BLASTX nr result

ID: Coptis24_contig00010163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010163
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
 Frame = -3

Query: 423 FGIQFGVELQIWVMKQYGVNGSWTKQF--KIGLLGVCGSLEYLRPVGIANSGEIILIQSS 250
           F    G    IWVMKQYGV  SWTK+F  K     +    +  RP+ + ++GEI++   S
Sbjct: 291 FDYPLGDSFDIWVMKQYGVQESWTKEFILKNPSTDIIWYWDLYRPISLLSNGEILMSHKS 350

Query: 249 VSSTKKIVFYNAETDSVRDVKIFDSGHWKVFAYTGSLISPKFI 121
               K +V YN E  S R +KI+   +++   Y  S +SP+ I
Sbjct: 351 ----KAMVSYNPEDRSFRFLKIYGIQNFEANPYVPSFLSPREI 389


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