BLASTX nr result

ID: Coptis24_contig00010164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010164
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272614.1| PREDICTED: auxin-induced protein 6B-like [Vi...   100   9e-20
emb|CAN76261.1| hypothetical protein VITISV_018522 [Vitis vinifera]    99   5e-19
ref|XP_002329465.1| SAUR family protein [Populus trichocarpa] gi...    98   6e-19
ref|XP_002300214.1| SAUR family protein [Populus trichocarpa] gi...    97   1e-18
ref|NP_001048241.1| Os02g0769100 [Oryza sativa Japonica Group] g...    87   2e-15

>ref|XP_002272614.1| PREDICTED: auxin-induced protein 6B-like [Vitis vinifera]
          Length = 103

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/80 (58%), Positives = 65/80 (81%)
 Frame = -2

Query: 398 EKKKTNRVRKGWIAVRVGLEKEEGGFQTFSIPISDLCHPLYGDLLEKSQEMYGSNKEGLL 219
           +++K  +V+KGW+AV VGLE+E+GGFQ F IPIS L HPL+  LLEK+QE+YG +  G L
Sbjct: 2   QEEKKMKVKKGWLAVEVGLEEEDGGFQRFVIPISYLYHPLFKRLLEKAQEVYGFHTAGPL 61

Query: 218 RLPCSVEEFENLRLRVEQES 159
           RLPCSV++F +LR R+E+E+
Sbjct: 62  RLPCSVDDFLHLRWRIEREN 81


>emb|CAN76261.1| hypothetical protein VITISV_018522 [Vitis vinifera]
          Length = 97

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/74 (62%), Positives = 61/74 (82%)
 Frame = -2

Query: 380 RVRKGWIAVRVGLEKEEGGFQTFSIPISDLCHPLYGDLLEKSQEMYGSNKEGLLRLPCSV 201
           +V+KGW+AV VGLE+E+GGFQ F IPIS L HPL+  LLEK+QE+YG +  G LRLPCSV
Sbjct: 2   KVKKGWLAVEVGLEEEDGGFQRFVIPISYLYHPLFKRLLEKAQEVYGFHTAGPLRLPCSV 61

Query: 200 EEFENLRLRVEQES 159
           ++F +LR R+E+E+
Sbjct: 62  DDFLHLRWRIEREN 75


>ref|XP_002329465.1| SAUR family protein [Populus trichocarpa]
           gi|222870145|gb|EEF07276.1| SAUR family protein [Populus
           trichocarpa]
          Length = 105

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/84 (59%), Positives = 64/84 (76%)
 Frame = -2

Query: 410 NGSPEKKKTNRVRKGWIAVRVGLEKEEGGFQTFSIPISDLCHPLYGDLLEKSQEMYGSNK 231
           N   +KKK   V+KGW+AVRVGLE+E+GGFQ F IPIS L HPL+  LLEK+ E+YG + 
Sbjct: 3   NTQEDKKK---VKKGWLAVRVGLEEEDGGFQRFVIPISYLYHPLFKRLLEKAHEVYGYHT 59

Query: 230 EGLLRLPCSVEEFENLRLRVEQES 159
            G L LPCSV++F +LR R+E+ES
Sbjct: 60  TGPLWLPCSVDDFLHLRWRIERES 83


>ref|XP_002300214.1| SAUR family protein [Populus trichocarpa]
           gi|222847472|gb|EEE85019.1| SAUR family protein [Populus
           trichocarpa]
          Length = 106

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/80 (57%), Positives = 63/80 (78%)
 Frame = -2

Query: 398 EKKKTNRVRKGWIAVRVGLEKEEGGFQTFSIPISDLCHPLYGDLLEKSQEMYGSNKEGLL 219
           ++ K ++V+KGW+AVRVGLE E+ GFQ F IPIS L HPL+  LLEK+ E+YG +  G L
Sbjct: 5   QEDKKSKVKKGWLAVRVGLEDEDCGFQRFVIPISYLYHPLFKRLLEKAHEVYGYHTTGPL 64

Query: 218 RLPCSVEEFENLRLRVEQES 159
           R+PCSV++F +LR R+E+ES
Sbjct: 65  RVPCSVDDFLHLRWRIEKES 84


>ref|NP_001048241.1| Os02g0769100 [Oryza sativa Japonica Group]
           gi|46805402|dbj|BAD16904.1| unknown protein [Oryza
           sativa Japonica Group] gi|46805457|dbj|BAD16939.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113537772|dbj|BAF10155.1| Os02g0769100 [Oryza sativa
           Japonica Group] gi|215766008|dbj|BAG98236.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 128

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 4/84 (4%)
 Frame = -2

Query: 398 EKKKTNRVRKGWIAVRVGLEKEEGG----FQTFSIPISDLCHPLYGDLLEKSQEMYGSNK 231
           E+KK  +V+KGW+AVRVG+E  +GG    F+ F IPI+ L HPL+  LLE +++ YG + 
Sbjct: 5   EEKKAGKVKKGWLAVRVGVEGADGGDGGGFRRFVIPIAYLYHPLFRRLLEAARDAYGYDS 64

Query: 230 EGLLRLPCSVEEFENLRLRVEQES 159
            G LRLPCSV+EF  LR  VE+E+
Sbjct: 65  AGPLRLPCSVDEFLRLRSLVERET 88


Top