BLASTX nr result

ID: Coptis24_contig00010157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010157
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194478.3| Core-2/I-branching beta-1,6-N-acetylglucosaminy...    74   1e-11
ref|XP_002867502.1| glycosyltransferase family 14 protein [Arabi...    74   1e-11
emb|CAB43880.1| putative protein [Arabidopsis thaliana] gi|72696...    74   1e-11
ref|XP_002285024.2| PREDICTED: xylosyltransferase oxt [Vitis vin...    72   6e-11
emb|CBI20295.3| unnamed protein product [Vitis vinifera]               72   6e-11

>ref|NP_194478.3| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family
           protein [Arabidopsis thaliana]
           gi|186514118|ref|NP_001119069.1| Core-2/I-branching
           beta-1,6-N-acetylglucosaminyltransferase family protein
           [Arabidopsis thaliana] gi|332659947|gb|AEE85347.1|
           Core-2/I-branching
           beta-1,6-N-acetylglucosaminyltransferase family protein
           [Arabidopsis thaliana] gi|332659948|gb|AEE85348.1|
           Core-2/I-branching
           beta-1,6-N-acetylglucosaminyltransferase family protein
           [Arabidopsis thaliana]
          Length = 421

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 32/60 (53%), Positives = 42/60 (70%)
 Frame = -2

Query: 524 KELLGRTNASFTPGGWCSGKPLCSKVGDPTNIKPGPGSXXXXXXXXXXXLSPMLARKQCQ 345
           KELLGR N +FTPGGWC+G+P CS+VGDP+ IKPGPG+           L+  L ++QC+
Sbjct: 362 KELLGRGNGNFTPGGWCAGEPKCSRVGDPSKIKPGPGANRLRVLVSRLVLTSKLTQRQCR 421


>ref|XP_002867502.1| glycosyltransferase family 14 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297313338|gb|EFH43761.1| glycosyltransferase
           family 14 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 32/60 (53%), Positives = 42/60 (70%)
 Frame = -2

Query: 524 KELLGRTNASFTPGGWCSGKPLCSKVGDPTNIKPGPGSXXXXXXXXXXXLSPMLARKQCQ 345
           KELLGR N +FTPGGWC+G+P CS+VGDP+ IKPGPG+           L+  L ++QC+
Sbjct: 362 KELLGRGNGNFTPGGWCAGEPKCSRVGDPSKIKPGPGANRLRVLVSRLVLTSKLTQRQCR 421


>emb|CAB43880.1| putative protein [Arabidopsis thaliana] gi|7269602|emb|CAB81398.1|
           putative protein [Arabidopsis thaliana]
          Length = 384

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 32/60 (53%), Positives = 42/60 (70%)
 Frame = -2

Query: 524 KELLGRTNASFTPGGWCSGKPLCSKVGDPTNIKPGPGSXXXXXXXXXXXLSPMLARKQCQ 345
           KELLGR N +FTPGGWC+G+P CS+VGDP+ IKPGPG+           L+  L ++QC+
Sbjct: 325 KELLGRGNGNFTPGGWCAGEPKCSRVGDPSKIKPGPGANRLRVLVSRLVLTSKLTQRQCR 384


>ref|XP_002285024.2| PREDICTED: xylosyltransferase oxt [Vitis vinifera]
          Length = 422

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/60 (53%), Positives = 37/60 (61%)
 Frame = -2

Query: 524 KELLGRTNASFTPGGWCSGKPLCSKVGDPTNIKPGPGSXXXXXXXXXXXLSPMLARKQCQ 345
           K+LLGR    FTPGGWCSG P CSKVGDPT +KPGPG+           LS    + QC+
Sbjct: 363 KDLLGRKKGGFTPGGWCSGNPPCSKVGDPTKLKPGPGAQRLRLLVSRLLLSARYGQNQCK 422


>emb|CBI20295.3| unnamed protein product [Vitis vinifera]
          Length = 416

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/60 (53%), Positives = 37/60 (61%)
 Frame = -2

Query: 524 KELLGRTNASFTPGGWCSGKPLCSKVGDPTNIKPGPGSXXXXXXXXXXXLSPMLARKQCQ 345
           K+LLGR    FTPGGWCSG P CSKVGDPT +KPGPG+           LS    + QC+
Sbjct: 357 KDLLGRKKGGFTPGGWCSGNPPCSKVGDPTKLKPGPGAQRLRLLVSRLLLSARYGQNQCK 416


Top