BLASTX nr result

ID: Coptis24_contig00010171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010171
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298467.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002526044.1| Rho GTPase activator, putative [Ricinus comm...    72   5e-11
ref|XP_002276277.2| PREDICTED: uncharacterized protein LOC100246...    72   6e-11
emb|CBI24251.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002314002.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10

>ref|XP_002298467.1| predicted protein [Populus trichocarpa] gi|222845725|gb|EEE83272.1|
           predicted protein [Populus trichocarpa]
          Length = 876

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/87 (48%), Positives = 49/87 (56%)
 Frame = -2

Query: 261 DDFDPNGDTSAQLLXXXXXXXXXXAIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXX 82
           DDFD NGD SAQLL          AIITTLLEEYEN+F D  +H  S S DSQ+      
Sbjct: 336 DDFDVNGDNSAQLLAAANAANNAQAIITTLLEEYENIFDDENLHRCSISADSQIENSASD 395

Query: 81  XXXXXXNLKTKNITYHDAANEVNPEVD 1
                 N+  K+  YHDA NEV+ + D
Sbjct: 396 DSSDDENMDMKDNGYHDAENEVDQDTD 422


>ref|XP_002526044.1| Rho GTPase activator, putative [Ricinus communis]
           gi|223534625|gb|EEF36321.1| Rho GTPase activator,
           putative [Ricinus communis]
          Length = 821

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/87 (48%), Positives = 50/87 (57%)
 Frame = -2

Query: 261 DDFDPNGDTSAQLLXXXXXXXXXXAIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXX 82
           DDFD NGD+SAQLL          AIITTLLEEYEN+F D  +H  S S DS++      
Sbjct: 280 DDFDFNGDSSAQLLAAANAANNAQAIITTLLEEYENIFDDENLHRCSISADSRIENSGSD 339

Query: 81  XXXXXXNLKTKNITYHDAANEVNPEVD 1
                 N+  K+  YHDA NEV+ E D
Sbjct: 340 YSSDDENMDIKDNGYHDAENEVDQETD 366


>ref|XP_002276277.2| PREDICTED: uncharacterized protein LOC100246624 [Vitis vinifera]
          Length = 884

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/87 (45%), Positives = 51/87 (58%)
 Frame = -2

Query: 261 DDFDPNGDTSAQLLXXXXXXXXXXAIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXX 82
           DDFD NGD+SAQLL          AIITTLLEEYEN+F D  +H  S S DS++      
Sbjct: 333 DDFDMNGDSSAQLLAAANAANNAQAIITTLLEEYENIFDDDNLHRCSISADSRIENSGSE 392

Query: 81  XXXXXXNLKTKNITYHDAANEVNPEVD 1
                 N+  ++  YHDA NEV+P+ +
Sbjct: 393 DSTDDENIDMRDNGYHDAENEVDPDTE 419


>emb|CBI24251.3| unnamed protein product [Vitis vinifera]
          Length = 886

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/87 (45%), Positives = 51/87 (58%)
 Frame = -2

Query: 261 DDFDPNGDTSAQLLXXXXXXXXXXAIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXX 82
           DDFD NGD+SAQLL          AIITTLLEEYEN+F D  +H  S S DS++      
Sbjct: 335 DDFDMNGDSSAQLLAAANAANNAQAIITTLLEEYENIFDDDNLHRCSISADSRIENSGSE 394

Query: 81  XXXXXXNLKTKNITYHDAANEVNPEVD 1
                 N+  ++  YHDA NEV+P+ +
Sbjct: 395 DSTDDENIDMRDNGYHDAENEVDPDTE 421


>ref|XP_002314002.1| predicted protein [Populus trichocarpa] gi|222850410|gb|EEE87957.1|
           predicted protein [Populus trichocarpa]
          Length = 872

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 41/87 (47%), Positives = 48/87 (55%)
 Frame = -2

Query: 261 DDFDPNGDTSAQLLXXXXXXXXXXAIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXX 82
           DDFD NGD SAQLL          AIITTLLEEYEN+F D  +H  S S DS++      
Sbjct: 332 DDFDFNGDNSAQLLAAANAANNAQAIITTLLEEYENIFDDENLHRCSISADSRIENSGSD 391

Query: 81  XXXXXXNLKTKNITYHDAANEVNPEVD 1
                 N+  K   YHDA NEV+ + D
Sbjct: 392 DSTDDENMDMKENGYHDAENEVDQDSD 418


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