BLASTX nr result
ID: Coptis24_contig00010179
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010179
(2367 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis... 550 e-154
ref|XP_002520655.1| nucleic acid binding protein, putative [Rici... 495 e-137
ref|XP_002284051.1| PREDICTED: zinc finger protein MAGPIE [Vitis... 465 e-128
emb|CBI39492.3| unnamed protein product [Vitis vinifera] 452 e-124
gb|ADV56701.1| zinc finger protein [Phaseolus vulgaris] 435 e-119
>ref|XP_002269036.2| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]
Length = 570
Score = 550 bits (1417), Expect = e-154
Identities = 320/625 (51%), Positives = 388/625 (62%), Gaps = 20/625 (3%)
Frame = +2
Query: 323 TGDSRSFSSGHTGEEXXXXXXXXXXFI---------GEATRTNSNGSTS--------QQP 451
TGD SFSSG+TGEE +T TNSNGS+S QQ
Sbjct: 5 TGDDGSFSSGNTGEEVQQQQQQQQPQNHLHGSGLGPNSSTVTNSNGSSSSQQQQQQQQQQ 64
Query: 452 LLKKKRNLPGTPDPSAEVIALSPTTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKL 631
+KKKRNLPGTPDP+AEVIALSPTTLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 65 PIKKKRNLPGTPDPNAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 124
Query: 632 KQRTSAEIRKRVYICPETTCVHHNPARALGDLTGIKKHFCRKHGEKKWKXXXXXXXXXXX 811
+QRT+ EIRKRVYICPE +CVHHNPARALGDLTGIKKH+ RKHGEKKWK
Sbjct: 125 RQRTTNEIRKRVYICPEPSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKK---- 180
Query: 812 XXXXXXXXXHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHR 991
YAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHR
Sbjct: 181 -----------------------YAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHR 217
Query: 992 AFCDALAEENNKVSQGLLPSMGSNVQGQVSDHMSSMPINT-SNTAIGISEFNHNDLKNPT 1168
AFCDALAEENNKV+QGL+ +MGSN+Q Q+ + MSSMP+N+ S+ ++GISEFN D KNP
Sbjct: 218 AFCDALAEENNKVNQGLMANMGSNLQSQMPELMSSMPLNSNSSPSVGISEFNSYDPKNPL 277
Query: 1169 KSLSHDPMPMHLKXXXXXXXXXXXXXXXTLYNGQRSMSSTAACLQLSPNTSSSFDGIHDS 1348
KSL D +PM K TL+ G RS+SS+++ LQLS N+SS F+ + D
Sbjct: 278 KSLPQDLVPMPFK-SPNMSGGMFSSSSGTLFGGPRSISSSSSGLQLSSNSSSGFNYLQDG 336
Query: 1349 KTSLQITGSAHMSATALLQKAAQMGASASSNNINSPTMQKNFVPSMAGREQISNMRPSTF 1528
K Q++GSA+MSATALLQKAAQMGA+A SN+INSP MQK+FV SMA E +S++RPS +
Sbjct: 337 KNGTQLSGSANMSATALLQKAAQMGATA-SNSINSPMMQKSFVSSMAAPE-LSSIRPSPY 394
Query: 1529 GGMNSMQQSSNNCYDNMQSQTDQTQLGGVDGGGFMNQFFHNKSPQEMSS--QLIDTTVGV 1702
++QQ +N+ + QSQ DQ+ L G++GGG +QF K P E++ Q + + +
Sbjct: 395 ---VTIQQQTNSYDHHFQSQPDQSPLVGINGGGLPSQFL-QKGPPEITPLFQTVSGSASM 450
