BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010155
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis ...   197   3e-48
ref|XP_002527773.1| conserved hypothetical protein [Ricinus comm...   179   9e-43
ref|XP_004173054.1| PREDICTED: F-box protein SKIP28-like, partia...   175   1e-41
ref|XP_004150124.1| PREDICTED: F-box protein SKIP28-like [Cucumi...   175   1e-41
ref|NP_001240191.1| uncharacterized protein LOC100806504 [Glycin...   174   2e-41

>ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis vinifera]
          Length = 338

 Score =  197 bits (500), Expect = 3e-48
 Identities = 84/175 (48%), Positives = 124/175 (70%), Gaps = 6/175 (3%)
 Frame = -1

Query: 833 NPHINKLYIPSCSQLTPDGVVRAVKILAKHNNKL-FLRLENIYNITKEHLQIIYSCLKLN 657
           NP IN+LY+P+C+ LTP+G++RAVK L +H   L  +R+  +YN+ KEHL+ + S L++N
Sbjct: 134 NPLINRLYLPACTGLTPEGIMRAVKTLTEHYQALKCVRINGVYNMKKEHLETLSSYLQMN 193

Query: 656 PEEQNRQKSKLYLGYGH-----FQVQNDLDPIDIEVCPKCKDVRLVFECPRESCRSKNKR 492
           P +   Q  +L   + H      +V+    PID+E+CP+C +VR+VF+CPRE+C+ K +R
Sbjct: 194 PAKMEGQMQQLCFFHDHRNISVLRVEESYRPIDLEICPRCNEVRMVFDCPRETCKKKRER 253

Query: 491 PLAACKGCLLCIPRCEGCGGCVDLDDEIGETVCLDLVCLECWLQLRKCNLCNKPY 327
            +A C+GC  CIPRCE CG C+++ +E GE VC D++C +CWLQL KCN CN+PY
Sbjct: 254 AMAECRGCYFCIPRCEECGKCIEV-EEPGEVVCADVLCSDCWLQLPKCNFCNRPY 307


>ref|XP_002527773.1| conserved hypothetical protein [Ricinus communis]
           gi|223532808|gb|EEF34583.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 332

 Score =  179 bits (453), Expect = 9e-43
 Identities = 78/173 (45%), Positives = 121/173 (69%), Gaps = 4/173 (2%)
 Frame = -1

Query: 833 NPHINKLYIPSCSQLTPDGVVRAVKILAKHNNKL-FLRLENIYNITKEHLQIIYSCLKLN 657
           NP+INKL++P+C+ LTP+G+++AVKIL++H N L  L++  IYN+ K+HL+ +YS L++N
Sbjct: 134 NPYINKLHLPACTGLTPEGIIKAVKILSQHPNSLKSLQINGIYNLKKQHLETLYSYLQMN 193

Query: 656 PEEQNRQKSKLYLGYGHFQVQNDLDP---IDIEVCPKCKDVRLVFECPRESCRSKNKRPL 486
           P  Q++ +  LY  Y         +    +D+++CP+C +V++VF+C RE+C  K  R +
Sbjct: 194 PS-QHKPQHILYHIYRISPSSRSTESGRIVDVDICPQCNEVQIVFDCSRETCMQKRDRLV 252

Query: 485 AACKGCLLCIPRCEGCGGCVDLDDEIGETVCLDLVCLECWLQLRKCNLCNKPY 327
           A C+GC  CI RCE CGGC+D +++  +  C D++C +CWL L KCN CNKPY
Sbjct: 253 ADCRGCNFCISRCEECGGCIDAEEQ-EDAACADILCSDCWLCLSKCNYCNKPY 304


>ref|XP_004173054.1| PREDICTED: F-box protein SKIP28-like, partial [Cucumis sativus]
          Length = 370

 Score =  175 bits (443), Expect = 1e-41
 Identities = 88/181 (48%), Positives = 121/181 (66%), Gaps = 11/181 (6%)
 Frame = -1

Query: 836 NNPHINKLYIPSCSQLTPDGVVRAVKILAKHNNKLF-LRLENIYNITKEHLQIIYSCL-- 666
           NNP + KLY+P C+ LTP+GVVRAVK L++ ++ L  L +  IYNI  +HL+++ S L  
Sbjct: 136 NNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLE 195

