BLASTX nr result

ID: Coptis24_contig00010202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010202
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284166.1| PREDICTED: uncharacterized protein LOC100262...   214   3e-53
ref|XP_002307383.1| predicted protein [Populus trichocarpa] gi|2...   203   4e-50
ref|XP_002513915.1| conserved hypothetical protein [Ricinus comm...   198   2e-48
ref|XP_002301050.1| predicted protein [Populus trichocarpa] gi|2...   190   5e-46
ref|XP_003615100.1| WW domain containing protein expressed [Medi...   145   2e-32

>ref|XP_002284166.1| PREDICTED: uncharacterized protein LOC100262645 [Vitis vinifera]
           gi|302141953|emb|CBI19156.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score =  214 bits (545), Expect = 3e-53
 Identities = 110/212 (51%), Positives = 137/212 (64%), Gaps = 2/212 (0%)
 Frame = +3

Query: 105 MVSVQESISSNQ-RNMIPEIENSGNKRKWEGGECFNLLSKISKAETTKSLFEIDFNVRCP 281
           MVS Q  +S +  R ++ E EN   KRKWE      +    SKA++TKS+F+I+  +   
Sbjct: 1   MVSFQTPLSPDPTRPIVSEFENLSKKRKWEKTGTEEVFKLQSKAKSTKSIFDIELQLE-- 58

Query: 282 APLPMDWKQCLDVESGQIHFYNTKTRKKSCRDPRESPERLRLAPMCLDLELNLPCDSLRR 461
            PLP++W++CLD++SGQIHFYNT+T K++ RDPR SPE     PM L+LELNLPCDSLRR
Sbjct: 59  TPLPLEWQRCLDIQSGQIHFYNTRTHKRTSRDPRASPEPPSPGPMSLELELNLPCDSLRR 118

Query: 462 QE-DDNWTKQNEPDSRLTMNSSTSPKKSDALTRCTSWTTFEEDHKEMVAAVCMRCNMLVM 638
              DDN  K N          S   K    +    SW  FE D++EMVAAVC RC+MLVM
Sbjct: 119 NRPDDNMGKWNSGSPSHNSKESLQKKNPGGVACSPSWLAFEGDNQEMVAAVCKRCHMLVM 178

Query: 639 LCKSSPACPNCKFMHPPEQSPIGPFTPRLSLL 734
           LCKSSP CPNCKFMHPP+Q+P   F  R SLL
Sbjct: 179 LCKSSPTCPNCKFMHPPDQTPPNLFKRRFSLL 210


>ref|XP_002307383.1| predicted protein [Populus trichocarpa] gi|222856832|gb|EEE94379.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  203 bits (517), Expect = 4e-50
 Identities = 109/208 (52%), Positives = 139/208 (66%), Gaps = 10/208 (4%)
 Frame = +3

Query: 105 MVSVQESISSNQRNMIPEIENSGNKRKWEGGECFNLLSKISKAETTKSLFEIDFNVRCPA 284
           MVS Q   S N R  IPE+++S  KRKWE  +   +L K SK E+TKS FE +  +    
Sbjct: 1   MVSFQALPSPNGRKSIPELDDSSKKRKWEESQTEGILEKRSKPESTKSFFE-EIELHRET 59

Query: 285 PLPMDWKQCLDVESGQIHFYNTKTRKKSCRDPRESPERLRLAP---MCLDLELNLPCDSL 455
           PLP++W++CLD++SGQIHFYNT+T K++ RDPR++PE    +P   M LDLELNLP D  
Sbjct: 60  PLPLEWQRCLDIQSGQIHFYNTRTHKRTSRDPRKTPEPP--SPDHHMSLDLELNLPYDQS 117

Query: 456 RRQE--DDNWTKQNEPDS-----RLTMNSSTSPKKSDALTRCTSWTTFEEDHKEMVAAVC 614
           +R+   +D+ TKQN   S      L  +SS   + S  LTR  SW   E D +EMVA VC
Sbjct: 118 QRKRFANDHITKQNSGGSIRGFGDLFKDSSRDKESSGGLTRRPSWLASERDQEEMVATVC 177

Query: 615 MRCNMLVMLCKSSPACPNCKFMHPPEQS 698
            RC+MLVMLC+SSPACPNCKFMHPP+QS
Sbjct: 178 TRCHMLVMLCRSSPACPNCKFMHPPDQS 205


>ref|XP_002513915.1| conserved hypothetical protein [Ricinus communis]
           gi|223547001|gb|EEF48498.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 216

 Score =  198 bits (503), Expect = 2e-48
 Identities = 108/218 (49%), Positives = 142/218 (65%), Gaps = 8/218 (3%)
 Frame = +3

Query: 105 MVSVQESISSNQRN--MIPEIENSGNKRKWEGGECFNLLSKISKA--ETTKSLFEIDFNV 272
           MVS+Q + +S  R   +I E++NS  KRKW+  + +    K SK   + TK +FEI+  +
Sbjct: 1   MVSLQAAATSPNRRETIISEVDNSSKKRKWDEPQTYGTFEKRSKPPNQNTKPIFEIELQL 60

