BLASTX nr result
ID: Coptis24_contig00010121
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010121 (1038 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003599918.1| Elongin-A [Medicago truncatula] gi|355488966... 220 4e-55 ref|XP_002317925.1| predicted protein [Populus trichocarpa] gi|1... 217 3e-54 ref|XP_002282527.1| PREDICTED: uncharacterized protein LOC100252... 211 2e-52 gb|ACU16340.1| unknown [Glycine max] 209 7e-52 gb|AFK36819.1| unknown [Lotus japonicus] 198 2e-48 >ref|XP_003599918.1| Elongin-A [Medicago truncatula] gi|355488966|gb|AES70169.1| Elongin-A [Medicago truncatula] Length = 232 Score = 220 bits (561), Expect = 4e-55 Identities = 106/195 (54%), Positives = 139/195 (71%) Frame = -3 Query: 853 KKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQGRDLSPVT 674 +K PSLV LCVQTAIDN+RYLGN+G D LLE IL HCTLDQL IE +++G DLSPVT Sbjct: 10 RKTPSLVDLCVQTAIDNLRYLGNVGPVDHHLLERILPHCTLDQLTHIEKASEGMDLSPVT 69 Query: 673 DKLWKKFYKKEFGVDCLNTLVEKMNKRKVSFKWRELFEAKTKAVEEASMXXXXXXXXXXX 494 DKLWKKF++K+FG+ C N ++ +M +++VSF+W +L+EAK K V +A Sbjct: 70 DKLWKKFFEKQFGISCTNEIIRRMTEKRVSFRWLQLYEAKGKEVAQAENEAIDRLRERYK 129 Query: 493 XXXXRKQSRQTRICTKLPPSSSKRNFWGSSGPGTNFSNAKGSLMKKARMEYLNSHEAKVH 314 +KQSRQ + CTKLPP SSKR FWG +GPG N SN K ++MKK+++E+L S E K Sbjct: 130 NADAKKQSRQVKTCTKLPP-SSKRRFWGDNGPGYNVSNVKSNIMKKSKIEFLKSREVKNI 188 Query: 313 ATIRKNAVQRSQSQS 269 A ++KN++ RS S S Sbjct: 189 AAMKKNSIPRSSSSS 203 >ref|XP_002317925.1| predicted protein [Populus trichocarpa] gi|118481523|gb|ABK92704.1| unknown [Populus trichocarpa] gi|222858598|gb|EEE96145.1| predicted protein [Populus trichocarpa] Length = 227 Score = 217 bits (553), Expect = 3e-54 Identities = 111/213 (52%), Positives = 149/213 (69%), Gaps = 1/213 (0%) Frame = -3 Query: 856 KKKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQGRDLSPV 677 K+K PSLV LCV A++NV+YLG++G+TD+ LL+ IL HCTLDQL IE ST GRDLS V Sbjct: 5 KRKVPSLVDLCVSLAVENVKYLGDVGETDLHLLDRILPHCTLDQLMHIEKSTVGRDLSSV 64 Query: 676 TDKLWKKFYKKEFGVDCLNTLVEKMNKRKVSFKWRELFEAKTKAVEEASMXXXXXXXXXX 497 TDKLWK FY+K+FG + ++++M ++KVSF+W +L+EAK K + EA Sbjct: 65 TDKLWKTFYEKQFGERSTDLVIQRMRQKKVSFRWLQLYEAKLKDIAEAENKLAARIRQLY 124 Query: 496 XXXXXRKQSRQTRICTKLPPSSSKRNFWGSSGPGTNFSNAKGSLMKKARMEYLNSHEAKV 317 RKQSRQ R+C+K+PPSS+KR+F G SGPG N SN K +LMKKA+M++L S E + Sbjct: 125 KKEDDRKQSRQVRLCSKVPPSSNKRSFCGGSGPGYNLSNGKSNLMKKAKMDFLKSREVQN 184 Query: 316 HATIRKNAVQR-SQSQSIRRPTKPAGLLGKHTA 221 A ++KNA+QR S S S+ +P P GK +A Sbjct: 185 IAAMKKNALQRNSSSSSMMKP--PGSFPGKSSA 215 >ref|XP_002282527.1| PREDICTED: uncharacterized protein LOC100252279 [Vitis vinifera] gi|302143487|emb|CBI22048.3| unnamed