BLASTX nr result

ID: Coptis24_contig00010196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010196
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323765.1| predicted protein [Populus trichocarpa] gi|2...   353   3e-95
ref|XP_002272202.2| PREDICTED: F-box/LRR-repeat protein 14 [Viti...   346   4e-93
emb|CBI36455.3| unnamed protein product [Vitis vinifera]              346   4e-93
ref|XP_004135871.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   340   2e-91
ref|XP_003546921.1| PREDICTED: F-box/LRR-repeat protein 14-like ...   340   2e-91

>ref|XP_002323765.1| predicted protein [Populus trichocarpa] gi|222866767|gb|EEF03898.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score =  353 bits (906), Expect = 3e-95
 Identities = 168/230 (73%), Positives = 203/230 (88%)
 Frame = +1

Query: 7   LSLVNCPISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSISVRVPSD 186
           LSLVNC ISP RGL+C+ G+CK+L K+HLDMC+GVRDCDI+ LA++SSNL+SIS+RVPSD
Sbjct: 240 LSLVNCIISPGRGLACMLGKCKNLEKIHLDMCVGVRDCDIIGLAKKSSNLRSISLRVPSD 299

Query: 187 YSLPLPRLINDSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGILALIELC 366
           +SLPL  L+N+ LRLTD+SL+A+A NCSMLESV ISFSDGEFP  +SFT NGIL LI++C
Sbjct: 300 FSLPL--LMNNPLRLTDESLKALAQNCSMLESVRISFSDGEFPSFSSFTQNGILNLIQMC 357

Query: 367 PVRILVLDRVYSFNDLGMEALCSAVFLETLELVRCQEITDEGLQLVTHFPRLCVLRLSKC 546
           P+R L LD VYSFND+GMEALCSA +LETLELVRCQEI+DEGLQLV  FPRLC+LRL KC
Sbjct: 358 PIRELALDHVYSFNDVGMEALCSAHYLETLELVRCQEISDEGLQLVGQFPRLCILRLKKC 417

Query: 547 LGLTDDGLRPLVESDKLEMLTVEDCPQVSERGIQGAAKFVSYKQDMSWLY 696
           LG+TDDGL PL  +DKL+ L VEDCPQ+SERG+QGAA+ VS++QD+SW+Y
Sbjct: 418 LGVTDDGLYPLAGTDKLDFLAVEDCPQISERGVQGAARSVSFRQDLSWMY 467


>ref|XP_002272202.2| PREDICTED: F-box/LRR-repeat protein 14 [Vitis vinifera]
          Length = 475

 Score =  346 bits (887), Expect = 4e-93
 Identities = 166/230 (72%), Positives = 203/230 (88%)
 Frame = +1

Query: 7   LSLVNCPISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSISVRVPSD 186
           LSLVNC ISP RGL+C+  +CK+L K+ LDMC+GVRDCDIV LA++SSNL+SIS+R PSD
Sbjct: 248 LSLVNCIISPGRGLACLLEKCKNLEKIRLDMCVGVRDCDIVGLAQKSSNLRSISLRGPSD 307

Query: 187 YSLPLPRLINDSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGILALIELC 366
           +SLPL  L+++ LRLTD+SL+A+A NCSMLES+ ISF+DGEFP  +SFTLNGIL +I++C
Sbjct: 308 FSLPL--LLSNPLRLTDESLKALAQNCSMLESIRISFTDGEFPSFSSFTLNGILTVIQMC 365

Query: 367 PVRILVLDRVYSFNDLGMEALCSAVFLETLELVRCQEITDEGLQLVTHFPRLCVLRLSKC 546
           P+R L LD VYSFND+GMEALCSA +LETLELVRCQEITDEGLQLV  FP LCVLRLSKC
Sbjct: 366 PIRKLSLDHVYSFNDVGMEALCSAPYLETLELVRCQEITDEGLQLVAQFPHLCVLRLSKC 425

Query: 547 LGLTDDGLRPLVESDKLEMLTVEDCPQVSERGIQGAAKFVSYKQDMSWLY 696
           LG+TDDG +PLV S KLE+L+VE+CPQ+SERG+QGAA+ VS+KQD+SW+Y
Sbjct: 426 LGVTDDGFKPLVGSYKLELLSVENCPQISERGVQGAARSVSFKQDLSWIY 475


>emb|CBI36455.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score =  346 bits (887), Expect = 4e-93
 Identities = 166/230 (72%), Positives = 203/230 (88%)
 Frame = +1

Query: 7   LSLVNCPISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSISVRVPSD 186
           LSLVNC ISP RGL+C+  +CK+L K+ LDMC+GVRDCDIV LA++SSNL+SIS+R PSD
Sbjct: 207 LSLVNCIISPGRGLACLLEKCKNLEKIRLDMCVGVRDCDIVGLAQKSSNLRSISLRGPSD 266

Query: 187 YSLPLPRLINDSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGILALIELC 366
           +SLPL  L+++ LRLTD+SL+A+A NCSMLES+ ISF+DGEFP  +SFTLNGIL +I++C
Sbjct: 267 FSLPL--LLSNPLRLTDESLKALAQNCSMLESIRISFTDGEFPSFSSFTLNGILTVIQMC 324