Query: 273 RCPAPLPMDWKQCLDVESGQIHFYNTKTRKKSCRDPRESPERLRLAPMCLDLELNL-PCD 449
               PLP++W+QCLD++SG+IHFYNT+T+K++ RDPR SPE      M LDLEL+L PC+
Sbjct: 61  E--TPLPLEWQQCLDIQSGEIHFYNTRTKKRTSRDPRRSPEPPSPGHMSLDLELHLQPCE 118

Query: 450 SLRRQ--EDDNWTKQNEPDSRLTMNSSTSPKKSD-ALTRCTSWTTFEEDHKEMVAAVCMR 620
           S R+    D +     +    L M+SS   K S+  + RC SW   E D +EMVA VC R
Sbjct: 119 SQRKNNANDHSLASSIQGFGDLFMDSSKEDKSSEGTIKRCPSWIV-EGDQEEMVATVCTR 177

Query: 621 CNMLVMLCKSSPACPNCKFMHPPEQSPIGPFTPRLSLL 734
           C+MLVMLCKSSPACPNCKFMHPP+QSP   F  R SLL
Sbjct: 178 CHMLVMLCKSSPACPNCKFMHPPDQSPPKLFKQRFSLL 215


>ref|XP_002301050.1| predicted protein [Populus trichocarpa] gi|222842776|gb|EEE80323.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  190 bits (482), Expect = 5e-46
 Identities = 102/207 (49%), Positives = 133/207 (64%), Gaps = 8/207 (3%)
 Frame = +3

Query: 105 MVSVQESISSNQRNMIPEIENSGNKRKWEGGECFNLLSKISKAETTKSLFEIDFNVRCPA 284
           MVS Q   S N + +IP +++S  KRKWE  +   +L K S  E+ KS  EI+ ++    
Sbjct: 1   MVSFQALPSPNGKKLIPGLDDSSKKRKWEDPQTEGILEKRSNPESRKSFCEIELHLE--T 58

Query: 285 PLPMDWKQCLDVESGQIHFYNTKTRKKSCRDPRESPERLRLA-PMCLDLELNLPCDSLRR 461
           PLP++W++CLD++SGQIHFYNT+T K++ RDPR SPE       M L+LELNLP D  +R
Sbjct: 59  PLPLEWQRCLDIQSGQIHFYNTRTHKRTSRDPRGSPEPPSPDHDMSLELELNLPYDQSQR 118

Query: 462 QE--DDNWTKQNEPDS-----RLTMNSSTSPKKSDALTRCTSWTTFEEDHKEMVAAVCMR 620
           +    D+ TKQN   S      L   SS     S  LTR  SW  FE+D +EM+A VC +
Sbjct: 119 KSYTHDHITKQNPGGSIRGFGDLFKESSRDNGSSGGLTRRPSWLAFEKDQQEMLATVCTK 178

Query: 621 CNMLVMLCKSSPACPNCKFMHPPEQSP 701
           C+MLVMLC+SSP CPNCKF+HP EQSP
Sbjct: 179 CHMLVMLCRSSPTCPNCKFLHPLEQSP 205


>ref|XP_003615100.1| WW domain containing protein expressed [Medicago truncatula]
           gi|355516435|gb|AES98058.1| WW domain containing protein
           expressed [Medicago truncatula]
          Length = 213

 Score =  145 bits (365), Expect = 2e-32
 Identities = 87/210 (41%), Positives = 131/210 (62%), Gaps = 11/210 (5%)
 Frame = +3

Query: 105 MVSVQESIS-SNQRNMIPEIENSGNKRKWEGG-----ECF-NLLSKISKAETTKSLFEID 263
           MVS+ ++++ S ++    + +    KRKWE       E F +L   + K    KS+F+I+
Sbjct: 1   MVSLHKALAMSPKKESSTDFDGPQKKRKWEESPLSDQEFFKDLTHDLGKR---KSIFDIE 57

Query: 264 FNVRCPAPLPMD-WKQCLDVESGQIHFYNTKTRKKSCRDPRESP--ERLRLAPMCLDLEL 434
            +++   PLP D W+Q L V+SGQI   NTK   K+    RE P  E+  L  + LDLEL
Sbjct: 58  LHLK--TPLPSDKWQQYLTVQSGQIQLCNTKMNMKTQESKREYPLPEKSSLGHLSLDLEL 115

Query: 435 NLPCDSLRRQEDDNWTKQNEPDSRLTMNSSTSPKKSDALTRCTSWTTFEEDHKEMVAAVC 614
           NL C++L+++E+  + K+N       +N S S  K D+ +  +S ++  +D+KEM+A VC
Sbjct: 116 NLTCETLKKKEESYYEKKNN-----LVNESISKNKKDSSSWLSSSSSNGDDYKEMIATVC 170

Query: 615 MRCNMLVMLCKSSPACPNCKFMH-PPEQSP 701
           M+C+MLVMLCKSSP+CPNCKFMH PP+Q+P
Sbjct: 171 MKCHMLVMLCKSSPSCPNCKFMHPPPDQNP 200


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