BLASTX nr result

ID: Coptis24_contig00010221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010221
         (2131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75603.1| hypothetical protein VITISV_016382 [Vitis vinifera]   246   2e-62
ref|XP_002315275.1| predicted protein [Populus trichocarpa] gi|2...   234   5e-59
ref|XP_002326168.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-43
ref|XP_002523905.1| hypothetical protein RCOM_1068550 [Ricinus c...   178   6e-42
ref|XP_003633464.1| PREDICTED: uncharacterized protein LOC100852...   174   1e-40

>emb|CAN75603.1| hypothetical protein VITISV_016382 [Vitis vinifera]
          Length = 1887

 Score =  246 bits (627), Expect = 2e-62
 Identities = 182/492 (36%), Positives = 240/492 (48%), Gaps = 28/492 (5%)
 Frame = -2

Query: 2130 VSYNDEEALSENAKLRTQDQTTSKHEYGFDGGLHPSKKNRSLSELMAGK----------- 1984
            + +  +  + ++ K + Q+ ++ K ++      +P KK RSLSELM+G            
Sbjct: 1458 MEHETDVLMGDDGKFKIQNSSSHKRKHNLKDSAYPRKKERSLSELMSGMAYSPDDENDSD 1517

Query: 1983 --------KASSRKRMAVDSFSEEALKSVKRMPSFSTNEDAKTSTP---QSFKVGDCLRR 1837
                     +S RKR  VDSF  ++ +   R  S    + + TS P   QSFKVGDC+RR
Sbjct: 1518 GKATSKPVSSSGRKRKVVDSFGNDS-EVQDRTESIFVAKVSNTSAPSPRQSFKVGDCIRR 1576

Query: 1836 IASQMTGSPPILKSSDVRFRKGSAKLEMDNEKLDGSGGSPYISEGSHRRRVTLPKEYSSP 1657
             ASQ+TGSP ILK S  R +K    ++    KL G G    +      +R+ +P EY S 
Sbjct: 1577 AASQLTGSPSILKCSGERPQK---VVDGSIGKLGGPGSDVSLMSPEDPQRMIIPMEYPSL 1633

Query: 1656 DEMLSQLCLAARDPMKGYSFLTTIVGFFTDFRNSISLELSNSGKHKRSDKTSGGKAGTGI 1477
            DEMLSQL LAARDPMKGYSFL TIV FF++FRNSI L   +  +    DK +G +     
Sbjct: 1634 DEMLSQLRLAARDPMKGYSFLDTIVSFFSEFRNSILLGRYSGRESLTMDKVAGNR----- 1688

Query: 1476 RKPSNMKTDSTKTFDFEDMGGDSYWTDRVVQSSPE------EQPPRRNRKRKEEYQFAIA 1315
            RK S+    S + F+FEDM  D+YWTDRV+Q++ E      EQPPR  RKRKE  QF   
Sbjct: 1689 RKKSSQPIGSPEEFEFEDM-NDTYWTDRVIQNTSEEQPEQPEQPPRSARKRKEP-QF--- 1743

Query: 1314 AELDTSSFEAEVPVQFSLALDFEGQNIDENFDLAXXXXXXXXXXXXXXSQHVLPTDEDTA 1135
                  S + E   Q         +  D N +LA                          
Sbjct: 1744 -----GSTDPEKSPQLGRRSYSRKRYSDGNHELA-------------------------- 1772

Query: 1134 LNSELLGLCDYDLVSDMPTSSSYEYDYVNEFPPAALLMSFPESGCIPSVMNLNKIFRRFG 955
                            +   ++Y  +   E  PA L+++FPE   +PS M LNK      
Sbjct: 1773 ----------------VEKPANYVDEKERELLPAELILNFPEVDSVPSEMILNK------ 1810

Query: 954  XXXXXXXXXXXXXXXKIFRRFGALKESETEVMRDMCSARVVFKKQSDAEVALSSAAKFGI 775
                            +FRRFG LKESETEV R    ARVVFK+ SDAEVA SSA    I
Sbjct: 1811 ----------------MFRRFGPLKESETEVDRVTSRARVVFKRCSDAEVAFSSAGMINI 1854

Query: 774  FGPVHVSYQLSF 739
            FGP HV+YQL++
Sbjct: 1855 FGPTHVNYQLNY 1866


>ref|XP_002315275.1| predicted protein [Populus trichocarpa] gi|222864315|gb|EEF01446.1|
            predicted protein [Populus trichocarpa]
          Length = 1405

