BLASTX nr result

ID: Coptis24_contig00010138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010138
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279490.2| PREDICTED: translation initiation factor IF-...   257   1e-66
ref|XP_004173508.1| PREDICTED: translation initiation factor IF-...   235   6e-60
ref|XP_004149759.1| PREDICTED: translation initiation factor IF-...   235   6e-60
ref|XP_002509907.1| mitochondrial translational initiation facto...   232   4e-59
ref|NP_001063668.1| Os09g0515500 [Oryza sativa Japonica Group] g...   224   1e-56

>ref|XP_002279490.2| PREDICTED: translation initiation factor IF-2-like [Vitis vinifera]
            gi|296089697|emb|CBI39516.3| unnamed protein product
            [Vitis vinifera]
          Length = 725

 Score =  257 bits (657), Expect = 1e-66
 Identities = 126/151 (83%), Positives = 140/151 (92%)
 Frame = +2

Query: 2    ANRASIQIKVHRVIYHLLEDLGNFIVDKAPGTLETQVAGEAQVLSIFELKGRTKSQGGDM 181
            A+RASI++K+HRVIYHLLED+GN IVDKAPGT ETQVAGEAQVL+IFELKGR+KS+G D+
Sbjct: 575  ASRASIKVKIHRVIYHLLEDIGNLIVDKAPGTFETQVAGEAQVLNIFELKGRSKSKGDDV 634

Query: 182  KIAGCRVTDGRVTKVSTMRLLRSGEVIFEGSCRSLKREKQDVDAVGKGNECGLAIDAYND 361
            KIAGCRV DGRVTK STMRLLRSGEV+FEGSC SLKREKQDVD VGKGNECGL I  ++D
Sbjct: 635  KIAGCRVIDGRVTKSSTMRLLRSGEVMFEGSCVSLKREKQDVDTVGKGNECGLVIGDWDD 694

Query: 362  FQIGDVIQCLEQVKRKPKFVSSESGSVRIEC 454
            FQIGDVIQCLEQV RKPKF+SSESG+VRIEC
Sbjct: 695  FQIGDVIQCLEQVNRKPKFISSESGAVRIEC 725


>ref|XP_004173508.1| PREDICTED: translation initiation factor IF-2-like, partial
           [Cucumis sativus]
          Length = 540

 Score =  235 bits (599), Expect = 6e-60
 Identities = 114/151 (75%), Positives = 134/151 (88%)
 Frame = +2

Query: 2   ANRASIQIKVHRVIYHLLEDLGNFIVDKAPGTLETQVAGEAQVLSIFELKGRTKSQGGDM 181
           A +A  +I +HRVIYHLLED+GN IVDKAPGT ET+VAGE +VL+IFELKGR+KS+G D+
Sbjct: 390 ATQAGTKIIIHRVIYHLLEDVGNLIVDKAPGTSETRVAGEGEVLNIFELKGRSKSKGPDI 449

Query: 182 KIAGCRVTDGRVTKVSTMRLLRSGEVIFEGSCRSLKREKQDVDAVGKGNECGLAIDAYND 361
           +IAGCRVTDG  ++ STMRLLRSGEV+FEGSC SLKREKQDVDAV KGNECGL I  ++D
Sbjct: 450 RIAGCRVTDGCFSRSSTMRLLRSGEVLFEGSCASLKREKQDVDAVKKGNECGLVIQNWDD 509

Query: 362 FQIGDVIQCLEQVKRKPKFVSSESGSVRIEC 454
           FQ+GDV+QCLEQV RKPKF+SSESG+VRIEC
Sbjct: 510 FQVGDVVQCLEQVIRKPKFISSESGAVRIEC 540


>ref|XP_004149759.1| PREDICTED: translation initiation factor IF-2-like [Cucumis sativus]
          Length = 724

 Score =  235 bits (599), Expect = 6e-60
 Identities = 114/151 (75%), Positives = 134/151 (88%)
 Frame = +2

Query: 2    ANRASIQIKVHRVIYHLLEDLGNFIVDKAPGTLETQVAGEAQVLSIFELKGRTKSQGGDM 181
            A +A  +I +HRVIYHLLED+GN IVDKAPGT ET+VAGE +VL+IFELKGR+KS+G D+
Sbjct: 574  ATQAGTKIIIHRVIYHLLEDVGNLIVDKAPGTSETRVAGEGEVLNIFELKGRSKSKGPDI 633