Query: 1703 DNDXXXXXXXXXXXXXXXXXXXXXPKNMEHEXXXXXXXXXXXXXXXXXXXXXIPASGRNP 1882
+ND KNME+E R+
Sbjct: 451 NNDIGMFGNVFIGGDQNSPFL----KNMENEDSSSTSSLAQGR----------TVMARSA 496
Query: 1883 TGPSRFSGNSNAGDVMTVDFLGVGGSRSASLXXXXXXXXXXXXXXXXXXXXGLEFEGVDQ 2062
TGPSRF GN DV T+D LGVGGSR +L LE E + Q
Sbjct: 497 TGPSRFGGNGEGKDVTTLDLLGVGGSRPVNLQEQQQR---------------LELEAMSQ 541
Query: 2063 HRMQGLHPYQQEVSHGQATMENPIW 2137
HRMQ + +QQ++SHG+ +E ++
Sbjct: 542 HRMQAMTTFQQQLSHGEPAIEQGLY 566
>ref|XP_002520655.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223540040|gb|EEF41617.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 631
Score = 495 bits (1274), Expect = e-137
Identities = 314/691 (45%), Positives = 379/691 (54%), Gaps = 85/691 (12%)
Frame = +2
Query: 323 TGDSRSFSSGHTGEEXXXXXXXXXX----FIGE------ATRTNSNGSTSQQPLLKKKRN 472
TG SFSSG+TGEE F G + TNSNGSTSQQ +KKKRN
Sbjct: 5 TGGEGSFSSGNTGEEVQQLQEKQQQLQNHFHGSNLSGPNSGATNSNGSTSQQTAVKKKRN 64
Query: 473 LPGTP-------------------------DPSAEVIALSPTTLMATNRFICEICNKGFQ 577
LPGTP DP+A+VIALSPTTLMATNRF+CEICNKGFQ
Sbjct: 65 LPGTPGNNNKTLETNEKGVLDCSKRYEFSRDPNADVIALSPTTLMATNRFVCEICNKGFQ 124
Query: 578 RDQNLQLHRRGHNLPWKLKQRTSAEIRKRVYICPETTCVHHNPARALGDLTGIKKHFCRK 757
RDQNLQLHRRGHNLPWKL+QRT+ E++KRVYICPE TCVHHNPARALGDLTGIKKHF RK
Sbjct: 125 RDQNLQLHRRGHNLPWKLRQRTTTEVKKRVYICPEPTCVHHNPARALGDLTGIKKHFSRK 184
Query: 758 HGEKKWKXXXXXXXXXXXXXXXXXXXXHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREY 937
HGEKKWK YAVQSDWKAH KTCGTREY
Sbjct: 185 HGEKKWKCDKCSKK---------------------------YAVQSDWKAHQKTCGTREY 217
Query: 938 KCDCGTIFSR----------------------------RDSFITHRAFCDALAEENNKVS 1033
KCDCGTIFSR RDSFITHRAFCDALAEENNKV+
Sbjct: 218 KCDCGTIFSRIYVPALVCNLALLSISLLTLLFNDQSCRRDSFITHRAFCDALAEENNKVN 277
Query: 1034 QGLLPSMGSNVQGQVSDHMSSMPINTS-NTAIGISEFNHNDLKNPTKSLSHDPMPMHLKX 1210
QGL GS++Q Q+ + MSSMP+ T+ NT+IGIS+FN D KNP KSL + +PM K
Sbjct: 278 QGLT---GSHLQNQMPELMSSMPLTTNTNTSIGISDFNSFDPKNPLKSLPQELVPMPFKS 334
Query: 1211 XXXXXXXXXXXXXXTLYNGQRSMSSTAACLQLSPNTSSSFDGIHDSKTSLQITGSAHMSA 1390
TL+ G RS++ST++ LQLS N+SS ++ + D K QI+ SA MSA
Sbjct: 335 MNMAGGMFSSSSG-TLFGGPRSIASTSSSLQLSSNSSSGYNYLQDGKNGCQISSSAQMSA 393
Query: 1391 TALLQKAAQMGASASSNNINSPTMQKNFVPSMAGREQISNMRPS-----TFGGMNSMQQS 1555
TALLQKAAQMGA+A SN+INSP MQK+F SMA +QI +RP +FGG+ Q +
Sbjct: 394 TALLQKAAQMGATA-SNSINSPMMQKSFASSMACPDQIIPIRPQLPRPPSFGGV--QQHN 450
Query: 1556 SNNCYDNMQSQ--TDQTQLGGVDGGGF-------------MNQFFHNKSPQEMSSQLIDT 1690
+ YD+ S DQT L G++GGG+ M+QFF S MS + +
