BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010168
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268037.2| PREDICTED: clp protease-related protein At4g...   141   6e-32
emb|CAN60931.1| hypothetical protein VITISV_006813 [Vitis vinifera]   141   6e-32
ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g...   135   3e-30
ref|NP_001242487.1| uncharacterized protein LOC100786582 [Glycin...   129   2e-28
ref|XP_003534040.1| PREDICTED: clp protease-related protein At4g...   128   4e-28

>ref|XP_002268037.2| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Vitis vinifera]
           gi|296084123|emb|CBI24511.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score =  141 bits (355), Expect = 6e-32
 Identities = 83/140 (59%), Positives = 101/140 (72%)
 Frame = +1

Query: 49  MACHSLSTLTISNASSNSCNNEKVGKALSLSCNKPDWLVNSLFGNQLSLHLTLNSRPLIQ 228
           M+ HSLS L IS       N       L LS +K + L +SL G +LS+  + +SR ++ 
Sbjct: 1   MSTHSLSLLPISCHR----NPNDPASPLLLSLHK-NGLFSSLIGQKLSIQSS-HSRLVVS 54

Query: 229 KKRCAAFATISFSLPTAKPEKVSSEKAPKWSARAIKSFAMGELEARKLKYPSTGTEAILM 408
            +  +  AT+  SLPTAKPE+ SSEK PKWSARAIKSF+M ELEARKLKYP+TGTEA+LM
Sbjct: 55  TRYRSTVATVLLSLPTAKPERTSSEKVPKWSARAIKSFSMAELEARKLKYPNTGTEALLM 114

Query: 409 GILVEGTSLASKFLRANGIT 468
           GILVEGTSLA+KFLRANGIT
Sbjct: 115 GILVEGTSLAAKFLRANGIT 134


>emb|CAN60931.1| hypothetical protein VITISV_006813 [Vitis vinifera]
          Length = 231

 Score =  141 bits (355), Expect = 6e-32
 Identities = 83/140 (59%), Positives = 101/140 (72%)
 Frame = +1

Query: 49  MACHSLSTLTISNASSNSCNNEKVGKALSLSCNKPDWLVNSLFGNQLSLHLTLNSRPLIQ 228
           M+ HSLS L IS       N       L LS +K + L +SL G +LS+  + +SR ++ 
Sbjct: 1   MSTHSLSLLPISCHR----NPNDPASPLLLSLHK-NGLXSSLIGQKLSIQSS-HSRLVVS 54

Query: 229 KKRCAAFATISFSLPTAKPEKVSSEKAPKWSARAIKSFAMGELEARKLKYPSTGTEAILM 408
            +  +  AT+  SLPTAKPE+ SSEK PKWSARAIKSF+M ELEARKLKYP+TGTEA+LM
Sbjct: 55  TRYRSTVATVLLSLPTAKPERTSSEKVPKWSARAIKSFSMAELEARKLKYPNTGTEALLM 114

Query: 409 GILVEGTSLASKFLRANGIT 468
           GILVEGTSLA+KFLRANGIT
Sbjct: 115 GILVEGTSLAAKFLRANGIT 134


>ref|XP_004148125.1| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Cucumis sativus]
           gi|449499662|ref|XP_004160878.1| PREDICTED: clp
           protease-related protein At4g12060, chloroplastic-like
           [Cucumis sativus]
          Length = 234

 Score =  135 bits (340), Expect = 3e-30
 Identities = 75/136 (55%), Positives = 96/136 (70%)
 Frame = +1

Query: 61  SLSTLTISNASSNSCNNEKVGKALSLSCNKPDWLVNSLFGNQLSLHLTLNSRPLIQKKRC 240
           S S L +S  S ++C+        SL    P + ++ L   +L++  +  + P+++  R 
Sbjct: 10  SFSPLPLSLPSQSNCH--------SLEHKPPLFPLSPLIQLKLAIKRSNATHPVLKFSRR 61

Query: 241 AAFATISFSLPTAKPEKVSSEKAPKWSARAIKSFAMGELEARKLKYPSTGTEAILMGILV 420
           A  AT+SFSLP +KPE V  EK PKWSARAIKSFAMGELEARKLKYP+TGTEA+LMGIL+
Sbjct: 62  ATTATVSFSLPASKPEGVPPEKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGILI 121

Query: 421 EGTSLASKFLRANGIT 468
           EGTS A+KFLRANGIT
Sbjct: 122 EGTSTAAKFLRANGIT 137


>ref|NP_001242487.1| uncharacterized protein LOC100786582 [Glycine max]
           gi|255639105|gb|ACU19852.1| unknown [Glycine max]
          Length = 260

 Score =  129 bits (325), Expect = 2e-28
 Identities = 70/101 (69%), Positives = 80/101 (79%), Gaps = 1/101 (0%)
 Frame = +1

Query: 169 SLFGNQLSL-HLTLNSRPLIQKKRCAAFATISFSLPTAKPEKVSSEKAPKWSARAIKSFA 345
           SLFG +++L   T +SR L      A  AT+SFSLPT KP   + EK PKWSARAIKS+A
Sbjct: 59  SLFGTRITLLRATSSSRSLPNTNCRATSATVSFSLPTPKPLSDTPEKTPKWSARAIKSYA 118

Query: 346 MGELEARKLKYPSTGTEAILMGILVEGTSLASKFLRANGIT 468
           MGELEARKLKYP+TGTEA+LMGILVEGTS A+KFLRANGIT
Sbjct: 119 MGELEARKLKYPNTGTEALLMGILVEGTSKAAKFLRANGIT 159


>ref|XP_003534040.1| PREDICTED: clp protease-related protein At4g12060,
           chloroplastic-like [Glycine max]
          Length = 252

 Score =  128 bits (322), Expect = 4e-28
 Identities = 76/137 (55%), Positives = 92/137 (67%), Gaps = 1/137 (0%)
 Frame = +1

Query: 61  SLSTLTISNASSNSCNNEKVGKALSLSCNKPDWLVNSLFGNQLSL-HLTLNSRPLIQKKR 237
           S+ TL++SN +++              C  P     SLFG +++L   T +SR L     
Sbjct: 32  SIPTLSLSNPNNH--------------CTLPP---TSLFGTRITLLRATSSSRSLPNTNC 74

Query: 238 CAAFATISFSLPTAKPEKVSSEKAPKWSARAIKSFAMGELEARKLKYPSTGTEAILMGIL 417
            A  AT+SFSLPT KP   + EK PKWSARAIKS+AMGELEARKLKYP+TGTEA+LMGIL
Sbjct: 75  RATSATVSFSLPTPKPLSDTPEKTPKWSARAIKSYAMGELEARKLKYPNTGTEALLMGIL 134

Query: 418 VEGTSLASKFLRANGIT 468
           VEGTS A+KF RANGIT
Sbjct: 135 VEGTSKAAKFSRANGIT 151