BLASTX nr result

ID: Coptis24_contig00010173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010173
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311473.1| predicted protein [Populus trichocarpa] gi|2...   202   4e-50
emb|CAN73490.1| hypothetical protein VITISV_040575 [Vitis vinifera]   201   6e-50
ref|XP_002282768.1| PREDICTED: probable inactive leucine-rich re...   201   8e-50
ref|XP_002526283.1| ATP binding protein, putative [Ricinus commu...   200   2e-49
ref|XP_002315920.1| predicted protein [Populus trichocarpa] gi|2...   199   4e-49

>ref|XP_002311473.1| predicted protein [Populus trichocarpa] gi|222851293|gb|EEE88840.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score =  202 bits (513), Expect = 4e-50
 Identities = 101/149 (67%), Positives = 116/149 (77%)
 Frame = -1

Query: 449 FGVLVMVLALFWLFFLLSCDQVVSLNDEGVVLLSFKQYMKEDPEGSLSNWNSSDETPCSW 270
           F + ++VL LF  + L     V SLN EG  LLSFKQ + EDPEGSLSNWNSSD+ PCSW
Sbjct: 2   FSLSLLVLVLFNSYSL-----VTSLNSEGYALLSFKQSINEDPEGSLSNWNSSDDNPCSW 56

Query: 269 NGITCKDEKVASLSIPKKKLVGVFPSVLGSLPALRHVNLRSNKLYGSLPVQAFNAQGLQS 90
           NG+TCKD KV SLSIPKKKL G  PS LGSL  LRH+NLR+N+ +G LP + F AQGLQS
Sbjct: 57  NGVTCKDLKVMSLSIPKKKLYGFLPSALGSLSDLRHINLRNNRFFGPLPAELFQAQGLQS 116

Query: 89  LVLYGNLFTGSLPSEIGNLKYLQTLDLSQ 3
           LVLYGN F+GSLP++IG LKYLQTLDLSQ
Sbjct: 117 LVLYGNSFSGSLPNQIGKLKYLQTLDLSQ 145


>emb|CAN73490.1| hypothetical protein VITISV_040575 [Vitis vinifera]
          Length = 713

 Score =  201 bits (512), Expect = 6e-50
 Identities = 101/140 (72%), Positives = 116/140 (82%), Gaps = 3/140 (2%)
 Frame = -1

Query: 413 LFFLLSCD---QVVSLNDEGVVLLSFKQYMKEDPEGSLSNWNSSDETPCSWNGITCKDEK 243
           L  LL C+   +V SLN+EGV LLSFK+ + EDPE SL NWNSSDE PCSWNGITCK+E+
Sbjct: 6   LLVLLLCNSHAKVGSLNEEGVALLSFKRSVGEDPERSLDNWNSSDENPCSWNGITCKEER 65

Query: 242 VASLSIPKKKLVGVFPSVLGSLPALRHVNLRSNKLYGSLPVQAFNAQGLQSLVLYGNLFT 63
           V S+SIPKKKL+G  PS LGSL  LRHVNLR+NK +GSLPV+ F AQGLQSLVLYGN  +
Sbjct: 66  VVSVSIPKKKLLGFLPSALGSLTQLRHVNLRNNKFFGSLPVELFKAQGLQSLVLYGNNLS 125

Query: 62  GSLPSEIGNLKYLQTLDLSQ 3
           GS+PSEIG+LKYLQTLDLSQ
Sbjct: 126 GSVPSEIGSLKYLQTLDLSQ 145


>ref|XP_002282768.1| PREDICTED: probable inactive leucine-rich repeat receptor-like
           protein kinase At1g66830 [Vitis vinifera]
           gi|297737773|emb|CBI26974.3| unnamed protein product
           [Vitis vinifera]
          Length = 713

 Score =  201 bits (511), Expect = 8e-50
 Identities = 101/140 (72%), Positives = 115/140 (82%), Gaps = 3/140 (2%)
 Frame = -1

