLSWIEQQEDAKWKKWFTSTLPIKE 692
           NFRYVPVRYQLLYVNVFCL+DSAFLSWIEQQ+DA WK+WFTS  P+KE
Sbjct: 180 NFRYVPVRYQLLYVNVFCLIDSAFLSWIEQQKDAPWKQWFTSFQPLKE 227


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