BLASTX nr result
ID: Coptis24_contig00010147
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010147 (501 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|2... 129 2e-28 ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-... 127 1e-27 gb|AFK40115.1| unknown [Lotus japonicus] 127 1e-27 ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndr... 126 2e-27 emb|CBI17293.3| unnamed protein product [Vitis vinifera] 126 2e-27 >ref|XP_002328909.1| predicted protein [Populus trichocarpa] gi|222839339|gb|EEE77676.1| predicted protein [Populus trichocarpa] Length = 323 Score = 129 bits (325), Expect = 2e-28 Identities = 58/95 (61%), Positives = 76/95 (80%) Frame = +2 Query: 2 GDADKIYNDYNIRIQSIEELSCLANKKLDGFRRRWSLAALTETLTSKELEKPNKIRLGNW 181 GD K++ DYN ++S+E+LS LAN+KLDG + W L AL + L KEL+KPNKIRLGNW Sbjct: 215 GDCAKVFRDYNASVKSVEDLSYLANQKLDGKPKTWGLQALAKILVCKELQKPNKIRLGNW 274 Query: 182 EVEVLSRDQLLYAATDAFASWQLYEILKTFPDLSE 286 +V+VLS++QL YAATDAFASWQLY++LK+ PD + Sbjct: 275 QVDVLSKEQLQYAATDAFASWQLYQVLKSLPDAKD 309 >ref|XP_004133981.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus] Length = 314 Score = 127 bits (318), Expect = 1e-27 Identities = 58/101 (57%), Positives = 79/101 (78%) Frame = +2 Query: 5 DADKIYNDYNIRIQSIEELSCLANKKLDGFRRRWSLAALTETLTSKELEKPNKIRLGNWE 184 DA K++ +YN+ ++ + E+S LAN+KL G ++W L ALTETL SKEL+KP++IRLGNWE Sbjct: 213 DASKVFKEYNVSVKPLNEISDLANQKLAGVPKKWGLRALTETLISKELQKPDRIRLGNWE 272 Query: 185 VEVLSRDQLLYAATDAFASWQLYEILKTFPDLSEKQNEQEV 307 V VLS+DQL YAATDAFASW L+EILK FP + + + + + Sbjct: 273 VAVLSKDQLQYAATDAFASWYLHEILKGFPHVEKVADSEPI 313 >gb|AFK40115.1| unknown [Lotus japonicus] Length = 209 Score = 127 bits (318), Expect = 1e-27 Identities = 59/95 (62%), Positives = 74/95 (77%) Frame = +2 Query: 5 DADKIYNDYNIRIQSIEELSCLANKKLDGFRRRWSLAALTETLTSKELEKPNKIRLGNWE 184 DA K++ DYN+ ++ +E+LS AN+KL G +W LAALTET+ SK+L+KPNKIRLGNWE Sbjct: 108 DASKVFRDYNVSVKGVEDLSFHANEKLGGGINKWGLAALTETVLSKQLKKPNKIRLGNWE 167 Query: 185 VEVLSRDQLLYAATDAFASWQLYEILKTFPDLSEK 289 VLS++QL YAATDAFASW LYE +K PD S K Sbjct: 168 TPVLSKEQLQYAATDAFASWYLYEAIKNLPDSSGK 202 >ref|XP_003632043.1| PREDICTED: LOW QUALITY PROTEIN: Werner Syndrome-like exonuclease-like [Vitis vinifera] Length = 331 Score = 126 bits (317), Expect = 2e-27 Identities = 58/99 (58%), Positives = 79/99 (79%) Frame = +2 Query: 5 DADKIYNDYNIRIQSIEELSCLANKKLDGFRRRWSLAALTETLTSKELEKPNKIRLGNWE 184 DA K++ D+++ ++ +E+LS LAN+KL G ++W L +LTE L SK+L KPNKIRLGNWE Sbjct: 219 DAVKVFKDHSVSVKDLEDLSYLANQKLGGDAKKWGLGSLTEMLISKQLLKPNKIRLGNWE 278 Query: 185 VEVLSRDQLLYAATDAFASWQLYEILKTFPDLSEKQNEQ 301 +VLS+ QL YAATDAFASW LYE+LK+FPD +E + E+ Sbjct: 279 ADVLSKAQLEYAATDAFASWYLYEVLKSFPDTAENKIEE 317 >emb|CBI17293.3| unnamed protein product [Vitis vinifera] Length = 301 Score = 126 bits (317), Expect = 2e-27 Identities = 58/99 (58%), Positives = 79/99 (79%) Frame = +2 Query: 5 DADKIYNDYNIRIQSIEELSCLANKKLDGFRRRWSLAALTETLTSKELEKPNKIRLGNWE 184 DA K++ D+++ ++ +E+LS LAN+KL G ++W L +LTE L SK+L KPNKIRLGNWE Sbjct: 189 DAVKVFKDHSVSVKDLEDLSYLANQKLGGDAKKWGLGSLTEMLISKQLLKPNKIRLGNWE 248 Query: 185 VEVLSRDQLLYAATDAFASWQLYEILKTFPDLSEKQNEQ 301 +VLS+ QL YAATDAFASW LYE+LK+FPD +E + E+ Sbjct: 249 ADVLSKAQLEYAATDAFASWYLYEVLKSFPDTAENKIEE 287