BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010142
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281726.1| PREDICTED: double-strand break repair protei...    77   1e-12
ref|XP_003539581.1| PREDICTED: double-strand break repair protei...    70   2e-10
ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_003596491.1| Meiotic recombination [Medicago truncatula] ...    64   1e-08
ref|XP_002525759.1| meiotic recombination repair protein, putati...    62   4e-08

>ref|XP_002281726.1| PREDICTED: double-strand break repair protein MRE11 [Vitis
           vinifera] gi|302143084|emb|CBI20379.3| unnamed protein
           product [Vitis vinifera]
          Length = 731

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
 Frame = +2

Query: 50  LKQTTLDATMGIRRSERXXXXXXXXXXXXXXXDEENSGSPSXXXXXXXXXXXXXXISENE 229
           LKQ TLD+++G R SER               DE+N  S S               SEN+
Sbjct: 600 LKQMTLDSSLGFRHSERSASVAATAAVRNLADDEDNVESSSSDEAGKYGINEVDDSSEND 659

Query: 230 ESLPVRGQKRVAPKG---STASSSKRGRKLDTSSIHRKLMNIDDDEDE 364
           E+L  +G+KR AP+G      +SSKRGRK D++SI R LMN DDD+D+
Sbjct: 660 ENLQGKGRKRAAPRGRGRGATTSSKRGRKSDSTSIQRMLMNKDDDDDD 707


>ref|XP_003539581.1| PREDICTED: double-strand break repair protein MRE11-like [Glycine
           max]
          Length = 714

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 45/108 (41%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
 Frame = +2

Query: 50  LKQTTLDATMGIRRSERXXXXXXXXXXXXXXXDEENSGSPSXXXXXXXXXXXXXXISENE 229
           +KQTT+D  +G R S+R               D++N  S S               SENE
Sbjct: 585 MKQTTIDGALGFRVSQRSASVAAATAIRSGA-DDDNLASASSDDANKNDVEEIDDSSENE 643

Query: 230 ESLPVRGQKRVAPKG---STASSSKRGRKLDTSSIHRKLMNIDDDEDE 364
            +LP  GQKR A KG    +  SSKRGRK D SSIHR L+N DDD+D+
Sbjct: 644 SNLP--GQKRAASKGRGRGSTQSSKRGRKSDNSSIHRMLVNNDDDDDD 689


>ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|222871776|gb|EEF08907.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
 Frame = +2

Query: 50  LKQTTLDATMGIRRSERXXXXXXXXXXXXXXXDEENSGSPSXXXXXXXXXXXXXXISENE 229
           LKQTTLDAT+G R+S+R               ++EN  S S               S ++
Sbjct: 593 LKQTTLDATLGFRQSQRSASVSATAAVRSIAVEDENVDSASSEDSKKLGMNEVADSSNDD 652

Query: 230 ESLPVRGQ--KRVAPKGST--ASSSKRGRKLDTSSIHRKLMNIDDDEDE 364
           ES+  +G+  KR A +G    A+ SKRGRK + S++ R LMN DDD+D+
Sbjct: 653 ESIQGKGKGRKRAAARGRGRGATPSKRGRKSENSALQRMLMNKDDDDDD 701


>ref|XP_003596491.1| Meiotic recombination [Medicago truncatula]
           gi|355485539|gb|AES66742.1| Meiotic recombination
           [Medicago truncatula]
          Length = 747

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 42/108 (38%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
 Frame = +2

Query: 50  LKQTTLDATMGIRRSERXXXXXXXXXXXXXXXDEENSGSPSXXXXXXXXXXXXXXISENE 229
           LKQTTLD ++G R S+R                ++     S               S+NE
Sbjct: 585 LKQTTLDGSLGFRPSQRSAATSIQSGA------DDGDNMASSDDAKGNAVEEIDDSSDNE 638

Query: 230 ESLPVRGQKRVAPKG---STASSSKRGRKLDTSSIHRKLMNIDDDEDE 364
            +LP R  KR AP+G       SSKRGRK + SSIHR LMN DDD+D+
Sbjct: 639 SNLPAR--KRAAPRGRGRGATQSSKRGRKSENSSIHRMLMNNDDDDDD 684


>ref|XP_002525759.1| meiotic recombination repair protein, putative [Ricinus communis]
           gi|223534909|gb|EEF36595.1| meiotic recombination repair
           protein, putative [Ricinus communis]
          Length = 765

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
 Frame = +2

Query: 50  LKQTTLDATMGIRRSERXXXXXXXXXXXXXXXDEENSGSPSXXXXXXXXXXXXXXISENE 229
           LKQTTLD ++G R+S+R               +EEN  S S               S++ 
Sbjct: 607 LKQTTLDVSLGFRQSQRSASVAATAAVRSIADEEENVESASSEDAENRINEVGDS-SDDA 665

Query: 230 ESLPVRGQKRVAPKG-STASSSKRGRKLDTSSIHRKLMNIDDDEDE 364
           E +P +G KR AP G      SKRG+K D S+I R LM  DDD+D+
Sbjct: 666 ERIPGKGGKRAAPIGRGRGGPSKRGKKSDNSAIQRMLMGKDDDDDD 711