 Score =  234 bits (598), Expect = 5e-59
 Identities = 169/484 (34%), Positives = 244/484 (50%), Gaps = 22/484 (4%)
 Frame = -2

Query: 2124 YNDEEALSENAK-LRTQDQTTSKHEYGFDGGLHPSKKNRSLSELMA-------------G 1987
            Y D   +S   + L+TQ  ++ K ++     ++P KK R+LS+L++             G
Sbjct: 1002 YEDHGQISSGEEILQTQRGSSHKRKHNLKDSIYPRKKERNLSDLISDSWDSVGDEIGSDG 1061

Query: 1986 K------KASSRKRMAVDSFSEEALKSVKRMPSFSTNEDAKTSTPQSFKVGDCLRRIASQ 1825
            K        S +KR   D+F+++A  + +R  + S  + + T+   SFK+G+C++R+ASQ
Sbjct: 1062 KANSMLVSPSGKKRKGSDTFADDAYMTGRRK-TISFAKVSSTALKPSFKIGECIQRVASQ 1120

Query: 1824 MTGSPPILKSSDVRFRKGSAKLEMDNEKL--DGSGGSPYISEGSHRRRVTLPKEYSSPDE 1651
            MTGSP ILK +       S K++  ++ L  DGS  S   SE +  +R+ +P EYSS D+
Sbjct: 1121 MTGSPSILKCN-------SPKVDGSSDGLVGDGSDASFLHSEDAEIKRIIVPTEYSSLDD 1173

Query: 1650 MLSQLCLAARDPMKGYSFLTTIVGFFTDFRNSISLELSNSGKHKRSDKTSGGKAGTGIRK 1471
            +LSQL L A+DP+KGY FL  I+ FF+DFRNS+ ++        + DK SG       RK
Sbjct: 1174 LLSQLHLTAQDPLKGYGFLNIIISFFSDFRNSVVMD--------QHDKVSGK------RK 1219

Query: 1470 PSNMKTDSTKTFDFEDMGGDSYWTDRVVQSSPEEQPPRRNRKRKEEYQFAIAAELDTSSF 1291
             S+      +TF+FEDM  D+YWTDRV+Q+  EEQPPR++RKR   +   +   LD  S 
Sbjct: 1220 TSHSSGGFPETFEFEDM-NDTYWTDRVIQNGSEEQPPRKSRKRDNLF---VPVVLDKPSG 1275

Query: 1290 EAEVPVQFSLALDFEGQNIDENFDLAXXXXXXXXXXXXXXSQHVLPTDEDTALNSELLGL 1111
             +    Q+S          D N+D+                                   
Sbjct: 1276 RSNSRKQYS----------DSNYDV----------------------------------- 1290

Query: 1110 CDYDLVSDMPTSSSYEYDYVNEFPPAALLMSFPESGCIPSVMNLNKIFRRFGXXXXXXXX 931
                       S+     YV+E  PA L+M FP    +PS ++LNK              
Sbjct: 1291 -----------SAQKPAGYVDEKAPAELVMHFPVVDSVPSEISLNK-------------- 1325

Query: 930  XXXXXXXKIFRRFGALKESETEVMRDMCSARVVFKKQSDAEVALSSAAKFGIFGPVHVSY 751
                    +FRRFG LKESETEV RD   ARV+FK+ SDAE A  SA KF IFGP+ V+Y
Sbjct: 1326 --------MFRRFGPLKESETEVDRDTNRARVIFKRCSDAEAAYGSAPKFNIFGPILVNY 1377

Query: 750  QLSF 739
            QL++
Sbjct: 1378 QLNY 1381


>ref|XP_002326168.1| predicted protein [Populus trichocarpa] gi|222833361|gb|EEE71838.1|
            predicted protein [Populus trichocarpa]
          Length = 918

 Score =  181 bits (459), Expect = 7e-43
 Identities = 138/483 (28%), Positives = 217/483 (44%), Gaps = 23/483 (4%)
 Frame = -2

Query: 2118 DEEALSENAKLRTQDQTTSKHEYGFDGGLHPSKKNRSLSELMAGKKASS----------- 1972
            DE   S   K ++ D ++ K ++      HPSKK +SL++L+A +++S+           
Sbjct: 477  DESVSSGKEKPKSADHSSRKRKHISGDKEHPSKKEKSLADLIAERRSSAAKAKCSLDGEA 536

