BLASTX nr result

ID: Coptis24_contig00010162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010162
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633468.1| PREDICTED: probable signal peptidase complex...   130   4e-28
ref|XP_003633467.1| PREDICTED: probable signal peptidase complex...   130   4e-28
ref|XP_002279539.1| PREDICTED: probable signal peptidase complex...   130   4e-28
ref|NP_001238508.1| uncharacterized protein LOC100305648 [Glycin...   130   5e-28
ref|XP_002312142.1| predicted protein [Populus trichocarpa] gi|2...   128   2e-27

>ref|XP_003633468.1| PREDICTED: probable signal peptidase complex subunit 2 isoform 3
           [Vitis vinifera]
          Length = 186

 Score =  130 bits (328), Expect = 4e-28
 Identities = 64/79 (81%), Positives = 69/79 (87%)
 Frame = -1

Query: 946 GSFNSTGLVVSSNLPRYSDLYTLRIASADPKSVSAKEPVEFTKSVTGWFTKDGILVEGLF 767
           G FNSTGLVVSS LPR+SDLYTL IASADPKS +AK+PVEFTKSVT WFT DGILVEGLF
Sbjct: 108 GFFNSTGLVVSSKLPRFSDLYTLSIASADPKSKAAKDPVEFTKSVTQWFTTDGILVEGLF 167

Query: 766 WKDVEGLISKYTGESRKNK 710
           WKDVEGLI+ Y  E +KNK
Sbjct: 168 WKDVEGLINDYAREPKKNK 186


>ref|XP_003633467.1| PREDICTED: probable signal peptidase complex subunit 2 isoform 2
           [Vitis vinifera]
          Length = 187

 Score =  130 bits (328), Expect = 4e-28
 Identities = 64/79 (81%), Positives = 69/79 (87%)
 Frame = -1

Query: 946 GSFNSTGLVVSSNLPRYSDLYTLRIASADPKSVSAKEPVEFTKSVTGWFTKDGILVEGLF 767
           G FNSTGLVVSS LPR+SDLYTL IASADPKS +AK+PVEFTKSVT WFT DGILVEGLF
Sbjct: 109 GFFNSTGLVVSSKLPRFSDLYTLSIASADPKSKAAKDPVEFTKSVTQWFTTDGILVEGLF 168

Query: 766 WKDVEGLISKYTGESRKNK 710
           WKDVEGLI+ Y  E +KNK
Sbjct: 169 WKDVEGLINDYAREPKKNK 187


>ref|XP_002279539.1| PREDICTED: probable signal peptidase complex subunit 2 isoform 1
           [Vitis vinifera] gi|296086093|emb|CBI31534.3| unnamed
           protein product [Vitis vinifera]
          Length = 195

 Score =  130 bits (328), Expect = 4e-28
 Identities = 64/79 (81%), Positives = 69/79 (87%)
 Frame = -1

Query: 946 GSFNSTGLVVSSNLPRYSDLYTLRIASADPKSVSAKEPVEFTKSVTGWFTKDGILVEGLF 767
           G FNSTGLVVSS LPR+SDLYTL IASADPKS +AK+PVEFTKSVT WFT DGILVEGLF
Sbjct: 117 GFFNSTGLVVSSKLPRFSDLYTLSIASADPKSKAAKDPVEFTKSVTQWFTTDGILVEGLF 176

Query: 766 WKDVEGLISKYTGESRKNK 710
           WKDVEGLI+ Y  E +KNK
Sbjct: 177 WKDVEGLINDYAREPKKNK 195


>ref|NP_001238508.1| uncharacterized protein LOC100305648 [Glycine max]
           gi|255626189|gb|ACU13439.1| unknown [Glycine max]
          Length = 184

 Score =  130 bits (327), Expect = 5e-28
 Identities = 64/83 (77%), Positives = 69/83 (83%)
 Frame = -1

Query: 958 YSTRGSFNSTGLVVSSNLPRYSDLYTLRIASADPKSVSAKEPVEFTKSVTGWFTKDGILV 779
           Y   GSF STGLVVSS LPR+SD+YTL IASADPKS+SA EPV FTKSVT WFTKDGILV
Sbjct: 102 YPPVGSFTSTGLVVSSKLPRFSDMYTLTIASADPKSISANEPVHFTKSVTQWFTKDGILV 161

Query: 778 EGLFWKDVEGLISKYTGESRKNK 710
           EGLFWKDVE LI +YT E +K K
Sbjct: 162 EGLFWKDVEALIVQYTKEPKKGK 184


>ref|XP_002312142.1| predicted protein [Populus trichocarpa] gi|222851962|gb|EEE89509.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  128 bits (321), Expect = 2e-27
 Identities = 60/86 (69%), Positives = 71/86 (82%)
 Frame = -1

Query: 967 VVVYSTRGSFNSTGLVVSSNLPRYSDLYTLRIASADPKSVSAKEPVEFTKSVTGWFTKDG 788
           +V Y  +GS+ STGLVVSS LPR+SD YTL IASADPKS+SA +PV+FTKS+T WFTKDG
Sbjct: 104 LVTYPPKGSYTSTGLVVSSKLPRFSDEYTLSIASADPKSISAGKPVQFTKSITQWFTKDG 163

Query: 787 ILVEGLFWKDVEGLISKYTGESRKNK 710
           +LVEGLFWKDVE LI  Y  E +K+K
Sbjct: 164 VLVEGLFWKDVEALIDDYAAEPKKSK 189


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