Sbjct: 451 NTTSYDHFPSSQLLDQTHLVGINGGGYNQPNGTLQKGQQEMSQFFDPTSSSGMSDMGMLS 510
Query: 1691 TVGVDNDXXXXXXXXXXXXXXXXXXXXXPKNMEHEXXXXXXXXXXXXXXXXXXXXXIPAS 1870
T+ + D KN+EH +
Sbjct: 511 TMFMGTDQNPGFM----------------KNIEHSNNDHQDSGNTTSLIHGRAH----SM 550
Query: 1871 GRNPTGPSRFSG-NSNAGDVMTVDFLGVGGSRSASLXXXXXXXXXXXXXXXXXXXXGLEF 2047
R +GPSR G N + D+MT DF+G+GGSR A+L +E
Sbjct: 551 ERTASGPSRLVGHNGESSDMMTRDFMGIGGSRPANLHEQQQQQQQR-----------MEM 599
Query: 2048 EGVDQHRMQGLHPYQQEVSHGQATMENPIWE 2140
+ Q RM + +QQ++S G++ ME PIWE
Sbjct: 600 GAMSQQRMPMMSHFQQQLSLGESAMEKPIWE 630
>ref|XP_002284051.1| PREDICTED: zinc finger protein MAGPIE [Vitis vinifera]
Length = 531
Score = 465 bits (1196), Expect = e-128
Identities = 292/625 (46%), Positives = 344/625 (55%), Gaps = 20/625 (3%)
Frame = +2
Query: 326 GDSRSFSSGHTGEEXXXXXXXXXXF-----IGEATRTNSNGSTSQQ--PLLKKKRNLPGT 484
GD SFSSG G E + +T NSNGS SQQ P KKKRNLPG
Sbjct: 7 GDGGSFSSGTNGGEEVQQQPVNNLHGLSSSVPSSTSNNSNGSISQQQPPPAKKKRNLPGN 66
Query: 485 PDPSAEVIALSPTTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSAEIRKR 664
PDPSAEVIALSPTTLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL+QR+S EIRKR
Sbjct: 67 PDPSAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSTEIRKR 126
Query: 665 VYICPETTCVHHNPARALGDLTGIKKHFCRKHGEKKWKXXXXXXXXXXXXXXXXXXXXHG 844
VY+CPE +CVHHNPARALGDLTGIKKHFCRKHGEKKWK
Sbjct: 127 VYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKK--------------- 171
Query: 845 EXXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENN 1024
YAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEEN
Sbjct: 172 ------------YAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENT 219
Query: 1025 KVSQGLLPSMGSN--VQGQVSDHMSSMPINTS-NTAIGISEFNHNDLKNPTKSLSHDPMP 1195
KV+QGL +M N +QGQVS+ +SSMP+N + N+ +G+SEF H+D KN K+L H+PMP
Sbjct: 220 KVNQGLANTMRRNLQIQGQVSELLSSMPLNNNPNSTMGLSEFTHSDSKNHLKTLPHEPMP 279
Query: 1196 MHLKXXXXXXXXXXXXXXXTLYNGQRSMSSTAACLQLSPNTSSSFDGIHDSKTSLQITGS 1375
+ K +L+ + SS ++ +L +T+SS + + S
Sbjct: 280 VPPKPLNMAAAGMFSTTSGSLFGCPITASSPSSSSRLQLSTNSSSPSFENGQQLPPPPAS 339
Query: 1376 AHMSATALLQKAAQMGASASSNNINSPTMQKNFVPSMAGREQISNMRPSTFGGMNSMQQS 1555
MSATALLQKAAQMGA+AS+ NSP K FV SMA P+ FGG+ + S
Sbjct: 340 TLMSATALLQKAAQMGATASTKMNNSP--PKGFVTSMA---------PTPFGGILLQKNS 388
Query: 1556 SNNCYDNMQSQTDQTQLGGVDGGGFMNQFFHNKSPQE--------MSSQLIDTTVGVDND 1711
S+N + Q D TQ F+NQFF+ E M S L D G+
Sbjct: 389 SSN---DHHLQADPTQ--------FLNQFFYQNDGAESEVMSEMGMFSGLFDQNHGLF-- 435