Query: 1971 ----------RKRMAVDSFSEEALKSVKRMPSFSTNEDAKTSTPQSFKVGDCLRRIASQM 1822
                      +KR AV S S++++    + PS S  ++  +   ++++VG+ + R+ASQ+
Sbjct: 537  TGKTTTSSSGKKRKAVKSISDDSMMKQSKSPSSSGVDNGSSQPKKTYRVGESILRVASQL 596

Query: 1821 TGSPPILKSSDVRFRKGSAKLEMDNEKLDGSGGSPYISEGSHRRRVTLPKEYSSPDEMLS 1642
             GS PILKS + +    +++      K               + + T  K  +SPDE++S
Sbjct: 597  NGSTPILKSVNGKSVNTTSRKNAKKTK--------------SQEKSTSGKSKASPDELVS 642

Query: 1641 QLCLAARDPMKGYSFLTTIVGFFTDFRNSISLELSNSGKHKRS--DKTSGGKAGTGIRKP 1468
            QLCL ARDPMKG +FL ++V FF  FRNS+ +   NS +H +S  +  SGG  G      
Sbjct: 643  QLCLVARDPMKGCNFLKSVVSFFVKFRNSVCINPLNSQQHVQSSLEHISGGDVG------ 696

Query: 1467 SNMKTDSTKTFDFEDMGGDSYWTDRVVQSSPEEQPPRRNRKRKEEYQFAIAAELDTSSFE 1288
                   T+T D E M  DS+WTD++ QS+P+ Q    N+    E       +    +F 
Sbjct: 697  ELSTIVETQTTDSEHM-KDSHWTDKMTQSNPKGQSSHENKNEAREIPEETPTKDGIPTFR 755

Query: 1287 AEVPVQFSLALDFEGQNIDENFDLAXXXXXXXXXXXXXXSQHVLPTDEDTALNSELLGLC 1108
             +  VQ    L+ E        DL                    P D      ++    C
Sbjct: 756  KQSAVQLEPNLECELHIAGGILDLGAGK----------------PIDHLEGKRNDDSSPC 799

Query: 1107 DYDLVSDMPTSSSYEYDYVNEFPPAALLMSFPESGCIPSVMNLNKIFRRFGXXXXXXXXX 928
                                   P AL+++F +   +PS  NLN                
Sbjct: 800  -----------------------PTALILNFTDLDAVPSETNLN---------------- 820

Query: 927  XXXXXXKIFRRFGALKESETEVMRDMCSARVVFKKQSDAEVALSSAAKFGIFGPVHVSYQ 748
                  +IF  FG LKE+ET+V++    A+VVF + +DAE A SSA K+ +FGP  VSY+
Sbjct: 821  ------RIFSHFGPLKETETQVLKKTKRAKVVFCRSADAETAFSSAGKYSVFGPSLVSYR 874

Query: 747  LSF 739
            L +
Sbjct: 875  LKY 877


>ref|XP_002523905.1| hypothetical protein RCOM_1068550 [Ricinus communis]
            gi|223536835|gb|EEF38474.1| hypothetical protein
            RCOM_1068550 [Ricinus communis]
          Length = 1557

 Score =  178 bits (451), Expect = 6e-42
 Identities = 123/288 (42%), Positives = 163/288 (56%), Gaps = 28/288 (9%)
 Frame = -2

Query: 2121 NDEEALSENAKLRTQDQTTSKHEYGFDGGLHPSKKNRSLSELMA-------------GKK 1981
            +D ++ S    L+TQ  +  K ++     ++P KK RSLSELM              GK 
Sbjct: 1149 DDGQSSSGQEILQTQRSSYHKRKHNLKDTIYPRKKERSLSELMDDSWDSVDDEIGADGKP 1208

Query: 1980 A-------SSRKRMAVDSFSEEALKSVKRMPSFSTNEDAKTSTP-----QSFKVGDCLRR 1837
            +       S +KR   DSF+++A     R     T   AK STP      SFK+G+C+RR
Sbjct: 1209 SNKLLSPSSGKKRRGSDSFADDAAMIEGR----KTISLAKVSTPVTLPKPSFKIGECIRR 1264

Query: 1836 IASQMTGSPPILKSSDVRFRKGSAKLEMDNEKLDGSGGSPYI--SEGSHRRRVTLPKEYS 1663
            +ASQMTGSP IL       R  S K +  ++ L G G    I  SE    RR+ +P EYS
Sbjct: 1265 VASQMTGSPSIL-------RPNSQKPDGGSDGLVGDGSDILIQHSEDLEMRRMNVPTEYS 1317

