BLASTX nr result

ID: Coptis24_contig00010204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010204
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274048.1| PREDICTED: transcription factor TCP14-like i...    89   3e-30
emb|CBI31976.3| unnamed protein product [Vitis vinifera]               85   7e-29
ref|XP_002268569.1| PREDICTED: transcription factor TCP15-like [...    70   2e-24
ref|XP_002522405.1| hypothetical protein RCOM_0835810 [Ricinus c...    67   5e-23
ref|XP_002511563.1| transcription factor, putative [Ricinus comm...    68   2e-21

>ref|XP_002274048.1| PREDICTED: transcription factor TCP14-like isoform 2 [Vitis
           vinifera]
          Length = 353

 Score = 89.4 bits (220), Expect(2) = 3e-30
 Identities = 50/106 (47%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
 Frame = +2

Query: 218 LRSTYFNPNFVTPQLRMRSEWERNIDESQRRILYPSVGFXXXXXXXXXXXXXXXXXXXXX 397
           LR++Y+NPNF     R R+EWERNIDES RRI+ P VG                      
Sbjct: 133 LRTSYYNPNFA----RNRTEWERNIDESLRRIVLPGVGLSSENSSSTLLNFSSSSVNAML 188

Query: 398 -AKQELRDQCLDMGDTDGSMGRKSRPEQDTSHLQHQMGNYMFQSAS 532
            AK ELR+ CLD+ D + ++GRK +PEQD SH   QMGNY+ QS S
Sbjct: 189 QAKPELRETCLDVSDAEATIGRKRQPEQDPSH--SQMGNYLLQSGS 232



 Score = 67.8 bits (164), Expect(2) = 3e-30
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = +1

Query: 1   KSDGETIEWLLQQAEPAVIAATGTGTIPANFT 96
           KSDGETIEWLLQQAEPAVIAATGTGTIPANFT
Sbjct: 83  KSDGETIEWLLQQAEPAVIAATGTGTIPANFT 114


>emb|CBI31976.3| unnamed protein product [Vitis vinifera]
          Length = 317

 Score = 84.7 bits (208), Expect(2) = 7e-29
 Identities = 48/105 (45%), Positives = 60/105 (57%)
 Frame = +2

Query: 218 LRSTYFNPNFVTPQLRMRSEWERNIDESQRRILYPSVGFXXXXXXXXXXXXXXXXXXXXX 397
           LR++Y+NPNF     R R+EWERNIDES RRI+ P                         
Sbjct: 133 LRTSYYNPNFA----RNRTEWERNIDESLRRIVLPG------------------------ 164

Query: 398 AKQELRDQCLDMGDTDGSMGRKSRPEQDTSHLQHQMGNYMFQSAS 532
           AK ELR+ CLD+ D + ++GRK +PEQD SH   QMGNY+ QS S
Sbjct: 165 AKPELRETCLDVSDAEATIGRKRQPEQDPSH--SQMGNYLLQSGS 207



 Score = 67.8 bits (164), Expect(2) = 7e-29
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = +1

Query: 1   KSDGETIEWLLQQAEPAVIAATGTGTIPANFT 96
           KSDGETIEWLLQQAEPAVIAATGTGTIPANFT
Sbjct: 83  KSDGETIEWLLQQAEPAVIAATGTGTIPANFT 114


>ref|XP_002268569.1| PREDICTED: transcription factor TCP15-like [Vitis vinifera]
          Length = 369

 Score = 70.1 bits (170), Expect(2) = 2e-24
 Identities = 45/106 (42%), Positives = 54/106 (50%)
 Frame = +2

Query: 215 QLRSTYFNPNFVTPQLRMRSEWERNIDESQRRILYPSVGFXXXXXXXXXXXXXXXXXXXX 394
           QLRSTYFNPNF  PQ               RR L+P  G                     
Sbjct: 150 QLRSTYFNPNFSVPQ---------------RRSLFP--GLSSENSSTLVNFQSNNLNSMF 192