Query: 367 PVRILVLDRVYSFNDLGMEALCSAVFLETLELVRCQEITDEGLQLVTHFPRLCVLRLSKC 546
           P+R L LD VYSFND+GMEALCSA +LETLELVRCQEITDEGLQLV  FP LCVLRLSKC
Sbjct: 325 PIRKLSLDHVYSFNDVGMEALCSAPYLETLELVRCQEITDEGLQLVAQFPHLCVLRLSKC 384

Query: 547 LGLTDDGLRPLVESDKLEMLTVEDCPQVSERGIQGAAKFVSYKQDMSWLY 696
           LG+TDDG +PLV S KLE+L+VE+CPQ+SERG+QGAA+ VS+KQD+SW+Y
Sbjct: 385 LGVTDDGFKPLVGSYKLELLSVENCPQISERGVQGAARSVSFKQDLSWIY 434


>ref|XP_004135871.1| PREDICTED: F-box/LRR-repeat protein 14-like [Cucumis sativus]
           gi|449491060|ref|XP_004158787.1| PREDICTED:
           F-box/LRR-repeat protein 14-like [Cucumis sativus]
          Length = 481

 Score =  340 bits (873), Expect = 2e-91
 Identities = 163/230 (70%), Positives = 202/230 (87%)
 Frame = +1

Query: 7   LSLVNCPISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSISVRVPSD 186
           LSLVNC ISP RGL+CV G+CK+L K+HLDMC+GVRDCDI+SLAR S NL+SIS+RVPSD
Sbjct: 254 LSLVNCIISPGRGLACVLGKCKNLQKVHLDMCVGVRDCDIISLARESRNLRSISLRVPSD 313

Query: 187 YSLPLPRLINDSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGILALIELC 366
           +SLPL  L N++LRLTD+SL+A+A NCS LESV ISF+DGEFP L+SF+LNGIL L+ +C
Sbjct: 314 FSLPL--LANNTLRLTDESLKALAENCSHLESVRISFADGEFPSLSSFSLNGILVLVRMC 371

Query: 367 PVRILVLDRVYSFNDLGMEALCSAVFLETLELVRCQEITDEGLQLVTHFPRLCVLRLSKC 546
           PVR L LD VYSFND+G+EALCSA +LE+LELVRCQEI+D+GLQLV+ FP+L  LRLSKC
Sbjct: 372 PVRELALDHVYSFNDMGLEALCSASYLESLELVRCQEISDDGLQLVSQFPQLQNLRLSKC 431

Query: 547 LGLTDDGLRPLVESDKLEMLTVEDCPQVSERGIQGAAKFVSYKQDMSWLY 696
           LG+TDDGL+ LV++ KLE L VEDCPQ+SERG+ GAA+ +S++QD+SW+Y
Sbjct: 432 LGITDDGLKLLVDTYKLESLVVEDCPQISERGVHGAARAISFRQDLSWMY 481


>ref|XP_003546921.1| PREDICTED: F-box/LRR-repeat protein 14-like [Glycine max]
          Length = 492

 Score =  340 bits (872), Expect = 2e-91
 Identities = 164/230 (71%), Positives = 200/230 (86%)
 Frame = +1

Query: 7   LSLVNCPISPERGLSCVFGRCKSLMKLHLDMCIGVRDCDIVSLARRSSNLKSISVRVPSD 186
           LSLVNC ISP RGL+CV  +CK+L K+HLDMC+GVRD DI+ L++RSSNLKS+S+RVPSD
Sbjct: 265 LSLVNCIISPGRGLACVLRKCKNLQKIHLDMCVGVRDFDIICLSQRSSNLKSVSLRVPSD 324

Query: 187 YSLPLPRLINDSLRLTDQSLRAVAHNCSMLESVEISFSDGEFPCLTSFTLNGILALIELC 366
           +SLP   L+N+ LRLTD+SL+A+A NCS LESV ISFSDGEFP  +SFTL+GIL LI+ C
Sbjct: 325 FSLP--SLVNNPLRLTDESLKALAQNCSKLESVRISFSDGEFPSSSSFTLSGILCLIQRC 382

Query: 367 PVRILVLDRVYSFNDLGMEALCSAVFLETLELVRCQEITDEGLQLVTHFPRLCVLRLSKC 546
           PVR L LD VYSFND+GMEALCS  +LE+LELVRCQEI+DEGLQLV+ FPRLC+LRLSKC
Sbjct: 383 PVRQLALDHVYSFNDVGMEALCSLEYLESLELVRCQEISDEGLQLVSQFPRLCILRLSKC 442

Query: 547 LGLTDDGLRPLVESDKLEMLTVEDCPQVSERGIQGAAKFVSYKQDMSWLY 696
           LG++DDGL+PLV S KL+ L +EDCPQ+SERG+Q AAK VS++QD+SW+Y
Sbjct: 443 LGISDDGLKPLVGSLKLDFLAIEDCPQISERGVQRAAKSVSFRQDLSWMY 492


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