Query: 1662 SPDEMLSQLCLAARDPMKGYSFLTTIVGFFTDFRNSISLELSNSGKHKRSDKTSGGKAGT 1483
            S DE+LSQL LAARDP+KGYSFLT I+ FF+DFRN++ +E       K  DK  GGK   
Sbjct: 1318 SLDELLSQLLLAARDPLKGYSFLTVIISFFSDFRNTVIME-------KHHDKV-GGK--- 1366

Query: 1482 GIRKPSNMK-TDSTKTFDFEDMGGDSYWTDRVVQSSPEEQPPRRNRKR 1342
              R+P+    + S +TF+FEDM  D+YWTDRV+ +  EEQPPR++RKR
Sbjct: 1367 --RRPALPSISGSPETFEFEDM-NDTYWTDRVIHNGSEEQPPRKSRKR 1411



 Score = 78.6 bits (192), Expect = 6e-12
 Identities = 50/113 (44%), Positives = 59/113 (52%)
 Frame = -2

Query: 1077 SSSYEYDYVNEFPPAALLMSFPESGCIPSVMNLNKIFRRFGXXXXXXXXXXXXXXXKIFR 898
            SS     Y +E  PA L+M FP    +PS  +LNK+FRRF                    
Sbjct: 1441 SSEKPVGYSDENAPAELVMHFPVVDSVPSETSLNKMFRRF-------------------- 1480

Query: 897  RFGALKESETEVMRDMCSARVVFKKQSDAEVALSSAAKFGIFGPVHVSYQLSF 739
              G LKE ETE  +D   ARVVFKK SDAE A  SA KF IFG   V+YQL++
Sbjct: 1481 --GPLKEYETETDKDTNRARVVFKKCSDAEAAYGSAPKFNIFGSTLVNYQLNY 1531


>ref|XP_003633464.1| PREDICTED: uncharacterized protein LOC100852955 [Vitis vinifera]
          Length = 264

 Score =  174 bits (440), Expect = 1e-40
 Identities = 127/320 (39%), Positives = 157/320 (49%), Gaps = 6/320 (1%)
 Frame = -2

Query: 1680 LPKEYSSPDEMLSQLCLAARDPMKGYSFLTTIVGFFTDFRNSISLELSNSGKHKRSDKTS 1501
            +P EY S DEMLSQL LAARDPMKGYSFL TIV FF++FRNSI L   +  +    DK +
Sbjct: 3    IPMEYPSLDEMLSQLRLAARDPMKGYSFLDTIVSFFSEFRNSILLGRYSGRESLTMDKVA 62

Query: 1500 GGKAGTGIRKPSNMKTDSTKTFDFEDMGGDSYWTDRVVQSSPE------EQPPRRNRKRK 1339
            G +     RK S+    S + F+FEDM  D+YWTDRV+Q++ E      EQPPR  RKRK
Sbjct: 63   GNR-----RKKSSQPIGSPEEFEFEDM-NDTYWTDRVIQNTSEEQPEQPEQPPRSARKRK 116

Query: 1338 EEYQFAIAAELDTSSFEAEVPVQFSLALDFEGQNIDENFDLAXXXXXXXXXXXXXXSQHV 1159
            E  QF         S + E   Q         +  D N +LA                  
Sbjct: 117  EP-QF--------GSTDPEKSPQLGRRSYSRKRYSDGNHELA------------------ 149

Query: 1158 LPTDEDTALNSELLGLCDYDLVSDMPTSSSYEYDYVNEFPPAALLMSFPESGCIPSVMNL 979
                                    +   ++Y  +   E  PA L+++FPE   +PS M L
Sbjct: 150  ------------------------VEKPANYVDEKERELLPAELILNFPEVDSVPSEMIL 185

Query: 978  NKIFRRFGXXXXXXXXXXXXXXXKIFRRFGALKESETEVMRDMCSARVVFKKQSDAEVAL 799
            NK                      +FRRFG LKESETEV R    ARVVFK+ SDAEVA 
Sbjct: 186  NK----------------------MFRRFGPLKESETEVDRVTSRARVVFKRCSDAEVAF 223

Query: 798  SSAAKFGIFGPVHVSYQLSF 739
            SSA    IFGP HV+YQL++
Sbjct: 224  SSAGMINIFGPTHVNYQLNY 243


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