BLASTX nr result

ID: Coptis24_contig00010130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010130
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522969.1| PREDICTED: 5-methyltetrahydropteroyltrigluta...   202   2e-50
gb|AEO86798.1| methionine synthase [Camellia sinensis]                202   3e-50
dbj|BAE07181.1| methionine synthase [Beta vulgaris]                   201   5e-50
ref|XP_002319710.1| vitamin-b12 independent methionine synthase,...   201   7e-50
ref|XP_002276438.1| PREDICTED: 5-methyltetrahydropteroyltrigluta...   200   9e-50

>ref|XP_003522969.1| PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase-like [Glycine max]
          Length = 799

 Score =  202 bits (514), Expect = 2e-50
 Identities = 96/119 (80%), Positives = 106/119 (89%)
 Frame = -3

Query: 357 VRYKCIRAMTSHIVGYPRMGPKREVKFSLESFWDKRTNADELQKVAKDLRVSIWKQMSGA 178
           VR    RAM SHIVGYPRMGPKRE+KF+LESFWD +++AD+LQKVA DLR +IWKQM+ A
Sbjct: 31  VRATSSRAMASHIVGYPRMGPKRELKFALESFWDGKSSADDLQKVAADLRSAIWKQMADA 90

Query: 177 GIKYIPSNTFSYYDQVLDTTAMLGAVPPRYGWTGGEIGFDVYFSMARGNDTLPAMEMTK 1
           GIKYIPSNTFSYYDQVLDTTAMLGAVP RY W GGEIGFDVYFSMARGN ++PAMEMTK
Sbjct: 91  GIKYIPSNTFSYYDQVLDTTAMLGAVPSRYNWNGGEIGFDVYFSMARGNSSVPAMEMTK 149


>gb|AEO86798.1| methionine synthase [Camellia sinensis]
          Length = 765

 Score =  202 bits (513), Expect = 3e-50
 Identities = 93/111 (83%), Positives = 104/111 (93%)
 Frame = -3

Query: 333 MTSHIVGYPRMGPKREVKFSLESFWDKRTNADELQKVAKDLRVSIWKQMSGAGIKYIPSN 154
           M SHIVGYPRMGPKRE+KF+LESFWDK+++A++L+KVA DLR SIWKQM+ AGIKYIPSN
Sbjct: 1   MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLKKVAADLRSSIWKQMASAGIKYIPSN 60

Query: 153 TFSYYDQVLDTTAMLGAVPPRYGWTGGEIGFDVYFSMARGNDTLPAMEMTK 1
           TFSYYDQVLDTTAMLGAVPPRYGWTGGEIGFD YFSMARGN ++PAMEM K
Sbjct: 61  TFSYYDQVLDTTAMLGAVPPRYGWTGGEIGFDTYFSMARGNASVPAMEMAK 111


>dbj|BAE07181.1| methionine synthase [Beta vulgaris]
          Length = 794

 Score =  201 bits (511), Expect = 5e-50
 Identities = 94/111 (84%), Positives = 104/111 (93%)
 Frame = -3

Query: 333 MTSHIVGYPRMGPKREVKFSLESFWDKRTNADELQKVAKDLRVSIWKQMSGAGIKYIPSN 154
           M SHIVGYPRMGPKRE+KF+LESFWD +++AD+L+KV+ DLR SIWKQMS AGIKYIPSN
Sbjct: 10  MASHIVGYPRMGPKRELKFALESFWDGKSSADDLKKVSADLRSSIWKQMSDAGIKYIPSN 69

Query: 153 TFSYYDQVLDTTAMLGAVPPRYGWTGGEIGFDVYFSMARGNDTLPAMEMTK 1
           TF+YYDQVLDTTAMLGAVPPRYGWTGGEI FDVYFSMARGN T+PAMEMTK
Sbjct: 70  TFAYYDQVLDTTAMLGAVPPRYGWTGGEIEFDVYFSMARGNATVPAMEMTK 120


>ref|XP_002319710.1| vitamin-b12 independent methionine synthase,
           5-methyltetrahydropteroyltriglutamate-homocysteine
           [Populus trichocarpa] gi|222858086|gb|EEE95633.1|
           vitamin-b12 independent methionine synthase,
           5-methyltetrahydropteroyltriglutamate-homocysteine
           [Populus trichocarpa]
          Length = 765

 Score =  201 bits (510), Expect = 7e-50
 Identities = 93/111 (83%), Positives = 104/111 (93%)
 Frame = -3

Query: 333 MTSHIVGYPRMGPKREVKFSLESFWDKRTNADELQKVAKDLRVSIWKQMSGAGIKYIPSN 154
           M SHIVGYPRMGPKRE+KF+LESFWD +++A++LQKVA DLR SIWKQM+ AGIKYIPSN
Sbjct: 1   MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVAADLRESIWKQMTDAGIKYIPSN 60

Query: 153 TFSYYDQVLDTTAMLGAVPPRYGWTGGEIGFDVYFSMARGNDTLPAMEMTK 1
           TFSYYDQ+LDTTAMLGAVPPRYGW GGEIGFDVYFSMARGN ++PAMEMTK
Sbjct: 61  TFSYYDQMLDTTAMLGAVPPRYGWNGGEIGFDVYFSMARGNASVPAMEMTK 111


>ref|XP_002276438.1| PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase [Vitis vinifera]
          Length = 765

 Score =  200 bits (509), Expect = 9e-50
 Identities = 93/111 (83%), Positives = 103/111 (92%)
 Frame = -3

Query: 333 MTSHIVGYPRMGPKREVKFSLESFWDKRTNADELQKVAKDLRVSIWKQMSGAGIKYIPSN 154
           M SHIVGYPRMGPKRE+KF+LESFWDK+++A++LQKVA DLR SIWKQM+ AG KYIPSN
Sbjct: 1   MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLQKVAADLRASIWKQMADAGTKYIPSN 60

Query: 153 TFSYYDQVLDTTAMLGAVPPRYGWTGGEIGFDVYFSMARGNDTLPAMEMTK 1
           TFSYYDQVLDTTAMLGAVPPRYGW GGEI FDVYFSMARGN ++PAMEMTK
Sbjct: 61  TFSYYDQVLDTTAMLGAVPPRYGWNGGEIEFDVYFSMARGNASVPAMEMTK 111