BLASTX nr result
ID: Coptis24_contig00010218
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010218 (1264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003540429.1| PREDICTED: chitin-inducible gibberellin-resp... 181 3e-43 gb|AEE69131.1| GRAS family transcription factor [Citrus medica v... 179 1e-42 ref|XP_002317558.1| GRAS family transcription factor [Populus tr... 177 4e-42 dbj|BAI94488.1| GRAS family transcription factor [Dianthus caryo... 177 5e-42 ref|XP_002282942.1| PREDICTED: chitin-inducible gibberellin-resp... 177 5e-42 >ref|XP_003540429.1| PREDICTED: chitin-inducible gibberellin-responsive protein 1-like [Glycine max] Length = 571 Score = 181 bits (460), Expect = 3e-43 Identities = 98/213 (46%), Positives = 129/213 (60%), Gaps = 7/213 (3%) Frame = +3 Query: 591 VFRVLAERPGKTPHIRVTGVD------ASLDNSFAVGEWVTSLPRKCMLPIEFHPVPVFA 752 + + LA RPG PH+R+TG+D A D VG+ + + K +P+EFH VPVFA Sbjct: 324 LLQALAARPGGAPHVRITGIDDPVSKYARGDGPEVVGKRLALMSEKFGIPVEFHGVPVFA 383 Query: 753 QDVTLEMLDIRPGEALAVMFPVQLHQNSERSIEIYNNSDKILRMARSLSPKVVTLVDLEF 932 DVT EMLDIRPGEALAV FP+QLH ++ S+ + N D +LR+ RSLSPKV TLV+ E Sbjct: 384 PDVTREMLDIRPGEALAVNFPLQLHHTADESVHVSNPRDGLLRLVRSLSPKVTTLVEQES 443 Query: 933 SPNGKPFLARFAETLDFYAHIFYSFE-TMPRVYLNRVTIEQHYLGRKSVNIIACMRGRNG 1109 + N PF RF ETLD+Y IF S + T+PR R+ +EQH L R VNIIAC Sbjct: 444 NTNTTPFFNRFIETLDYYLAIFESIDVTLPRDSKERINVEQHCLARDIVNIIACEGKERV 503 Query: 1110 GAP*IVATWKYKFRNSDFQPSALSPVINKAVRN 1208 + WK + + + FQ LS +N +R+ Sbjct: 504 ERHELFGKWKSRLKMAGFQQCPLSSYVNSVIRS 536 >gb|AEE69131.1| GRAS family transcription factor [Citrus medica var. sarcodactylis] Length = 411 Score = 179 bits (455), Expect = 1e-42 Identities = 96/214 (44%), Positives = 133/214 (62%), Gaps = 7/214 (3%) Frame = +3 Query: 588 IVFRVLAERPGKTPHIRVTGVD------ASLDNSFAVGEWVTSLPRKCMLPIEFHPVPVF 749 I+ LA RPG PHIR+TG+D A D AVG + ++ +K + +EF+P+PVF Sbjct: 164 ILIMALASRPGGPPHIRITGIDDPVSKYARGDGLEAVGRRLAAISQKFNILVEFNPIPVF 223 Query: 750 AQDVTLEMLDIRPGEALAVMFPVQLHQNSERSIEIYNNSDKILRMARSLSPKVVTLVDLE 929 A DVTLEML +RPGEALAV FP+QLH + S+++ N D +LRM +SL+PKVVTLV+ E Sbjct: 224 APDVTLEMLGVRPGEALAVNFPLQLHHTPDESVDLNNPRDGLLRMIKSLNPKVVTLVEQE 283 Query: 930 FSPNGKPFLARFAETLDFYAHIFYSFE-TMPRVYLNRVTIEQHYLGRKSVNIIACMRGRN 1106 + N FL RF ETL++Y +F S + TMPR R+ +EQH L R VN+IAC Sbjct: 284 SNTNTAAFLPRFVETLNYYLAMFESIDVTMPRDQKERINVEQHCLARDIVNVIACEGRER 343 Query: 1107 GGAP*IVATWKYKFRNSDFQPSALSPVINKAVRN 1208 ++ W+ +F + F+ LS +N +RN Sbjct: 344 VERHELLGKWRSRFTMAGFRQCTLSSYVNSVIRN 377 >ref|XP_002317558.1| GRAS family transcription factor [Populus trichocarpa] gi|222860623|gb|EEE98170.1| GRAS family transcription factor [Populus trichocarpa] Length = 577 Score = 177 bits (450), Expect = 4e-42 Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 7/213 (3%) Frame = +3 Query: 591 VFRVLAERPGKTPHIRVTGVD------ASLDNSFAVGEWVTSLPRKCMLPIEFHPVPVFA 752 + + LA RPG PH+R+TG+D A D AV +T++ K +PIEFH VPV+A Sbjct: 331 LLQALAARPGGAPHVRITGIDDPVSKYARGDGLDAVARRLTAISEKFNIPIEFHGVPVYA 390 Query: 753 QDVTLEMLDIRPGEALAVMFPVQLHQNSERSIEIYNNSDKILRMARSLSPKVVTLVDLEF 932 DVT EM D+RPGEALAV FP++LH + S+++ N D +LRM +SL+PKVVTLV+ E Sbjct: 391 PDVTKEMFDVRPGEALAVNFPLELHHTPDESVDVNNPRDGLLRMIKSLNPKVVTLVEQES 450 Query: 933 SPNGKPFLARFAETLDFYAHIFYSFET-MPRVYLNRVTIEQHYLGRKSVNIIACMRGRNG 1109 + N PFL RF ETL++Y +F S + +PR R+++EQH L R VN+IAC Sbjct: 451 NTNTTPFLTRFVETLNYYLAMFESIDVRLPRNQKERISVEQHCLARDIVNVIACEGKERE 510 Query: 1110 GAP*IVATWKYKFRNSDFQPSALSPVINKAVRN 1208 + WK +F + F+ LS +N +R+ Sbjct: 511 ERHELFGKWKSRFMMAGFRQCPLSSYVNSVIRS 543 >dbj|BAI94488.1| GRAS family transcription factor [Dianthus caryophyllus] Length = 573 Score = 177 bits (449), Expect = 5e-42 Identities = 92/212 (43%), Positives = 129/212 (60%), Gaps = 7/212 (3%) Frame = +3 Query: 591 VFRVLAERPGKTPHIRVTGVDASLD------NSFAVGEWVTSLPRKCMLPIEFHPVPVFA 752 + + LA+RPG PH+R+TG+D + N VG + +L K +P+EFHPVPVF Sbjct: 327 LLQALAKRPGGAPHVRITGIDDPISKYARGTNLEPVGLRLKALSEKYQIPVEFHPVPVFG 386 Query: 753 QDVTLEMLDIRPGEALAVMFPVQLHQNSERSIEIYNNSDKILRMARSLSPKVVTLVDLEF 932 DVT EMLD+RPGEALAV FP+QLH + S+++ N D +LRM +SL+PKV TLV+ E Sbjct: 387 PDVTREMLDVRPGEALAVNFPLQLHHTPDESVDVNNPRDNLLRMVKSLNPKVTTLVEQES 446 Query: 933 SPNGKPFLARFAETLDFYAHIFYSFE-TMPRVYLNRVTIEQHYLGRKSVNIIACMRGRNG 1109 + N PFL RF ETL++Y+ +F S + TM R R+ +EQH L + VN+IAC Sbjct: 447 NTNTTPFLTRFIETLEYYSAMFESIDVTMARDRKERINVEQHCLAKDIVNVIACEGKERV 506 Query: 1110 GAP*IVATWKYKFRNSDFQPSALSPVINKAVR 1205 + WK + + F+ LS +N +R Sbjct: 507 ERHELFGKWKSRLTMAGFRQYPLSSYVNSVIR 538 >ref|XP_002282942.1| PREDICTED: chitin-inducible gibberellin-responsive protein 1-like [Vitis vinifera] Length = 583 Score = 177 bits (449), Expect = 5e-42 Identities = 94/215 (43%), Positives = 130/215 (60%), Gaps = 10/215 (4%) Frame = +3 Query: 591 VFRVLAERPGKTPHIRVTGVD---------ASLDNSFAVGEWVTSLPRKCMLPIEFHPVP 743 + + LA RP P +R+TG+D A LD AVG+ + ++ K +P+EFHPVP Sbjct: 337 LLQALAARPSGAPRVRITGIDDPVNKYARGAGLD---AVGKRLAAISEKFKIPVEFHPVP 393 Query: 744 VFAQDVTLEMLDIRPGEALAVMFPVQLHQNSERSIEIYNNSDKILRMARSLSPKVVTLVD 923 VFA D+T EMLD+RPGEALAV FP+QLH + S+++ N D++LRM +SLSPKV TLV+ Sbjct: 394 VFAPDITQEMLDVRPGEALAVNFPLQLHHTPDESVDVNNPRDELLRMVKSLSPKVTTLVE 453 Query: 924 LEFSPNGKPFLARFAETLDFYAHIFYSFE-TMPRVYLNRVTIEQHYLGRKSVNIIACMRG 1100 E + N PF RF ETLD+Y+ +F S + +PR R+ +EQH L R VNIIAC Sbjct: 454 QESNTNTTPFFTRFIETLDYYSAMFESIDVALPRERKERINVEQHCLARDIVNIIACEGK 513 Query: 1101 RNGGAP*IVATWKYKFRNSDFQPSALSPVINKAVR 1205 + WK + + F+ LS +N +R Sbjct: 514 ERVERHELFGKWKSRLTMAGFRQYPLSTYVNSVIR 548