Query: 413 LFFLLSCDQ---VVSLNDEGVVLLSFKQYMKEDPEGSLSNWNSSDETPCSWNGITCKDEK 243
           L  LL C+    V SLN+EGV LLSFK+ + EDPE SL NWNSSDE PCSWNGITCK+E+
Sbjct: 6   LLVLLLCNSHALVGSLNEEGVALLSFKRSVGEDPERSLDNWNSSDENPCSWNGITCKEER 65

Query: 242 VASLSIPKKKLVGVFPSVLGSLPALRHVNLRSNKLYGSLPVQAFNAQGLQSLVLYGNLFT 63
           V S+SIPKKKL+G  PS LGSL  LRHVNLR+NK +GSLPV+ F AQGLQSLVLYGN  +
Sbjct: 66  VVSVSIPKKKLLGFLPSALGSLTQLRHVNLRNNKFFGSLPVELFKAQGLQSLVLYGNNLS 125

Query: 62  GSLPSEIGNLKYLQTLDLSQ 3
           GS+PSEIG+LKYLQTLDLSQ
Sbjct: 126 GSVPSEIGSLKYLQTLDLSQ 145


>ref|XP_002526283.1| ATP binding protein, putative [Ricinus communis]
           gi|223534364|gb|EEF36072.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 715

 Score =  200 bits (508), Expect = 2e-49
 Identities = 102/149 (68%), Positives = 117/149 (78%)
 Frame = -1

Query: 449 FGVLVMVLALFWLFFLLSCDQVVSLNDEGVVLLSFKQYMKEDPEGSLSNWNSSDETPCSW 270
           F + V+VL LF      + + V+SLN EG  LLSFKQ + +DPEGSLSNWNSSDETPCSW
Sbjct: 2   FFLTVLVLLLF------NSNGVISLNSEGFALLSFKQSIYQDPEGSLSNWNSSDETPCSW 55

Query: 269 NGITCKDEKVASLSIPKKKLVGVFPSVLGSLPALRHVNLRSNKLYGSLPVQAFNAQGLQS 90
           NG+TCK+ KV S+SIPKKKL G  PS LGSL  LRHVNLR+N  +GSLP Q F AQGLQS
Sbjct: 56  NGVTCKELKVVSVSIPKKKLFGFLPSSLGSLSDLRHVNLRNNMFFGSLPSQLFQAQGLQS 115

Query: 89  LVLYGNLFTGSLPSEIGNLKYLQTLDLSQ 3
           LVLYGN  +GSLP++IG LKYLQTLDLSQ
Sbjct: 116 LVLYGNSLSGSLPNDIGKLKYLQTLDLSQ 144


>ref|XP_002315920.1| predicted protein [Populus trichocarpa] gi|222864960|gb|EEF02091.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score =  199 bits (505), Expect = 4e-49
 Identities = 99/149 (66%), Positives = 117/149 (78%)
 Frame = -1

Query: 449 FGVLVMVLALFWLFFLLSCDQVVSLNDEGVVLLSFKQYMKEDPEGSLSNWNSSDETPCSW 270
           F +++++LALF    L+SC     LN+EG  LLSFKQ + EDPEGSLSNWNSSD+ PCSW
Sbjct: 2   FSLILLLLALFNCHSLVSC-----LNNEGYALLSFKQSIYEDPEGSLSNWNSSDDNPCSW 56

Query: 269 NGITCKDEKVASLSIPKKKLVGVFPSVLGSLPALRHVNLRSNKLYGSLPVQAFNAQGLQS 90
           NG+TCKD KV S+SIPKK+L G  PS LGSL  LRHVNLR+N+  GSLP + F AQGLQS
Sbjct: 57  NGVTCKDFKVMSVSIPKKRLYGFLPSALGSLSDLRHVNLRNNRFSGSLPAELFQAQGLQS 116

Query: 89  LVLYGNLFTGSLPSEIGNLKYLQTLDLSQ 3
           LVLYGN  +GSLP++ G LKYLQTLDLSQ
Sbjct: 117 LVLYGNSLSGSLPNQFGKLKYLQTLDLSQ 145


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