Query: 665 --KLNPEEQNRQKSKLYLGYGHFQ----VQNDLDP-IDIEVCPKCKDVRLVFECPRESCR 507
              LN +++ RQ   LY  + H      + +D  P ID+++CPKC D+R V++C RE C+
Sbjct: 196 NRSLNKQQEWRQVHHLY--HEHVDRPRLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCK 253

Query: 506 SKN-KRPLAACKGCLLCIPRCEGCGGCVDLDDEIGETVCLDLVCLECWLQLRKCNLCNKP 330
            K  +  LA C+GC+ CIPRCE CGGCVD DDEI E +C D++C  CW QL KCN CN+P
Sbjct: 254 IKQGENLLADCRGCICCIPRCEECGGCVD-DDEIEEAICSDILCSSCWFQLPKCNHCNRP 312

Query: 329 Y 327
           Y
Sbjct: 313 Y 313


>ref|XP_004150124.1| PREDICTED: F-box protein SKIP28-like [Cucumis sativus]
          Length = 336

 Score =  175 bits (443), Expect = 1e-41
 Identities = 88/181 (48%), Positives = 121/181 (66%), Gaps = 11/181 (6%)
 Frame = -1

Query: 836 NNPHINKLYIPSCSQLTPDGVVRAVKILAKHNNKLF-LRLENIYNITKEHLQIIYSCL-- 666
           NNP + KLY+P C+ LTP+GVVRAVK L++ ++ L  L +  IYNI  +HL+++ S L  
Sbjct: 136 NNPLLTKLYVPGCTSLTPEGVVRAVKTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLE 195

Query: 665 --KLNPEEQNRQKSKLYLGYGHFQ----VQNDLDP-IDIEVCPKCKDVRLVFECPRESCR 507
              LN +++ RQ   LY  + H      + +D  P ID+++CPKC D+R V++C RE C+
Sbjct: 196 NRSLNKQQEWRQVHHLY--HEHVDRPRLLSSDFLPVIDVQICPKCYDIRNVYDCSRERCK 253

Query: 506 SKN-KRPLAACKGCLLCIPRCEGCGGCVDLDDEIGETVCLDLVCLECWLQLRKCNLCNKP 330
            K  +  LA C+GC+ CIPRCE CGGCVD DDEI E +C D++C  CW QL KCN CN+P
Sbjct: 254 IKQGENLLADCRGCICCIPRCEECGGCVD-DDEIEEAICSDILCSSCWFQLPKCNHCNRP 312

Query: 329 Y 327
           Y
Sbjct: 313 Y 313


>ref|NP_001240191.1| uncharacterized protein LOC100806504 [Glycine max]
           gi|255635560|gb|ACU18130.1| unknown [Glycine max]
          Length = 278

 Score =  174 bits (442), Expect = 2e-41
 Identities = 84/176 (47%), Positives = 118/176 (67%), Gaps = 7/176 (3%)
 Frame = -1

Query: 833 NPHINKLYIPSCSQLTPDGVVRAVKILAKHNNKL-FLRLENIYNITKEHLQIIYSCLKLN 657
           NP INKL+IP+C+ +TP+GV+ AVK L + +N L  L +  IYNI KEHL ++   L  N
Sbjct: 71  NPLINKLHIPACTGITPEGVLGAVKTLCQRSNCLKTLSINGIYNIQKEHLDMLIMNLGKN 130

Query: 656 P--EEQNRQKSKLYL----GYGHFQVQNDLDPIDIEVCPKCKDVRLVFECPRESCRSKNK 495
              EEQ +Q+  +Y      +  F+ +     ID+E+CP+C +VR+V++CP+E C ++ +
Sbjct: 131 QPLEEQQKQQQPVYYHERCSFSVFKQEESWRLIDLEICPRCFEVRMVYDCPKEHC-TRRE 189

Query: 494 RPLAACKGCLLCIPRCEGCGGCVDLDDEIGETVCLDLVCLECWLQLRKCNLCNKPY 327
            PLA C+GC  CIPRCE CGGC++   E+ E  C D+ CLECWLQL KC+ CNKPY
Sbjct: 190 WPLAPCRGCNFCIPRCENCGGCIE-SGEVEEGACEDIFCLECWLQLPKCSFCNKPY 244