BLASTX nr result
ID: Coptis24_contig00010171
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010171 (262 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298467.1| predicted protein [Populus trichocarpa] gi|2... 73 3e-11 ref|XP_002526044.1| Rho GTPase activator, putative [Ricinus comm... 72 5e-11 ref|XP_002276277.2| PREDICTED: uncharacterized protein LOC100246... 72 6e-11 emb|CBI24251.3| unnamed protein product [Vitis vinifera] 72 6e-11 ref|XP_002314002.1| predicted protein [Populus trichocarpa] gi|2... 69 3e-10 >ref|XP_002298467.1| predicted protein [Populus trichocarpa] gi|222845725|gb|EEE83272.1| predicted protein [Populus trichocarpa] Length = 876 Score = 72.8 bits (177), Expect = 3e-11 Identities = 42/87 (48%), Positives = 49/87 (56%) Frame = -2 Query: 261 DDFDPNGDTSAQLLXXXXXXXXXXAIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXX 82 DDFD NGD SAQLL AIITTLLEEYEN+F D +H S S DSQ+ Sbjct: 336 DDFDVNGDNSAQLLAAANAANNAQAIITTLLEEYENIFDDENLHRCSISADSQIENSASD 395 Query: 81 XXXXXXNLKTKNITYHDAANEVNPEVD 1 N+ K+ YHDA NEV+ + D Sbjct: 396 DSSDDENMDMKDNGYHDAENEVDQDTD 422 >ref|XP_002526044.1| Rho GTPase activator, putative [Ricinus communis] gi|223534625|gb|EEF36321.1| Rho GTPase activator, putative [Ricinus communis] Length = 821 Score = 72.0 bits (175), Expect = 5e-11 Identities = 42/87 (48%), Positives = 50/87 (57%) Frame = -2 Query: 261 DDFDPNGDTSAQLLXXXXXXXXXXAIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXX 82 DDFD NGD+SAQLL AIITTLLEEYEN+F D +H S S DS++ Sbjct: 280 DDFDFNGDSSAQLLAAANAANNAQAIITTLLEEYENIFDDENLHRCSISADSRIENSGSD 339 Query: 81 XXXXXXNLKTKNITYHDAANEVNPEVD 1 N+ K+ YHDA NEV+ E D Sbjct: 340 YSSDDENMDIKDNGYHDAENEVDQETD 366 >ref|XP_002276277.2| PREDICTED: uncharacterized protein LOC100246624 [Vitis vinifera] Length = 884 Score = 71.6 bits (174), Expect = 6e-11 Identities = 40/87 (45%), Positives = 51/87 (58%) Frame = -2 Query: 261 DDFDPNGDTSAQLLXXXXXXXXXXAIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXX 82 DDFD NGD+SAQLL AIITTLLEEYEN+F D +H S S DS++ Sbjct: 333 DDFDMNGDSSAQLLAAANAANNAQAIITTLLEEYENIFDDDNLHRCSISADSRIENSGSE 392 Query: 81 XXXXXXNLKTKNITYHDAANEVNPEVD 1 N+ ++ YHDA NEV+P+ + Sbjct: 393 DSTDDENIDMRDNGYHDAENEVDPDTE 419 >emb|CBI24251.3| unnamed protein product [Vitis vinifera] Length = 886 Score = 71.6 bits (174), Expect = 6e-11 Identities = 40/87 (45%), Positives = 51/87 (58%) Frame = -2 Query: 261 DDFDPNGDTSAQLLXXXXXXXXXXAIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXX 82 DDFD NGD+SAQLL AIITTLLEEYEN+F D +H S S DS++ Sbjct: 335 DDFDMNGDSSAQLLAAANAANNAQAIITTLLEEYENIFDDDNLHRCSISADSRIENSGSE 394 Query: 81 XXXXXXNLKTKNITYHDAANEVNPEVD 1 N+ ++ YHDA NEV+P+ + Sbjct: 395 DSTDDENIDMRDNGYHDAENEVDPDTE 421 >ref|XP_002314002.1| predicted protein [Populus trichocarpa] gi|222850410|gb|EEE87957.1| predicted protein [Populus trichocarpa] Length = 872 Score = 69.3 bits (168), Expect = 3e-10 Identities = 41/87 (47%), Positives = 48/87 (55%) Frame = -2 Query: 261 DDFDPNGDTSAQLLXXXXXXXXXXAIITTLLEEYENVFRDVIVHGSSFSVDSQMXXXXXX 82 DDFD NGD SAQLL AIITTLLEEYEN+F D +H S S DS++ Sbjct: 332 DDFDFNGDNSAQLLAAANAANNAQAIITTLLEEYENIFDDENLHRCSISADSRIENSGSD 391 Query: 81 XXXXXXNLKTKNITYHDAANEVNPEVD 1 N+ K YHDA NEV+ + D Sbjct: 392 DSTDDENMDMKENGYHDAENEVDQDSD 418