BLASTX nr result

ID: Coptis24_contig00010147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010147
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-...   127   1e-27
gb|AFK40115.1| unknown [Lotus japonicus]                              127   1e-27
ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndr...   126   2e-27
emb|CBI17293.3| unnamed protein product [Vitis vinifera]              126   2e-27

>ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|222839339|gb|EEE77676.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  129 bits (325), Expect = 2e-28
 Identities = 58/95 (61%), Positives = 76/95 (80%)
 Frame = +2

Query: 2   GDADKIYNDYNIRIQSIEELSCLANKKLDGFRRRWSLAALTETLTSKELEKPNKIRLGNW 181
           GD  K++ DYN  ++S+E+LS LAN+KLDG  + W L AL + L  KEL+KPNKIRLGNW
Sbjct: 215 GDCAKVFRDYNASVKSVEDLSYLANQKLDGKPKTWGLQALAKILVCKELQKPNKIRLGNW 274

Query: 182 EVEVLSRDQLLYAATDAFASWQLYEILKTFPDLSE 286
           +V+VLS++QL YAATDAFASWQLY++LK+ PD  +
Sbjct: 275 QVDVLSKEQLQYAATDAFASWQLYQVLKSLPDAKD 309


>ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 314

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/101 (57%), Positives = 79/101 (78%)
 Frame = +2

Query: 5   DADKIYNDYNIRIQSIEELSCLANKKLDGFRRRWSLAALTETLTSKELEKPNKIRLGNWE 184
           DA K++ +YN+ ++ + E+S LAN+KL G  ++W L ALTETL SKEL+KP++IRLGNWE
Sbjct: 213 DASKVFKEYNVSVKPLNEISDLANQKLAGVPKKWGLRALTETLISKELQKPDRIRLGNWE 272

Query: 185 VEVLSRDQLLYAATDAFASWQLYEILKTFPDLSEKQNEQEV 307
           V VLS+DQL YAATDAFASW L+EILK FP + +  + + +
Sbjct: 273 VAVLSKDQLQYAATDAFASWYLHEILKGFPHVEKVADSEPI 313


>gb|AFK40115.1| unknown [Lotus japonicus]
          Length = 209

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/95 (62%), Positives = 74/95 (77%)
 Frame = +2

Query: 5   DADKIYNDYNIRIQSIEELSCLANKKLDGFRRRWSLAALTETLTSKELEKPNKIRLGNWE 184
           DA K++ DYN+ ++ +E+LS  AN+KL G   +W LAALTET+ SK+L+KPNKIRLGNWE
Sbjct: 108 DASKVFRDYNVSVKGVEDLSFHANEKLGGGINKWGLAALTETVLSKQLKKPNKIRLGNWE 167

Query: 185 VEVLSRDQLLYAATDAFASWQLYEILKTFPDLSEK 289
             VLS++QL YAATDAFASW LYE +K  PD S K
Sbjct: 168 TPVLSKEQLQYAATDAFASWYLYEAIKNLPDSSGK 202


>ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndrome-like
           exonuclease-like [Vitis vinifera]
          Length = 331

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/99 (58%), Positives = 79/99 (79%)
 Frame = +2

Query: 5   DADKIYNDYNIRIQSIEELSCLANKKLDGFRRRWSLAALTETLTSKELEKPNKIRLGNWE 184
           DA K++ D+++ ++ +E+LS LAN+KL G  ++W L +LTE L SK+L KPNKIRLGNWE
Sbjct: 219 DAVKVFKDHSVSVKDLEDLSYLANQKLGGDAKKWGLGSLTEMLISKQLLKPNKIRLGNWE 278

Query: 185 VEVLSRDQLLYAATDAFASWQLYEILKTFPDLSEKQNEQ 301
            +VLS+ QL YAATDAFASW LYE+LK+FPD +E + E+
Sbjct: 279 ADVLSKAQLEYAATDAFASWYLYEVLKSFPDTAENKIEE 317


>emb|CBI17293.3| unnamed protein product [Vitis vinifera]
          Length = 301

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/99 (58%), Positives = 79/99 (79%)
 Frame = +2

Query: 5   DADKIYNDYNIRIQSIEELSCLANKKLDGFRRRWSLAALTETLTSKELEKPNKIRLGNWE 184
           DA K++ D+++ ++ +E+LS LAN+KL G  ++W L +LTE L SK+L KPNKIRLGNWE
Sbjct: 189 DAVKVFKDHSVSVKDLEDLSYLANQKLGGDAKKWGLGSLTEMLISKQLLKPNKIRLGNWE 248

Query: 185 VEVLSRDQLLYAATDAFASWQLYEILKTFPDLSEKQNEQ 301
            +VLS+ QL YAATDAFASW LYE+LK+FPD +E + E+
Sbjct: 249 ADVLSKAQLEYAATDAFASWYLYEVLKSFPDTAENKIEE 287


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