Query: 182  KIAGCRVTDGRVTKVSTMRLLRSGEVIFEGSCRSLKREKQDVDAVGKGNECGLAIDAYND 361
            +IAGCRVTDG  ++ STMRLLRSGEV+FEGSC SLKREKQDVDAV KGNECGL I  ++D
Sbjct: 634  RIAGCRVTDGCFSRSSTMRLLRSGEVLFEGSCASLKREKQDVDAVKKGNECGLVIQNWDD 693

Query: 362  FQIGDVIQCLEQVKRKPKFVSSESGSVRIEC 454
            FQ+GDV+QCLEQV RKPKF+SSESG+VRIEC
Sbjct: 694  FQVGDVVQCLEQVIRKPKFISSESGAVRIEC 724


>ref|XP_002509907.1| mitochondrial translational initiation factor, putative [Ricinus
           communis] gi|223549806|gb|EEF51294.1| mitochondrial
           translational initiation factor, putative [Ricinus
           communis]
          Length = 458

 Score =  232 bits (592), Expect = 4e-59
 Identities = 112/151 (74%), Positives = 133/151 (88%)
 Frame = +2

Query: 2   ANRASIQIKVHRVIYHLLEDLGNFIVDKAPGTLETQVAGEAQVLSIFELKGRTKSQGGDM 181
           A +A I+I  HRVIYHLLE++GN IVDKAPGT ETQVAGEA+VL+IFELKGR+K+ GGD+
Sbjct: 308 ATQARIKIMQHRVIYHLLEEVGNLIVDKAPGTSETQVAGEAEVLNIFELKGRSKAIGGDI 367

Query: 182 KIAGCRVTDGRVTKVSTMRLLRSGEVIFEGSCRSLKREKQDVDAVGKGNECGLAIDAYND 361
           KIAGCRV DG V K +T+RLLRSGEV+FEG+C SLKR KQDV+ VGKGNECGL I  ++D
Sbjct: 368 KIAGCRVLDGHVVKSATIRLLRSGEVVFEGACTSLKRAKQDVERVGKGNECGLVIGNWDD 427

Query: 362 FQIGDVIQCLEQVKRKPKFVSSESGSVRIEC 454
           F++GD+IQCLEQV RKPKF+SSESG+VRIEC
Sbjct: 428 FRVGDIIQCLEQVVRKPKFISSESGAVRIEC 458


>ref|NP_001063668.1| Os09g0515500 [Oryza sativa Japonica Group]
            gi|50725362|dbj|BAD34434.1| putative translation
            initiation factor IF-2 [Oryza sativa Japonica Group]
            gi|50726238|dbj|BAD33814.1| putative translation
            initiation factor IF-2 [Oryza sativa Japonica Group]
            gi|113631901|dbj|BAF25582.1| Os09g0515500 [Oryza sativa
            Japonica Group] gi|125606325|gb|EAZ45361.1| hypothetical
            protein OsJ_30008 [Oryza sativa Japonica Group]
            gi|215686824|dbj|BAG89674.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 716

 Score =  224 bits (570), Expect = 1e-56
 Identities = 104/151 (68%), Positives = 132/151 (87%)
 Frame = +2

Query: 2    ANRASIQIKVHRVIYHLLEDLGNFIVDKAPGTLETQVAGEAQVLSIFELKGRTKSQGGDM 181
            A +A+I+I +H+VIYHLLE++G  IV+KAPGT ETQV+GEA+VL+IFELKGR+KS+G D+
Sbjct: 566  ATQANIKILLHKVIYHLLEEMGREIVEKAPGTPETQVSGEAEVLNIFELKGRSKSKGPDI 625

Query: 182  KIAGCRVTDGRVTKVSTMRLLRSGEVIFEGSCRSLKREKQDVDAVGKGNECGLAIDAYND 361
            KIAGCR+TDG ++K  TMRLLRSG+V+FEG C SLKREKQD + V KGN+CGL I   ND
Sbjct: 626  KIAGCRITDGHLSKTGTMRLLRSGDVVFEGPCASLKREKQDAETVDKGNDCGLVIQDCND 685

Query: 362  FQIGDVIQCLEQVKRKPKFVSSESGSVRIEC 454
            FQ+GD++QCLEQV RKPKF+S++SG+VRIEC
Sbjct: 686  FQVGDIVQCLEQVIRKPKFISTQSGAVRIEC 716


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