BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010126
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein ...   186   5e-45
ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein ...   181   9e-44
ref|XP_002531336.1| RNA binding protein, putative [Ricinus commu...   177   1e-42
ref|XP_003625508.1| RNA binding protein [Medicago truncatula] gi...   173   3e-41
gb|EAY89474.1| hypothetical protein OsI_11005 [Oryza sativa Indi...   172   7e-41

>ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|297741476|emb|CBI32608.3| unnamed protein product
           [Vitis vinifera]
          Length = 140

 Score =  186 bits (471), Expect = 5e-45
 Identities = 88/106 (83%), Positives = 95/106 (89%)
 Frame = +1

Query: 148 KLFISGLARQTTDEKLKEAFSPFGQILEAKVVVDRASGRSKGFAFVSYATIVEAEKAREE 327
           KLF+SGL+R TTDEKLKEAFSPFGQ+LEAKV+ DR SGRSKGF FV+Y T+ EAEKARE 
Sbjct: 35  KLFVSGLSRLTTDEKLKEAFSPFGQLLEAKVITDRVSGRSKGFGFVTYTTLEEAEKAREG 94

Query: 328 MNAKFLDGWVIFVDPAKPREWRSPPKPEPEQSETGFRTNKTIGWCG 465
           MNAKFLDGWVIFVDPAKPRE R PP+ EPE SETGFRTNKTIGWCG
Sbjct: 95  MNAKFLDGWVIFVDPAKPREPRPPPQQEPESSETGFRTNKTIGWCG 140


>ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 146

 Score =  181 bits (460), Expect = 9e-44
 Identities = 97/155 (62%), Positives = 113/155 (72%)
 Frame = +1

Query: 1   MALALTLRRILRNGGXXXXXXXXXVEPKWTRLIPIRLNXXXXXXXXXXXKLFISGLARQT 180
           MA   T+RR+L NG          +  +W     +RL+           KLFISGL+R T
Sbjct: 1   MAFFSTVRRVL-NGSSSSSSSSSILRSQWNA---VRLSSTLTSP-----KLFISGLSRLT 51

Query: 181 TDEKLKEAFSPFGQILEAKVVVDRASGRSKGFAFVSYATIVEAEKAREEMNAKFLDGWVI 360
           TDEKL+EAFS FGQ+++AKVV DRA+GRSKGFAFV+Y+TI EAEKAREEMNAKFLDGWVI
Sbjct: 52  TDEKLREAFSSFGQLVDAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFLDGWVI 111

Query: 361 FVDPAKPREWRSPPKPEPEQSETGFRTNKTIGWCG 465
           FVDPAKPRE R PP+P+ E SE G RTNKTIGWCG
Sbjct: 112 FVDPAKPREPRPPPQPQSETSEFGIRTNKTIGWCG 146


>ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis]
           gi|223529058|gb|EEF31043.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 144

 Score =  177 bits (450), Expect = 1e-42
 Identities = 83/108 (76%), Positives = 97/108 (89%), Gaps = 2/108 (1%)
 Frame = +1

Query: 148 KLFISGLARQTTDEKLKEAFSPFGQILEAKVVVDRASGRSKGFAFVSYATIVEAEKAREE 327
           +LF+SGL+R TTDEKLKEAFSPFGQ+++AKV++DRASGRSKGF F++YATI EAEKARE 
Sbjct: 37  RLFVSGLSRLTTDEKLKEAFSPFGQLVDAKVIIDRASGRSKGFGFITYATIEEAEKAREG 96

Query: 328 MNAKFLDGWVIFVDPAKPREWR--SPPKPEPEQSETGFRTNKTIGWCG 465
           MNAKFLDGWVIFVDPAKPRE R   PP P+PE SETG++ N+TIGWCG
Sbjct: 97  MNAKFLDGWVIFVDPAKPREQRLPPPPPPQPETSETGYKINRTIGWCG 144


>ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
           gi|355500523|gb|AES81726.1| RNA binding protein
           [Medicago truncatula]
          Length = 141

 Score =  173 bits (438), Expect = 3e-41
 Identities = 83/106 (78%), Positives = 92/106 (86%)
 Frame = +1

Query: 148 KLFISGLARQTTDEKLKEAFSPFGQILEAKVVVDRASGRSKGFAFVSYATIVEAEKAREE 327
           KLFISGL+R TTDEKL EAFSPFGQ+LEAKV+ DR SGRSKGFAFVSY+TI EAEKARE 
Sbjct: 36  KLFISGLSRLTTDEKLTEAFSPFGQLLEAKVITDRGSGRSKGFAFVSYSTIEEAEKAREG 95

Query: 328 MNAKFLDGWVIFVDPAKPREWRSPPKPEPEQSETGFRTNKTIGWCG 465
           MNAKFLDGWVIFVDPAKPRE R P + + + S+TGF  NKT+GWCG
Sbjct: 96  MNAKFLDGWVIFVDPAKPREPRPPQQSQSQPSQTGFTVNKTVGWCG 141


>gb|EAY89474.1| hypothetical protein OsI_11005 [Oryza sativa Indica Group]
          Length = 173

 Score =  172 bits (435), Expect = 7e-41
 Identities = 79/106 (74%), Positives = 91/106 (85%)
 Frame = +1

Query: 148 KLFISGLARQTTDEKLKEAFSPFGQILEAKVVVDRASGRSKGFAFVSYATIVEAEKAREE 327
           KLFISGL+R TTDEKLK AF+PFGQ+LEAKV+ DR SGRSKGF FV YAT+ EAE AR+E
Sbjct: 68  KLFISGLSRLTTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAENARQE 127

Query: 328 MNAKFLDGWVIFVDPAKPREWRSPPKPEPEQSETGFRTNKTIGWCG 465
           MNAKFLDGWVIFVDPAKPR+ +  P+P+ + S TGF TNKT+GWCG
Sbjct: 128 MNAKFLDGWVIFVDPAKPRQQKPAPRPDTDSSHTGFTTNKTVGWCG 173