Query: 395 XAKQELRDQCLDMGDTDGSMGRKSRPEQDTSHLQHQMGNYMFQSAS 532
            AKQELRD  LD+ +T+ S+GRK RPEQD S  Q QMG+Y+ QS++
Sbjct: 193 QAKQELRDTSLDLSETEESIGRKRRPEQDLS--QQQMGSYLLQSST 236



 Score = 67.8 bits (164), Expect(2) = 2e-24
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = +1

Query: 1   KSDGETIEWLLQQAEPAVIAATGTGTIPANFT 96
           KSDGETIEWLLQQAEPAVIAATGTGTIPANFT
Sbjct: 101 KSDGETIEWLLQQAEPAVIAATGTGTIPANFT 132


>ref|XP_002522405.1| hypothetical protein RCOM_0835810 [Ricinus communis]
           gi|223538290|gb|EEF39897.1| hypothetical protein
           RCOM_0835810 [Ricinus communis]
          Length = 420

 Score = 66.6 bits (161), Expect(2) = 5e-23
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +1

Query: 1   KSDGETIEWLLQQAEPAVIAATGTGTIPANFT 96
           KSDGETIEWLLQQAEP+VIAATGTGTIPANFT
Sbjct: 103 KSDGETIEWLLQQAEPSVIAATGTGTIPANFT 134



 Score = 66.2 bits (160), Expect(2) = 5e-23
 Identities = 53/135 (39%), Positives = 69/135 (51%), Gaps = 28/135 (20%)
 Frame = +2

Query: 218 LRSTYFNPNFVTPQ--LRMRSEWERNI------DESQRRILYP--SVGF----------- 334
           LR+TYFNPNFV+ Q  LR R++WER+I       + QRRIL+P  S+ F           
Sbjct: 153 LRNTYFNPNFVSHQQHLRNRTDWERSIIIDEATSQHQRRILFPDDSLSFSSISSSNNNAG 212

Query: 335 XXXXXXXXXXXXXXXXXXXXXAKQELRD--QCLDM--GDTDGSMGRKSRPEQD---TSHL 493
                                +KQE+RD   CL +  GD + S+GRK R E +    SH 
Sbjct: 213 GTLNTGAGVVLQGAATTSADVSKQEVRDTSTCLQVPHGDVETSIGRKRRSEHELLSQSH- 271

Query: 494 QHQMGNYMFQSASSG 538
            HQMG+Y+ QS SSG
Sbjct: 272 YHQMGSYLLQSTSSG 286


>ref|XP_002511563.1| transcription factor, putative [Ricinus communis]
           gi|223550678|gb|EEF52165.1| transcription factor,
           putative [Ricinus communis]
          Length = 401

 Score = 67.8 bits (164), Expect(2) = 2e-21
 Identities = 32/32 (100%), Positives = 32/32 (100%)
 Frame = +1

Query: 1   KSDGETIEWLLQQAEPAVIAATGTGTIPANFT 96
           KSDGETIEWLLQQAEPAVIAATGTGTIPANFT
Sbjct: 128 KSDGETIEWLLQQAEPAVIAATGTGTIPANFT 159



 Score = 59.7 bits (143), Expect(2) = 2e-21
 Identities = 40/108 (37%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
 Frame = +2

Query: 215 QLRSTYFNPNFVTPQLRMRSEWERNIDESQRRILYPSVGFXXXXXXXXXXXXXXXXXXXX 394
           QLRS  FNPNF                  QRR L+P +G                     
Sbjct: 177 QLRSASFNPNF---------------SMQQRRSLFPGIGLDTSPAPTFLNFQSSNLNAVL 221

Query: 395 XAKQELRD-QCLDMG-DTDGSMGRKSRPEQDTSHLQHQMGNYMFQSAS 532
            AKQELRD   L++  +T+ S+ RK R EQD S  QHQMG+Y+ QS++
Sbjct: 222 QAKQELRDTSSLELSTETEESLSRKRRSEQDLSSQQHQMGSYLLQSST 269


Top