BLASTX nr result
ID: Coptis24_contig00010137
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010137
(517 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266643.2| PREDICTED: uncharacterized protein LOC100254... 142 2e-45
ref|XP_002314555.1| predicted protein [Populus trichocarpa] gi|2... 132 4e-45
ref|XP_002514969.1| conserved hypothetical protein [Ricinus comm... 130 5e-43
gb|AEL98697.1| restriction endonuclease, type II-like protein, p... 133 7e-41
gb|AEL98698.1| restriction endonuclease, type II-like protein, p... 132 9e-41
>ref|XP_002266643.2| PREDICTED: uncharacterized protein LOC100254469 isoform 1 [Vitis
vinifera] gi|359473704|ref|XP_003631349.1| PREDICTED:
uncharacterized protein LOC100254469 isoform 2 [Vitis
vinifera]
Length = 324
Score = 142 bits (358), Expect(2) = 2e-45
Identities = 68/123 (55%), Positives = 84/123 (68%), Gaps = 4/123 (3%)
Frame = +1
Query: 160 VLEVKCPCNKGKTELGLSWETMPFYYMPQAQGQMEKCDFCSQHENLDREWVDLYCCTPNE 339
+LEVKCP NKGK E+GL W TMPFYYMPQ QGQME + REWVDLYC TPN
Sbjct: 190 ILEVKCPYNKGKPEMGLPWSTMPFYYMPQVQGQMEI---------MGREWVDLYCWTPNG 240
Query: 340 SNIFHVCREREYWELMNMILHQFWWDNVLPARELVYLWGGK----KMQRPICQRPHIGLE 507
S IFHVCR+R YWEL++ ILH+FWW++V+PARE + L GK ++ +P GL
Sbjct: 241 STIFHVCRDRSYWELIHGILHEFWWESVVPAREALLL--GKEEEARLYKPASTHKQTGLV 298
Query: 508 MER 516
+ +
Sbjct: 299 ISK 301
Score = 65.1 bits (157), Expect(2) = 2e-45
Identities = 34/61 (55%), Positives = 39/61 (63%), Gaps = 9/61 (14%)
Frame = +2
Query: 2 WQEKVFAPLGDSIAIAARAAMDWGVL---------KSITGRGVSFLGFAIHAEENFQWLG 154
W EKVFA SI + +AM+WG+L KSITGR VS LGFAIH+EE F WLG
Sbjct: 116 WHEKVFASDVQSIEASRNSAMEWGMLNEAAAIEQYKSITGRDVSLLGFAIHSEEQFNWLG 175
Query: 155 A 157
A
Sbjct: 176 A 176
>ref|XP_002314555.1| predicted protein [Populus trichocarpa] gi|222863595|gb|EEF00726.1|
predicted protein [Populus trichocarpa]
Length = 335
Score = 132 bits (333), Expect(3) = 4e-45
Identities = 58/97 (59%), Positives = 71/97 (73%)
Frame = +1
Query: 160 VLEVKCPCNKGKTELGLSWETMPFYYMPQAQGQMEKCDFCSQHENLDREWVDLYCCTPNE 339
+LEVKCP NKGK E GL W TMPFYY+PQ QGQ+E +DREW DLYC TPN
Sbjct: 202 ILEVKCPYNKGKPEKGLPWSTMPFYYVPQVQGQLEI---------MDREWADLYCWTPNG 252
Query: 340 SNIFHVCREREYWELMNMILHQFWWDNVLPARELVYL 450
S IF VCR+R YWE+++ IL +FWW+NV+PARE + +
Sbjct: 253 STIFRVCRDRGYWEIIHGILREFWWENVIPAREALLI 289
Score = 60.1 bits (144), Expect(3) = 4e-45
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Frame = +2
Query: 2 WQEKVFAPLGDSIAIAARAAMDWGVL---------KSITGRGVSFLGFAIHAEENFQWLG 154
W EKVF ++ +A +AM WGVL K+IT R VS LGFAIH+EE F WLG
Sbjct: 120 WHEKVFGSETQTLEASANSAMQWGVLNEAAAINRYKNITSREVSSLGFAIHSEEQFDWLG 179
Query: 155 A 157
A
Sbjct: 180 A 180
Score = 34.7 bits (78), Expect(3) = 4e-45
Identities = 13/20 (65%), Positives = 19/20 (95%)
Frame = +3
Query: 441 SISLGREEDAKAYMPASTHR 500
++ +GREE+AK+YMPASTH+
Sbjct: 286 ALLIGREEEAKSYMPASTHK 305
>ref|XP_002514969.1| conserved hypothetical protein [Ricinus communis]
