BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010122
         (1549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase A...   259   2e-66
emb|CBI15033.3| unnamed protein product [Vitis vinifera]              259   2e-66
ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ric...   215   2e-53
emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Ara...   177   5e-42
sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kin...   177   5e-42

>ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera]
          Length = 2956

 Score =  259 bits (661), Expect = 2e-66
 Identities = 159/416 (38%), Positives = 228/416 (54%), Gaps = 22/416 (5%)
 Frame = -1

Query: 1204 LNDSVIILLPAAIFSLSVGCAPFPYLIKNLSIANSCFDFSEVVEGGIMAKGNQRFQ-YKL 1028
            LN+ +++LLPA +++L  GC PF    K L I++S     + +E  +     +R   +++
Sbjct: 511  LNERMVVLLPATVYALCTGCVPFTDCYKGLLISHSFLGVPDRIEDWLKTGEYERESLHEV 570

Query: 1027 LECSVELLAEIEKGSDAKAMQSESQHIVRLPCRISDPLRSEMETYILAFLTDNVIDRMLL 848
             ECSVE+LAEI+  S  K  Q +    VRLP ++ DPL +EMET+ILA + +    +MLL
Sbjct: 571  FECSVEVLAEIDLSSSVKVSQPQCHQNVRLPRQLRDPLLNEMETFILATVGEKDSGKMLL 630

Query: 847  SDIFFLCTLICNFIYSSIVTSSKEENSTFHLKLCQHVVMLLQRALCLVEECQNDLQSRGG 668
            SD+FF+C L+ NFIYS+ +T  +EE S F +KL + VV  L RA  +V+E  N +   G 
Sbjct: 631  SDVFFMCALLSNFIYSAFLTRLREELSLFIIKLGKCVVKFLDRAASIVQESHNHIGEHGC 690

Query: 667  SGCNLFLDGTGSILASVRGFVCGRLLSLCRDQTFNHDMLARDIIEAMERFLKALAKLFKG 488
               N   DG   ++AS R  VC  L     DQ    D L   II+ +ER LK LA L+  
Sbjct: 691  LARNSIFDGWDLVIASFRSLVCSPLFIKWGDQIALDDALYSTIIQTIERLLKILANLYGK 750

Query: 487  YSGGRWN-----------------XXXXXXXXXXXXEIDADLDLNKGSNDMD---AKGKC 368
             S    N                              +D +LD+++ S ++D     G  
Sbjct: 751  CSDCIRNLQSEIVPPDLSASDIPVQNPCPVDGSEVRIMDMELDVSEDSKNVDIIAVSGTI 810

Query: 367  ASGIPLSSVKWKFDVISVVASFFVVLPVTTWEIMLDLMENENDIKVCENILCCICEQFQ- 191
            ASGI  S+ KWK D+IS+++SFF VLP  TWEI+ DLM+ E   KVCENIL  +C+    
Sbjct: 811  ASGISFSTGKWKLDMISLISSFFPVLPAVTWEILFDLMKKETHSKVCENILFSLCQHSHW 870

Query: 190  SSPAGLSDLVFLMNDMIEVRMPLNLCSVDILIAIRSLLKALISMRNSERDSNANLS 23
            SS   L+D+V  MN+MI++R+ L L    IL AIR+ L  L+SM  + +D    +S
Sbjct: 871  SSSTRLTDMVISMNNMIDMRVNLKLPCYAILAAIRAFLGTLLSMGTAGKDKYVGMS 926


>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
          Length = 3085

 Score =  259 bits (661), Expect = 2e-66
 Identities = 159/416 (38%), Positives = 228/416 (54%), Gaps = 22/416 (5%)
 Frame = -1

Query: 1204 LNDSVIILLPAAIFSLSVGCAPFPYLIKNLSIANSCFDFSEVVEGGIMAKGNQRFQ-YKL 1028
            LN+ +++LLPA +++L  GC PF    K L I++S     + +E  +     +R   +++
Sbjct: 579  LNERMVVLLPATVYALCTGCVPFTDCYKGLLISHSFLGVPDRIEDWLKTGEYERESLHEV 638