protein product [Vitis vinifera] Length = 223 Score = 211 bits (538), Expect = 2e-52 Identities = 118/214 (55%), Positives = 146/214 (68%) Frame = -3 Query: 862 MYKKKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQGRDLS 683 M K+K PSLV LC++TAIDNVRYLG++G+TDI+LL+ IL HCT+DQL IE T+ RDLS Sbjct: 4 MVKRKVPSLVDLCIRTAIDNVRYLGDVGETDINLLDHILPHCTVDQLMHIEKCTEERDLS 63 Query: 682 PVTDKLWKKFYKKEFGVDCLNTLVEKMNKRKVSFKWRELFEAKTKAVEEASMXXXXXXXX 503 VTDKLWKKFY+KEFGV N +VE+M +KVSFKW +L+EAK K +EA Sbjct: 64 EVTDKLWKKFYEKEFGVKSTNLVVERMKLKKVSFKWSKLYEAKLKDRDEAQKKSFDRIKQ 123 Query: 502 XXXXXXXRKQSRQTRICTKLPPSSSKRNFWGSSGPGTNFSNAKGSLMKKARMEYLNSHEA 323 RKQSRQ +ICTK+PPSS+KR F+G GPGT SN K +LMKKA++E LNS E Sbjct: 124 LYQKEDARKQSRQVKICTKVPPSSNKRCFYG--GPGT--SNLKSNLMKKAKVECLNSPEV 179 Query: 322 KVHATIRKNAVQRSQSQSIRRPTKPAGLLGKHTA 221 K A ++K A+ QS+ I K GK A Sbjct: 180 KNLAAMKKQAL---QSRCIAPARKLGSFSGKDCA 210 >gb|ACU16340.1| unknown [Glycine max] Length = 230 Score = 209 bits (533), Expect = 7e-52 Identities = 104/199 (52%), Positives = 136/199 (68%) Frame = -3 Query: 850 KPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQGRDLSPVTD 671 + PSLV LCVQ IDNVRYLGN+G D LLE IL HCT DQL +E ST+GR+ SPVTD Sbjct: 13 RTPSLVDLCVQKVIDNVRYLGNVGSLDQHLLEQILPHCTADQLMHVEKSTKGRNPSPVTD 72 Query: 670 KLWKKFYKKEFGVDCLNTLVEKMNKRKVSFKWRELFEAKTKAVEEASMXXXXXXXXXXXX 491 KLWKKFY+K+FG + N ++++M K++V+F+W +L+EAK K +A Sbjct: 73 KLWKKFYEKQFGTNNTNEVIKRMKKKRVNFRWMQLYEAKGKERAQAENEALDRIRQLYKK 132 Query: 490 XXXRKQSRQTRICTKLPPSSSKRNFWGSSGPGTNFSNAKGSLMKKARMEYLNSHEAKVHA 311 RKQSRQ R CTK+PP SSKR FWG +GPG N SN K ++MKKA++E+L SHE K A Sbjct: 133 EDARKQSRQVRTCTKVPP-SSKRRFWGDNGPGYNVSNVKSNIMKKAKIEFLKSHEVKNLA 191 Query: 310 TIRKNAVQRSQSQSIRRPT 254 ++ ++QR+ S S + T Sbjct: 192 AMKNKSIQRNPSSSSFKKT 210 >gb|AFK36819.1| unknown [Lotus japonicus] Length = 222 Score = 198 bits (504), Expect = 2e-48 Identities = 101/201 (50%), Positives = 135/201 (67%) Frame = -3 Query: 871 KDPMYKKKPPSLVQLCVQTAIDNVRYLGNIGDTDIDLLEDILSHCTLDQLKCIEDSTQGR 692 +D + +K PSLV LCV+ IDN+RYLGN+G D LLE IL HCTL+QL +E ++ G Sbjct: 4 RDQVPVRKLPSLVDLCVEKVIDNLRYLGNVGSVDHHLLERILPHCTLEQLMHVEKASVGC 63 Query: 691 DLSPVTDKLWKKFYKKEFGVDCLNTLVEKMNKRKVSFKWRELFEAKTKAVEEASMXXXXX 512 DLSPVTDKLWKKF++K+FG N ++++M ++KVSFKW +L+EAK K + EA Sbjct: 64 DLSPVTDKLWKKFFEKQFGTHSTNEVIKRMREKKVSFKWMQLYEAKVKEIAEAENEAVAR 123 Query: 511 XXXXXXXXXXRKQSRQTRICTKLPPSSSKRNFWGSSGPGTNFSNAKGSLMKKARMEYLNS 332 RKQSRQ ++CTK PPSS KR FWG + G N SN K ++MKK+R+E L S Sbjct: 124 IKQRYQKEDARKQSRQVQLCTKTPPSSKKR-FWGDN--GYNVSNLKSNIMKKSRIELLKS 180 Query: 331 HEAKVHATIRKNAVQRSQSQS 269 HE K A ++ ++QR+ S S Sbjct: 181 HEVKNLAAMKNKSIQRNNSPS 201