gi|223546020|gb|EEF47523.1| conserved hypothetical
protein [Ricinus communis]
Length = 310
Score = 130 bits (327), Expect(3) = 5e-43
Identities = 59/97 (60%), Positives = 70/97 (72%)
Frame = +1
Query: 160 VLEVKCPCNKGKTELGLSWETMPFYYMPQAQGQMEKCDFCSQHENLDREWVDLYCCTPNE 339
+LEVKCP NKGK E+GL W TMPFYYMPQ QGQ+E ++REW DLYC TPN
Sbjct: 176 ILEVKCPYNKGKPEVGLPWSTMPFYYMPQVQGQLEI---------MNREWADLYCWTPNG 226
Query: 340 SNIFHVCREREYWELMNMILHQFWWDNVLPARELVYL 450
S IF V R+R YWEL+ IL +FWW+NV+PARE + L
Sbjct: 227 STIFRVYRDRGYWELIQGILQEFWWENVIPAREALLL 263
Score = 57.0 bits (136), Expect(3) = 5e-43
Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Frame = +2
Query: 2 WQEKVFAPLGDSIAIAARAAMDWGVL---------KSITGRGVSFLGFAIHAEENFQWLG 154
W EKVFA I + RA M+WGVL KSITGR VS LGFA+H+ E +WLG
Sbjct: 103 WSEKVFASETQIIGTSKRA-MEWGVLNEAAAVDSYKSITGREVSHLGFAVHSAEQLEWLG 161
Query: 155 A 157
A
Sbjct: 162 A 162
Score = 32.7 bits (73), Expect(3) = 5e-43
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 441 SISLGREEDAKAYMPASTHR 500
++ LG+EE+AKAY P STHR
Sbjct: 260 ALLLGKEEEAKAYKPTSTHR 279
>gb|AEL98697.1| restriction endonuclease, type II-like protein, partial [Silene
latifolia]
Length = 311
Score = 133 bits (334), Expect(2) = 7e-41
Identities = 61/99 (61%), Positives = 71/99 (71%)
Frame = +1
Query: 160 VLEVKCPCNKGKTELGLSWETMPFYYMPQAQGQMEKCDFCSQHENLDREWVDLYCCTPNE 339
+LEVKCP NKGK L L W TMPFYYMPQ QGQ+E +DR+WVDLYC TPN
Sbjct: 178 ILEVKCPYNKGKPALALPWSTMPFYYMPQVQGQLEI---------MDRDWVDLYCWTPNG 228
Query: 340 SNIFHVCREREYWELMNMILHQFWWDNVLPARELVYLWG 456
S IF V RER YWELM+ IL +FWW+NV+PARE + + G
Sbjct: 229 STIFRVYRERGYWELMHEILREFWWENVIPAREALLVGG 267
Score = 59.3 bits (142), Expect(2) = 7e-41
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Frame = +2
Query: 2 WQEKVFAPLGDSIAIAARAAMDWGVL---------KSITGRGVSFLGFAIHAEENFQWLG 154
W EKVF ++ AM+WGVL KSITGR VSFLGFA+H+E+ F WLG
Sbjct: 104 WSEKVFPLDPKPPEASSMRAMEWGVLNEAVAIEKYKSITGRDVSFLGFAVHSEQKFDWLG 163
Query: 155 A 157
A
Sbjct: 164 A 164
>gb|AEL98698.1| restriction endonuclease, type II-like protein, partial [Silene
latifolia]
Length = 311
Score = 132 bits (333), Expect(2) = 9e-41
Identities = 61/99 (61%), Positives = 71/99 (71%)
Frame = +1
Query: 160 VLEVKCPCNKGKTELGLSWETMPFYYMPQAQGQMEKCDFCSQHENLDREWVDLYCCTPNE 339
+LEVKCP NKGK L L W TMPFYYMPQ QGQ+E +DR+WVDLYC TPN
Sbjct: 178 ILEVKCPYNKGKPALALPWSTMPFYYMPQVQGQLEI---------MDRDWVDLYCWTPNG 228
Query: 340 SNIFHVCREREYWELMNMILHQFWWDNVLPARELVYLWG 456
S IF V RER YWELM+ IL +FWW+NV+PARE + + G
Sbjct: 229 STIFRVHRERGYWELMHEILREFWWENVIPAREALLVGG 267
Score = 59.3 bits (142), Expect(2) = 9e-41
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Frame = +2
Query: 2 WQEKVFAPLGDSIAIAARAAMDWGVL---------KSITGRGVSFLGFAIHAEENFQWLG 154
W EKVF ++ AM+WGVL KSITGR VSFLGFA+H+E+ F WLG
Sbjct: 104 WSEKVFPLDPKPPEASSMRAMEWGVLNEAVAIEKYKSITGRDVSFLGFAVHSEQKFDWLG 163
Query: 155 A 157
A
Sbjct: 164 A 164