Query: 1027 LECSVELLAEIEKGSDAKAMQSESQHIVRLPCRISDPLRSEMETYILAFLTDNVIDRMLL 848
             ECSVE+LAEI+  S  K  Q +    VRLP ++ DPL +EMET+ILA + +    +MLL
Sbjct: 639  FECSVEVLAEIDLSSSVKVSQPQCHQNVRLPRQLRDPLLNEMETFILATVGEKDSGKMLL 698

Query: 847  SDIFFLCTLICNFIYSSIVTSSKEENSTFHLKLCQHVVMLLQRALCLVEECQNDLQSRGG 668
            SD+FF+C L+ NFIYS+ +T  +EE S F +KL + VV  L RA  +V+E  N +   G 
Sbjct: 699  SDVFFMCALLSNFIYSAFLTRLREELSLFIIKLGKCVVKFLDRAASIVQESHNHIGEHGC 758

Query: 667  SGCNLFLDGTGSILASVRGFVCGRLLSLCRDQTFNHDMLARDIIEAMERFLKALAKLFKG 488
               N   DG   ++AS R  VC  L     DQ    D L   II+ +ER LK LA L+  
Sbjct: 759  LARNSIFDGWDLVIASFRSLVCSPLFIKWGDQIALDDALYSTIIQTIERLLKILANLYGK 818

Query: 487  YSGGRWN-----------------XXXXXXXXXXXXEIDADLDLNKGSNDMD---AKGKC 368
             S    N                              +D +LD+++ S ++D     G  
Sbjct: 819  CSDCIRNLQSEIVPPDLSASDIPVQNPCPVDGSEVRIMDMELDVSEDSKNVDIIAVSGTI 878

Query: 367  ASGIPLSSVKWKFDVISVVASFFVVLPVTTWEIMLDLMENENDIKVCENILCCICEQFQ- 191
            ASGI  S+ KWK D+IS+++SFF VLP  TWEI+ DLM+ E   KVCENIL  +C+    
Sbjct: 879  ASGISFSTGKWKLDMISLISSFFPVLPAVTWEILFDLMKKETHSKVCENILFSLCQHSHW 938

Query: 190  SSPAGLSDLVFLMNDMIEVRMPLNLCSVDILIAIRSLLKALISMRNSERDSNANLS 23
            SS   L+D+V  MN+MI++R+ L L    IL AIR+ L  L+SM  + +D    +S
Sbjct: 939  SSSTRLTDMVISMNNMIDMRVNLKLPCYAILAAIRAFLGTLLSMGTAGKDKYVGMS 994


>ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ricinus communis]
            gi|223550511|gb|EEF51998.1| ataxia telangiectasia
            mutated, putative [Ricinus communis]
          Length = 2954

 Score =  215 bits (548), Expect = 2e-53
 Identities = 140/419 (33%), Positives = 224/419 (53%), Gaps = 25/419 (5%)
 Frame = -1

Query: 1204 LNDSVIILLPAAIFSLSVGCAPFPYLIKNLSIANSCFDFSEVVEGGIMAKGNQ---RFQY 1034
            LN+ +++L PAA+++L  GCAPF +  K L  +++      +   G  AK  +      Y
Sbjct: 517  LNEHMVVLFPAAVYALCAGCAPFTHCYKGLLPSHN------LEASGDWAKTYEDECERLY 570

Query: 1033 KLLECSVELLAEIEKGSDAKAMQSESQHIVRLPCRISDPLRSEMETYILAFLTDNVIDRM 854
            +  ECSVE+LA+I+ GS  +   S+    V LPC + D L  EMET+I   L D   ++M
Sbjct: 571  EPFECSVEVLAKIDLGSTVELASSQCNRSVSLPCELRDTLMHEMETHIFGALGDKQTEKM 630

Query: 853  LLSDIFFLCTLICNFIYSSIVTSSKEENSTFHLKLCQHVVMLLQRALCLVEECQNDLQSR 674
             L D  F C L+ NFI+ S+VT  ++E   F  K  Q+++ LL  A+ LV E  +D QS 
Sbjct: 631  PLCDAIFTCGLLSNFIHGSLVTRKRDEILPFLSKTGQYLIDLLGYAVNLVTENGSDFQSL 690

