BLASTX nr result

ID: Coptis24_contig00010117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010117
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282726.1| PREDICTED: uncharacterized protein LOC100243...    85   5e-15
ref|XP_002520502.1| conserved hypothetical protein [Ricinus comm...    80   1e-13
ref|XP_002299845.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|NP_200729.3| myosin heavy chain-related protein [Arabidopsis...    80   2e-13
ref|NP_851219.1| myosin heavy chain-related protein [Arabidopsis...    80   2e-13

>ref|XP_002282726.1| PREDICTED: uncharacterized protein LOC100243231 [Vitis vinifera]
           gi|297745999|emb|CBI16055.3| unnamed protein product
           [Vitis vinifera]
          Length = 447

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 54/122 (44%), Positives = 65/122 (53%)
 Frame = +3

Query: 3   HATLGRRTLEEIRQKRAAERLSKASSGPDLQSSSNPLPSLGINRSQXXXXXXXXXXXXXX 182
           HATLGRRTLEEIRQKRAAERL KA+SGPDL    NP  ++GI +S               
Sbjct: 5   HATLGRRTLEEIRQKRAAERLVKAASGPDLSQVLNPNDNMGIKQSD-------------- 50

Query: 183 XXXXXXXXXXXXXXXXSGGQLSESDISGLVSQIKIXXXXXXXXXXXXKTVISKLQAKEIE 362
                           S  +LSE+D+S LVSQ+K             K + S+LQAKE+E
Sbjct: 51  ----------------SSNRLSENDVSDLVSQLKGLHKRNAELEEDNKKLNSRLQAKEVE 94

Query: 363 ND 368
           ND
Sbjct: 95  ND 96


>ref|XP_002520502.1| conserved hypothetical protein [Ricinus communis]
           gi|223540344|gb|EEF41915.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 450

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 50/122 (40%), Positives = 64/122 (52%)
 Frame = +3

Query: 3   HATLGRRTLEEIRQKRAAERLSKASSGPDLQSSSNPLPSLGINRSQXXXXXXXXXXXXXX 182
           HA+LGRRTLEEIRQKRAAERLSK  SGPDL  +S    + G+ +S+              
Sbjct: 6   HASLGRRTLEEIRQKRAAERLSKTYSGPDLSKASVSNDNAGMKKSE-------------- 51

Query: 183 XXXXXXXXXXXXXXXXSGGQLSESDISGLVSQIKIXXXXXXXXXXXXKTVISKLQAKEIE 362
                           SG +LSE+D+SGLVSQ+K             K +  K+Q K++E
Sbjct: 52  ----------------SGNRLSETDVSGLVSQLKDLQKKNADLEESNKMLSMKIQTKDVE 95

Query: 363 ND 368
           ND
Sbjct: 96  ND 97


>ref|XP_002299845.1| predicted protein [Populus trichocarpa] gi|222847103|gb|EEE84650.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 51/122 (41%), Positives = 63/122 (51%)
 Frame = +3

Query: 3   HATLGRRTLEEIRQKRAAERLSKASSGPDLQSSSNPLPSLGINRSQXXXXXXXXXXXXXX 182
           HA+LGRRTLEEIRQKRAAERLSKASSGPDL     P  + G+ +S+              
Sbjct: 5   HASLGRRTLEEIRQKRAAERLSKASSGPDLTKIPTPNDNAGMRKSE-------------- 50

Query: 183 XXXXXXXXXXXXXXXXSGGQLSESDISGLVSQIKIXXXXXXXXXXXXKTVISKLQAKEIE 362
                           SG +LSE+DI GLVSQ+K               +  KLQ K++E
Sbjct: 51  ----------------SGNRLSETDIGGLVSQLKDLQKRNADLEESNGILSLKLQTKDVE 94

Query: 363 ND 368
           N+
Sbjct: 95  NE 96


>ref|NP_200729.3| myosin heavy chain-related protein [Arabidopsis thaliana]
           gi|332009775|gb|AED97158.1| myosin heavy chain-related
           protein [Arabidopsis thaliana]
          Length = 433

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 51/122 (41%), Positives = 62/122 (50%)
 Frame = +3

Query: 3   HATLGRRTLEEIRQKRAAERLSKASSGPDLQSSSNPLPSLGINRSQXXXXXXXXXXXXXX 182
           HA+LGRRTLEEIRQKRAA+RLSKASSGPDL    NP     I +S+              
Sbjct: 5   HASLGRRTLEEIRQKRAAQRLSKASSGPDLSEIPNPADFPVIRKSE-------------- 50

Query: 183 XXXXXXXXXXXXXXXXSGGQLSESDISGLVSQIKIXXXXXXXXXXXXKTVISKLQAKEIE 362
                           SG +LSE+D+  L SQ+K             K + SKLQ KE+E
Sbjct: 51  ----------------SGNRLSETDVGALYSQLKELQKKNAEMEERNKILSSKLQTKEVE 94

Query: 363 ND 368
           N+
Sbjct: 95  NE 96


>ref|NP_851219.1| myosin heavy chain-related protein [Arabidopsis thaliana]
           gi|19310501|gb|AAL84984.1| AT5g59210/mnc17_100
           [Arabidopsis thaliana] gi|21360403|gb|AAM47317.1|
           AT5g59210/mnc17_100 [Arabidopsis thaliana]
           gi|332009774|gb|AED97157.1| myosin heavy chain-related
           protein [Arabidopsis thaliana]
          Length = 434

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 51/122 (41%), Positives = 62/122 (50%)
 Frame = +3

Query: 3   HATLGRRTLEEIRQKRAAERLSKASSGPDLQSSSNPLPSLGINRSQXXXXXXXXXXXXXX 182
           HA+LGRRTLEEIRQKRAA+RLSKASSGPDL    NP     I +S+              
Sbjct: 5   HASLGRRTLEEIRQKRAAQRLSKASSGPDLSEIPNPADFPVIRKSE-------------- 50

Query: 183 XXXXXXXXXXXXXXXXSGGQLSESDISGLVSQIKIXXXXXXXXXXXXKTVISKLQAKEIE 362
                           SG +LSE+D+  L SQ+K             K + SKLQ KE+E
Sbjct: 51  ----------------SGNRLSETDVGALYSQLKELQKKNAEMEERNKILSSKLQTKEVE 94

Query: 363 ND 368
           N+
Sbjct: 95  NE 96


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