BLASTX nr result
ID: Coptis24_contig00010142
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010142 (366 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281726.1| PREDICTED: double-strand break repair protei... 77 1e-12 ref|XP_003539581.1| PREDICTED: double-strand break repair protei... 70 2e-10 ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|2... 65 7e-09 ref|XP_003596491.1| Meiotic recombination [Medicago truncatula] ... 64 1e-08 ref|XP_002525759.1| meiotic recombination repair protein, putati... 62 4e-08 >ref|XP_002281726.1| PREDICTED: double-strand break repair protein MRE11 [Vitis vinifera] gi|302143084|emb|CBI20379.3| unnamed protein product [Vitis vinifera] Length = 731 Score = 77.0 bits (188), Expect = 1e-12 Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 3/108 (2%) Frame = +2 Query: 50 LKQTTLDATMGIRRSERXXXXXXXXXXXXXXXDEENSGSPSXXXXXXXXXXXXXXISENE 229 LKQ TLD+++G R SER DE+N S S SEN+ Sbjct: 600 LKQMTLDSSLGFRHSERSASVAATAAVRNLADDEDNVESSSSDEAGKYGINEVDDSSEND 659 Query: 230 ESLPVRGQKRVAPKG---STASSSKRGRKLDTSSIHRKLMNIDDDEDE 364 E+L +G+KR AP+G +SSKRGRK D++SI R LMN DDD+D+ Sbjct: 660 ENLQGKGRKRAAPRGRGRGATTSSKRGRKSDSTSIQRMLMNKDDDDDD 707 >ref|XP_003539581.1| PREDICTED: double-strand break repair protein MRE11-like [Glycine max] Length = 714 Score = 69.7 bits (169), Expect = 2e-10 Identities = 45/108 (41%), Positives = 56/108 (51%), Gaps = 3/108 (2%) Frame = +2 Query: 50 LKQTTLDATMGIRRSERXXXXXXXXXXXXXXXDEENSGSPSXXXXXXXXXXXXXXISENE 229 +KQTT+D +G R S+R D++N S S SENE Sbjct: 585 MKQTTIDGALGFRVSQRSASVAAATAIRSGA-DDDNLASASSDDANKNDVEEIDDSSENE 643 Query: 230 ESLPVRGQKRVAPKG---STASSSKRGRKLDTSSIHRKLMNIDDDEDE 364 +LP GQKR A KG + SSKRGRK D SSIHR L+N DDD+D+ Sbjct: 644 SNLP--GQKRAASKGRGRGSTQSSKRGRKSDNSSIHRMLVNNDDDDDD 689 >ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|222871776|gb|EEF08907.1| predicted protein [Populus trichocarpa] Length = 772 Score = 64.7 bits (156), Expect = 7e-09 Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 4/109 (3%) Frame = +2 Query: 50 LKQTTLDATMGIRRSERXXXXXXXXXXXXXXXDEENSGSPSXXXXXXXXXXXXXXISENE 229 LKQTTLDAT+G R+S+R ++EN S S S ++ Sbjct: 593 LKQTTLDATLGFRQSQRSASVSATAAVRSIAVEDENVDSASSEDSKKLGMNEVADSSNDD 652 Query: 230 ESLPVRGQ--KRVAPKGST--ASSSKRGRKLDTSSIHRKLMNIDDDEDE 364 ES+ +G+ KR A +G A+ SKRGRK + S++ R LMN DDD+D+ Sbjct: 653 ESIQGKGKGRKRAAARGRGRGATPSKRGRKSENSALQRMLMNKDDDDDD 701 >ref|XP_003596491.1| Meiotic recombination [Medicago truncatula] gi|355485539|gb|AES66742.1| Meiotic recombination [Medicago truncatula] Length = 747 Score = 63.9 bits (154), Expect = 1e-08 Identities = 42/108 (38%), Positives = 53/108 (49%), Gaps = 3/108 (2%) Frame = +2 Query: 50 LKQTTLDATMGIRRSERXXXXXXXXXXXXXXXDEENSGSPSXXXXXXXXXXXXXXISENE 229 LKQTTLD ++G R S+R ++ S S+NE Sbjct: 585 LKQTTLDGSLGFRPSQRSAATSIQSGA------DDGDNMASSDDAKGNAVEEIDDSSDNE 638 Query: 230 ESLPVRGQKRVAPKG---STASSSKRGRKLDTSSIHRKLMNIDDDEDE 364 +LP R KR AP+G SSKRGRK + SSIHR LMN DDD+D+ Sbjct: 639 SNLPAR--KRAAPRGRGRGATQSSKRGRKSENSSIHRMLMNNDDDDDD 684 >ref|XP_002525759.1| meiotic recombination repair protein, putative [Ricinus communis] gi|223534909|gb|EEF36595.1| meiotic recombination repair protein, putative [Ricinus communis] Length = 765 Score = 62.4 bits (150), Expect = 4e-08 Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 1/106 (0%) Frame = +2 Query: 50 LKQTTLDATMGIRRSERXXXXXXXXXXXXXXXDEENSGSPSXXXXXXXXXXXXXXISENE 229 LKQTTLD ++G R+S+R +EEN S S S++ Sbjct: 607 LKQTTLDVSLGFRQSQRSASVAATAAVRSIADEEENVESASSEDAENRINEVGDS-SDDA 665 Query: 230 ESLPVRGQKRVAPKG-STASSSKRGRKLDTSSIHRKLMNIDDDEDE 364 E +P +G KR AP G SKRG+K D S+I R LM DDD+D+ Sbjct: 666 ERIPGKGGKRAAPIGRGRGGPSKRGKKSDNSAIQRMLMGKDDDDDD 711