BLASTX nr result

ID: Coptis24_contig00010137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010137
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266643.2| PREDICTED: uncharacterized protein LOC100254...   142   2e-45
ref|XP_002314555.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-45
ref|XP_002514969.1| conserved hypothetical protein [Ricinus comm...   130   5e-43
gb|AEL98697.1| restriction endonuclease, type II-like protein, p...   133   7e-41
gb|AEL98698.1| restriction endonuclease, type II-like protein, p...   132   9e-41

>ref|XP_002266643.2| PREDICTED: uncharacterized protein LOC100254469 isoform 1 [Vitis
           vinifera] gi|359473704|ref|XP_003631349.1| PREDICTED:
           uncharacterized protein LOC100254469 isoform 2 [Vitis
           vinifera]
          Length = 324

 Score =  142 bits (358), Expect(2) = 2e-45
 Identities = 68/123 (55%), Positives = 84/123 (68%), Gaps = 4/123 (3%)
 Frame = +1

Query: 160 VLEVKCPCNKGKTELGLSWETMPFYYMPQAQGQMEKCDFCSQHENLDREWVDLYCCTPNE 339
           +LEVKCP NKGK E+GL W TMPFYYMPQ QGQME          + REWVDLYC TPN 
Sbjct: 190 ILEVKCPYNKGKPEMGLPWSTMPFYYMPQVQGQMEI---------MGREWVDLYCWTPNG 240

Query: 340 SNIFHVCREREYWELMNMILHQFWWDNVLPARELVYLWGGK----KMQRPICQRPHIGLE 507
           S IFHVCR+R YWEL++ ILH+FWW++V+PARE + L  GK    ++ +P       GL 
Sbjct: 241 STIFHVCRDRSYWELIHGILHEFWWESVVPAREALLL--GKEEEARLYKPASTHKQTGLV 298

Query: 508 MER 516
           + +
Sbjct: 299 ISK 301



 Score = 65.1 bits (157), Expect(2) = 2e-45
 Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 9/61 (14%)
 Frame = +2

Query: 2   WQEKVFAPLGDSIAIAARAAMDWGVL---------KSITGRGVSFLGFAIHAEENFQWLG 154
           W EKVFA    SI  +  +AM+WG+L         KSITGR VS LGFAIH+EE F WLG
Sbjct: 116 WHEKVFASDVQSIEASRNSAMEWGMLNEAAAIEQYKSITGRDVSLLGFAIHSEEQFNWLG 175

Query: 155 A 157
           A
Sbjct: 176 A 176


>ref|XP_002314555.1| predicted protein [Populus trichocarpa] gi|222863595|gb|EEF00726.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  132 bits (333), Expect(3) = 4e-45
 Identities = 58/97 (59%), Positives = 71/97 (73%)
 Frame = +1

Query: 160 VLEVKCPCNKGKTELGLSWETMPFYYMPQAQGQMEKCDFCSQHENLDREWVDLYCCTPNE 339
           +LEVKCP NKGK E GL W TMPFYY+PQ QGQ+E          +DREW DLYC TPN 
Sbjct: 202 ILEVKCPYNKGKPEKGLPWSTMPFYYVPQVQGQLEI---------MDREWADLYCWTPNG 252

Query: 340 SNIFHVCREREYWELMNMILHQFWWDNVLPARELVYL 450
           S IF VCR+R YWE+++ IL +FWW+NV+PARE + +
Sbjct: 253 STIFRVCRDRGYWEIIHGILREFWWENVIPAREALLI 289



 Score = 60.1 bits (144), Expect(3) = 4e-45
 Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
 Frame = +2

Query: 2   WQEKVFAPLGDSIAIAARAAMDWGVL---------KSITGRGVSFLGFAIHAEENFQWLG 154
           W EKVF     ++  +A +AM WGVL         K+IT R VS LGFAIH+EE F WLG
Sbjct: 120 WHEKVFGSETQTLEASANSAMQWGVLNEAAAINRYKNITSREVSSLGFAIHSEEQFDWLG 179

Query: 155 A 157
           A
Sbjct: 180 A 180



 Score = 34.7 bits (78), Expect(3) = 4e-45
 Identities = 13/20 (65%), Positives = 19/20 (95%)
 Frame = +3

Query: 441 SISLGREEDAKAYMPASTHR 500
           ++ +GREE+AK+YMPASTH+
Sbjct: 286 ALLIGREEEAKSYMPASTHK 305


>ref|XP_002514969.1| conserved hypothetical protein [Ricinus communis]
           gi|223546020|gb|EEF47523.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 310

 Score =  130 bits (327), Expect(3) = 5e-43
 Identities = 59/97 (60%), Positives = 70/97 (72%)
 Frame = +1