Query: 673  GGSGCNLFLDGTGSILASVRGFVCGRLLSLCRDQTFNHDMLARDIIEAMERFLKALAKLF 494
            G SG     +   S+L S R  +C  +     D+      L+ D+I+ MER LKALAKL+
Sbjct: 691  GCSGSTSECNVKNSLLQSFRSLLCCPIFVKGEDKNALDAALSGDVIQCMERLLKALAKLY 750

Query: 493  KGY---------------SGGRWNXXXXXXXXXXXXEIDADLDLNKGSNDMDA---KGKC 368
            + +               S                  +D +LD+N+ + D+D     GK 
Sbjct: 751  EQFSECTRSSHSEVVLSDSSDASLQISSPLDGSRSRILDVELDVNEDTQDVDILSFGGKV 810

Query: 367  ASGIPLSSVKWKFDVISVVASFFVVLPVTTWEIMLDLMENENDIKVCENILCCICEQFQS 188
            ++ I  S +KWK  +IS+++SFF VL + TW+I+ ++M  E + KV ENIL  +C+    
Sbjct: 811  STAISFSMIKWKMGMISLISSFFSVLGLVTWDILFEVMGKECETKVFENILYHLCQHPHW 870

Query: 187  SPAG-LSDLVFL---MNDMIEVRMPLNLCSVDILIAIRSLLKALISMRNSERDSNANLS 23
            S AG L DLV +   +++MIE+++   L    I++A + L+  L+S+   ++D++ +L+
Sbjct: 871  SSAGKLIDLVIMVQTLDNMIEIKVGAKLNCASIVVATQRLMHTLLSLNGIQKDADLSLT 929


>emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana]
          Length = 3856

 Score =  177 bits (450), Expect = 5e-42
 Identities = 128/411 (31%), Positives = 211/411 (51%), Gaps = 17/411 (4%)
 Frame = -1

Query: 1204 LNDSVIILLPAAIFSLSVGCAPFPYLIKNLSIANSCFDFSEVVEGGIMAKGNQRFQYKLL 1025
            L++ ++ LLPAA FSL  G      L K      S +D  E ++       ++   + L 
Sbjct: 1389 LDERMVQLLPAAAFSLCAGFKVSLPLPKEHLPTPSQWDVCEQIDDV-----DRERNFGLF 1443

Query: 1024 ECSVELLAEIEKGSDAKAMQSESQHIVRLPCRISDPLRSEMETYILAFLTDNVIDRMLLS 845
            ECSVE L  I   S +K    +   +V+LP  + DPL  +M+ Y L+ + + V ++  LS
Sbjct: 1444 ECSVEALTRICSNS-SKISGCQVPDVVQLPLVLRDPLLHDMDIYFLSIIPE-VKEKGPLS 1501

Query: 844  DIFFLCTLICNFIYSSIVTSSKEENSTFHLKLCQHVVMLLQRALCLVEECQNDLQSRGGS 665
            DIF  C L+C+F++ S +T   + +S+F LK CQ+++  L  A+  V +  NDLQ RG  
Sbjct: 1502 DIFMGCALLCHFMHGSYITRKGKGSSSFFLKACQYLLEGLDHAVESVSKSLNDLQRRGSL 1561

Query: 664  GCNLFLDGTGSILASVRGFVCGRLLSLCRDQTF---NHDMLARDIIEAMERFLKALAKLF 494
            G     +  GSI+ S+R F    + S  RDQ     ++D     +I ++E  L++ AK++
Sbjct: 1562 GFGSDFNEKGSIIVSLRSFTQSPVFSNRRDQNLLGASYDF----VIHSLENLLRSFAKVY 1617

Query: 493  KGYSGGRWN--------XXXXXXXXXXXXEIDADLDLNKGSNDMD---AKGKCASGIPLS 347
            + Y+   WN                     +D DLDL + + + D   A GK   G+P+S
Sbjct: 1618 EEYTEHAWNTHSDTVPSKSLAPDSPEVGRIVDMDLDLAEDTKERDIIAAGGKAVPGLPVS 1677