Query: 1712 XXXXXXXXXXXXXXXXXXXXXPKNMEHEXXXXXXXXXXXXXXXXXXXXXIPASGRNPTGP 1891
KNMEH + A NP G
Sbjct: 436 ----------------------KNMEHH-------------EHSNSNNILAAKTTNP-GL 459
Query: 1892 SRFSGNSNAGDVMTVDFLGVGGSRSASLXXXXXXXXXXXXXXXXXXXXGLEFEG--VDQH 2065
S N D MTVDFLG+GG+R + FEG ++
Sbjct: 460 SSTPRNGKT-DTMTVDFLGIGGARPGNFHGQQQQQQEM-------------FEGMNINHP 505
Query: 2066 RMQGLHPYQQEVSHGQATMENPIWE 2140
RMQG ++Q ++HGQA ME +WE
Sbjct: 506 RMQGFSSFEQHIAHGQAAMEKTMWE 530
>emb|CBI39492.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 452 bits (1162), Expect = e-124
Identities = 292/625 (46%), Positives = 339/625 (54%), Gaps = 20/625 (3%)
Frame = +2
Query: 326 GDSRSFSSGHTGEEXXXXXXXXXXF-----IGEATRTNSNGSTSQQ--PLLKKKRNLPGT 484
GD SFSSG G E + +T NSNGS SQQ P KKKRNLPG
Sbjct: 7 GDGGSFSSGTNGGEEVQQQPVNNLHGLSSSVPSSTSNNSNGSISQQQPPPAKKKRNLPGN 66
Query: 485 PDPSAEVIALSPTTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSAEIRKR 664
PDPSAEVIALSPTTLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL+QR+S EIRKR
Sbjct: 67 PDPSAEVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSTEIRKR 126
Query: 665 VYICPETTCVHHNPARALGDLTGIKKHFCRKHGEKKWKXXXXXXXXXXXXXXXXXXXXHG 844
VY+CPE +CVHHNPARALGDLTGIKKHFCRKHGEKKWK
Sbjct: 127 VYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKK--------------- 171
Query: 845 EXXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENN 1024
YAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEEN
Sbjct: 172 ------------YAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENT 219
Query: 1025 KVSQGLLPSMGSN--VQGQVSDHMSSMPINTS-NTAIGISEFNHNDLKNPTKSLSHDPMP 1195
KV+QGL +M N +QGQVS+ +SSMP+N + N+ +G+SEF H+D KN K+L H+PMP
Sbjct: 220 KVNQGLANTMRRNLQIQGQVSELLSSMPLNNNPNSTMGLSEFTHSDSKNHLKTLPHEPMP 279
Query: 1196 MHLKXXXXXXXXXXXXXXXTLYNGQRSMSSTAACLQLSPNTSSSFDGIHDSKTSLQITGS 1375
+ K S+T+ L P T+S +G + S
Sbjct: 280 VPPKPLNMA--------------AAGMFSTTSGSLFGCPITASFENG----QQLPPPPAS 321
Query: 1376 AHMSATALLQKAAQMGASASSNNINSPTMQKNFVPSMAGREQISNMRPSTFGGMNSMQQS 1555
MSATALLQKAAQMGA+AS+ NSP K FV SMA P+ FGG+ + S
Sbjct: 322 TLMSATALLQKAAQMGATASTKMNNSP--PKGFVTSMA---------PTPFGGILLQKNS 370
Query: 1556 SNNCYDNMQSQTDQTQLGGVDGGGFMNQFFHNKSPQE--------MSSQLIDTTVGVDND 1711
S+N + Q D TQ F+NQFF+ E M S L D G+
Sbjct: 371 SSN---DHHLQADPTQ--------FLNQFFYQNDGAESEVMSEMGMFSGLFDQNHGLF-- 417
Query: 1712 XXXXXXXXXXXXXXXXXXXXXPKNMEHEXXXXXXXXXXXXXXXXXXXXXIPASGRNPTGP 1891
KNMEH + A NP G
Sbjct: 418 ----------------------KNMEHH-------------EHSNSNNILAAKTTNP-GL 441