Query: 160 VLEVKCPCNKGKTELGLSWETMPFYYMPQAQGQMEKCDFCSQHENLDREWVDLYCCTPNE 339
           +LEVKCP NKGK E+GL W TMPFYYMPQ QGQ+E          ++REW DLYC TPN 
Sbjct: 176 ILEVKCPYNKGKPEVGLPWSTMPFYYMPQVQGQLEI---------MNREWADLYCWTPNG 226

Query: 340 SNIFHVCREREYWELMNMILHQFWWDNVLPARELVYL 450
           S IF V R+R YWEL+  IL +FWW+NV+PARE + L
Sbjct: 227 STIFRVYRDRGYWELIQGILQEFWWENVIPAREALLL 263



 Score = 57.0 bits (136), Expect(3) = 5e-43
 Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
 Frame = +2

Query: 2   WQEKVFAPLGDSIAIAARAAMDWGVL---------KSITGRGVSFLGFAIHAEENFQWLG 154
           W EKVFA     I  + RA M+WGVL         KSITGR VS LGFA+H+ E  +WLG
Sbjct: 103 WSEKVFASETQIIGTSKRA-MEWGVLNEAAAVDSYKSITGREVSHLGFAVHSAEQLEWLG 161

Query: 155 A 157
           A
Sbjct: 162 A 162



 Score = 32.7 bits (73), Expect(3) = 5e-43
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +3

Query: 441 SISLGREEDAKAYMPASTHR 500
           ++ LG+EE+AKAY P STHR
Sbjct: 260 ALLLGKEEEAKAYKPTSTHR 279


>gb|AEL98697.1| restriction endonuclease, type II-like protein, partial [Silene
           latifolia]
          Length = 311

 Score =  133 bits (334), Expect(2) = 7e-41
 Identities = 61/99 (61%), Positives = 71/99 (71%)
 Frame = +1

Query: 160 VLEVKCPCNKGKTELGLSWETMPFYYMPQAQGQMEKCDFCSQHENLDREWVDLYCCTPNE 339
           +LEVKCP NKGK  L L W TMPFYYMPQ QGQ+E          +DR+WVDLYC TPN 
Sbjct: 178 ILEVKCPYNKGKPALALPWSTMPFYYMPQVQGQLEI---------MDRDWVDLYCWTPNG 228

Query: 340 SNIFHVCREREYWELMNMILHQFWWDNVLPARELVYLWG 456
           S IF V RER YWELM+ IL +FWW+NV+PARE + + G
Sbjct: 229 STIFRVYRERGYWELMHEILREFWWENVIPAREALLVGG 267



 Score = 59.3 bits (142), Expect(2) = 7e-41
 Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
 Frame = +2

Query: 2   WQEKVFAPLGDSIAIAARAAMDWGVL---------KSITGRGVSFLGFAIHAEENFQWLG 154
           W EKVF         ++  AM+WGVL         KSITGR VSFLGFA+H+E+ F WLG
Sbjct: 104 WSEKVFPLDPKPPEASSMRAMEWGVLNEAVAIEKYKSITGRDVSFLGFAVHSEQKFDWLG 163

Query: 155 A 157
           A
Sbjct: 164 A 164


>gb|AEL98698.1| restriction endonuclease, type II-like protein, partial [Silene
           latifolia]
          Length = 311

 Score =  132 bits (333), Expect(2) = 9e-41
 Identities = 61/99 (61%), Positives = 71/99 (71%)
 Frame = +1

Query: 160 VLEVKCPCNKGKTELGLSWETMPFYYMPQAQGQMEKCDFCSQHENLDREWVDLYCCTPNE 339
           +LEVKCP NKGK  L L W TMPFYYMPQ QGQ+E          +DR+WVDLYC TPN 
Sbjct: 178 ILEVKCPYNKGKPALALPWSTMPFYYMPQVQGQLEI---------MDRDWVDLYCWTPNG 228

Query: 340 SNIFHVCREREYWELMNMILHQFWWDNVLPARELVYLWG 456
           S IF V RER YWELM+ IL +FWW+NV+PARE + + G
Sbjct: 229 STIFRVHRERGYWELMHEILREFWWENVIPAREALLVGG 267



 Score = 59.3 bits (142), Expect(2) = 9e-41
 Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
 Frame = +2

Query: 2   WQEKVFAPLGDSIAIAARAAMDWGVL---------KSITGRGVSFLGFAIHAEENFQWLG 154
           W EKVF         ++  AM+WGVL         KSITGR VSFLGFA+H+E+ F WLG
Sbjct: 104 WSEKVFPLDPKPPEASSMRAMEWGVLNEAVAIEKYKSITGRDVSFLGFAVHSEQKFDWLG 163

Query: 155 A 157
           A
Sbjct: 164 A 164


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