Query: 346  SVKWKFDVISVVASFFVVLPVTTWEIMLDLMENENDIKVCENILCCICE-QFQSSPAGLS 170
               WK  ++S+++ F  VL   TW+++ +L+E E+D KV ENIL  +C+    +S   + 
Sbjct: 1678 MGNWKLGMVSLISCFSPVLQFPTWDVLYNLLEKESDPKVLENILYHLCKLSCLTSIPKVD 1737

Query: 169  DLVFLMNDMIEVRMPLNLCSVDILIAIRSLLKALISMR--NSERDSNANLS 23
            DLV  ++ M+  ++ +    ++I+ A+  LL  L S R  +S  + N  LS
Sbjct: 1738 DLVIFLDGMLSTQVKMKRNCLNIVTALHVLLHTLSSSRRDSSGVEKNCGLS 1788


>sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kinase ATM; AltName:
            Full=Ataxia telangiectasia mutated homolog; Short=AtATM
            gi|7960715|emb|CAB92122.1| AtATM [Arabidopsis thaliana]
          Length = 3856

 Score =  177 bits (450), Expect = 5e-42
 Identities = 128/411 (31%), Positives = 211/411 (51%), Gaps = 17/411 (4%)
 Frame = -1

Query: 1204 LNDSVIILLPAAIFSLSVGCAPFPYLIKNLSIANSCFDFSEVVEGGIMAKGNQRFQYKLL 1025
            L++ ++ LLPAA FSL  G      L K      S +D  E ++       ++   + L 
Sbjct: 1389 LDERMVQLLPAAAFSLCAGFKVSLPLPKEHLPTPSQWDVCEQIDDV-----DRERNFGLF 1443

Query: 1024 ECSVELLAEIEKGSDAKAMQSESQHIVRLPCRISDPLRSEMETYILAFLTDNVIDRMLLS 845
            ECSVE L  I   S +K    +   +V+LP  + DPL  +M+ Y L+ + + V ++  LS
Sbjct: 1444 ECSVEALTRICSNS-SKISGCQVPDVVQLPLVLRDPLLHDMDIYFLSIIPE-VKEKGPLS 1501

Query: 844  DIFFLCTLICNFIYSSIVTSSKEENSTFHLKLCQHVVMLLQRALCLVEECQNDLQSRGGS 665
            DIF  C L+C+F++ S +T   + +S+F LK CQ+++  L  A+  V +  NDLQ RG  
Sbjct: 1502 DIFMGCALLCHFMHGSYITRKGKGSSSFFLKACQYLLEGLDHAVESVSKSLNDLQRRGSL 1561

Query: 664  GCNLFLDGTGSILASVRGFVCGRLLSLCRDQTF---NHDMLARDIIEAMERFLKALAKLF 494
            G     +  GSI+ S+R F    + S  RDQ     ++D     +I ++E  L++ AK++
Sbjct: 1562 GFGSDFNEKGSIIVSLRSFTQSPVFSNRRDQNLLGASYDF----VIHSLENLLRSFAKVY 1617

Query: 493  KGYSGGRWN--------XXXXXXXXXXXXEIDADLDLNKGSNDMD---AKGKCASGIPLS 347
            + Y+   WN                     +D DLDL + + + D   A GK   G+P+S
Sbjct: 1618 EEYTEHAWNTHSDTVPSKSLAPDSPEVGRIVDMDLDLAEDTKERDIIAAGGKAVPGLPVS 1677

Query: 346  SVKWKFDVISVVASFFVVLPVTTWEIMLDLMENENDIKVCENILCCICE-QFQSSPAGLS 170
               WK  ++S+++ F  VL   TW+++ +L+E E+D KV ENIL  +C+    +S   + 
Sbjct: 1678 MGNWKLGMVSLISCFSPVLQFPTWDVLYNLLEKESDPKVLENILYHLCKLSCLTSIPKVD 1737

Query: 169  DLVFLMNDMIEVRMPLNLCSVDILIAIRSLLKALISMR--NSERDSNANLS 23
            DLV  ++ M+  ++ +    ++I+ A+  LL  L S R  +S  + N  LS
Sbjct: 1738 DLVIFLDGMLSTQVKMKRNCLNIVTALHVLLHTLSSSRRDSSGVEKNCGLS 1788