Query: 1892 SRFSGNSNAGDVMTVDFLGVGGSRSASLXXXXXXXXXXXXXXXXXXXXGLEFEG--VDQH 2065
S N D MTVDFLG+GG+R + FEG ++
Sbjct: 442 SSTPRNGKT-DTMTVDFLGIGGARPGNFHGQQQQQQEM-------------FEGMNINHP 487
Query: 2066 RMQGLHPYQQEVSHGQATMENPIWE 2140
RMQG ++Q ++HGQA ME +WE
Sbjct: 488 RMQGFSSFEQHIAHGQAAMEKTMWE 512
>gb|ADV56701.1| zinc finger protein [Phaseolus vulgaris]
Length = 515
Score = 435 bits (1118), Expect = e-119
Identities = 270/565 (47%), Positives = 317/565 (56%), Gaps = 17/565 (3%)
Frame = +2
Query: 323 TGDSRSFSSGHTGEEXXXXXXXXXXFI-------GEATRTNSNGSTSQQPLLKKKRNLPG 481
+GD SFSSG+ GEE I G + NSN ST+QQ KKKRNLPG
Sbjct: 5 SGDEGSFSSGNNGEEVHQESQHQQPQIQLHDTSPGPSAACNSNASTNQQA--KKKRNLPG 62
Query: 482 TP-------DPSAEVIALSPTTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQR 640
TP +PSAEV+ALSPTTLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL+QR
Sbjct: 63 TPGKYSTKFNPSAEVVALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR 122
Query: 641 TSAEIRKRVYICPETTCVHHNPARALGDLTGIKKHFCRKHGEKKWKXXXXXXXXXXXXXX 820
TS E++KRVY+CPE +CVHHNPARALGDLTGIKKH+ RKHGEKKWK
Sbjct: 123 TSTEVKKRVYVCPEPSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKR------- 175
Query: 821 XXXXXXHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFC 1000
YAVQSDWKAH KTCGTREYKCDCGTIFSRRDSFITHRAFC
Sbjct: 176 --------------------YAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFC 215
Query: 1001 DALAEENNKVSQGLLPSMGSNVQGQVSDHMSSMPINTS-NTAIGISEFNHNDLKNPTKSL 1177
DAL EENN+V+QGL M N+Q Q+ D MS+MP+NTS NTA D KNP KSL
Sbjct: 216 DALTEENNRVNQGLTSGMPPNLQSQIPDLMSTMPLNTSPNTAY--------DPKNPLKSL 267
Query: 1178 SHDPMPMHLKXXXXXXXXXXXXXXXTLYNGQRSMSSTAACLQLSPNTSSSFDGIHDSKTS 1357
+ +P+ K L+ G ++M +++ LQL NTSSSF+ + D+K++
Sbjct: 268 PQELVPIPFK-SMSMGGGMFSTNAGALFGGPKTMPPSSSNLQLGSNTSSSFNYLQDNKSA 326
Query: 1358 LQITGSAHMSATALLQKAAQMGASASSNNINSPTMQKNFVPSMAGREQISNMRPSTFGGM 1537
I SA MSATALLQKAAQMG FV + +S+ RP G M
Sbjct: 327 GLIAASAQMSATALLQKAAQMG----------------FVTGTTAPDHVSSTRPPYSGAM 370
Query: 1538 NSMQQSSNNCYDNMQSQTDQTQLGGVDGGG-FMNQFFHNKSPQEMSSQLIDTTVGVDNDX 1714
NN Y++ Q D + + GV GGG F+NQ FH QE+ SQ+ DT N
Sbjct: 371 ----LQHNNSYEHFCPQPDLSNMAGVSGGGAFINQLFH--KGQEI-SQVFDTNTAGSN-- 421
Query: 1715 XXXXXXXXXXXXXXXXXXXXPKNMEHEXXXXXXXXXXXXXXXXXXXXXIPASGRNPTGPS 1894
KN+E E NP PS
Sbjct: 422 INDVGMFSQMPLGSDHNPGLMKNVEQEVSNCSSLIHGRDVVEG-----------NPMQPS 470
Query: 1895 RFSGNSNAGDVMTV-DFLGVGGSRS 1966
RF G+ D+ TV DFLG+GGS S
Sbjct: 471 RFGGS----DMTTVHDFLGIGGSTS 491