BLASTX nr result
ID: Coptis24_contig00010113
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010113 (1538 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|2... 568 e-159 ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins f... 566 e-159 ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins f... 566 e-159 emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera] 565 e-158 ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins f... 554 e-155 >ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|222853008|gb|EEE90555.1| predicted protein [Populus trichocarpa] Length = 342 Score = 568 bits (1463), Expect = e-159 Identities = 254/326 (77%), Positives = 291/326 (89%) Frame = +2 Query: 251 GTLNASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGPWYMQEPMYLQWKQ 430 GTL+ASAGDSDP Y+ C+ QC+++GCV +CF HC FSSDG S+DGPWY QEP+YLQWKQ Sbjct: 18 GTLDASAGDSDPIYRTCVGQCEKSGCVGQRCFSHCNFSSDGVSIDGPWYKQEPLYLQWKQ 77 Query: 431 WDCQSDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSVAFSALNLAMQFHG 610 WDCQSDCRY+CMLD EKE+E LG GPVKYHGKWPFKRV+GIQEPVSVAFSALNLAM FHG Sbjct: 78 WDCQSDCRYYCMLDREKEREALGHGPVKYHGKWPFKRVYGIQEPVSVAFSALNLAMHFHG 137 Query: 611 WLSLFIHLYYKLPLRPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFHSRDVDLTEKLDYS 790 WLS FI LYYKLPL+ Q++K YYEY+ LW IYG ++NSWFWSAVFHSRDVDLTEKLDYS Sbjct: 138 WLSFFILLYYKLPLK-QDKKAYYEYASLWHIYGFLSLNSWFWSAVFHSRDVDLTEKLDYS 196 Query: 791 SAVALLGYSLIVAVLRTFNVRGEATRVMVAAPVLAFVTTHILYLNFFKLDYGLNMKVCVA 970 SAVA LGYSLI+++LR+FNVR EA RVMVAAP+LAF+TTHIL++NF+KLDYG NM+VCV Sbjct: 197 SAVAFLGYSLIMSILRSFNVRDEAARVMVAAPLLAFLTTHILFINFYKLDYGWNMQVCVV 256 Query: 971 MGITQLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQGYVDAHALWHATTI 1150 M + QLLLWA+WAGV+ HPS+WKLW VV+G LAMLLEIYDFPPY+GYVDAHALWHATTI Sbjct: 257 MAVAQLLLWAIWAGVTGHPSRWKLWVVVIGGGLAMLLEIYDFPPYEGYVDAHALWHATTI 316 Query: 1151 PLTYLWWSFIKDDAEFRTLDSLKKVK 1228 PLTY+WWSFI+DDAEFRT + LKK K Sbjct: 317 PLTYIWWSFIRDDAEFRTSNLLKKTK 342 >ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 2 [Vitis vinifera] Length = 342 Score = 567 bits (1460), Expect = e-159 Identities = 255/322 (79%), Positives = 290/322 (90%) Frame = +2 Query: 263 ASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGPWYMQEPMYLQWKQWDCQ 442 AS GD+DP Y+ C+EQC++TGCV ++CF HC+F SDG VDGPWY+QEP+YL+WKQWDCQ Sbjct: 22 ASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQWDCQ 81 Query: 443 SDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSVAFSALNLAMQFHGWLSL 622 SDCRY+CMLD EKE+E LG GPVKYHGKWPFKRV+GIQEP SVA SALNLAMQFHGWLS Sbjct: 82 SDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGWLSF 141 Query: 623 FIHLYYKLPLRPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFHSRDVDLTEKLDYSSAVA 802 FI L YKLPL+P N+K YYEY+ LW IYGL +MNSWFWSAVFHSRDVDLTEKLDYSSAVA Sbjct: 142 FILLNYKLPLKP-NKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVA 200 Query: 803 LLGYSLIVAVLRTFNVRGEATRVMVAAPVLAFVTTHILYLNFFKLDYGLNMKVCVAMGIT 982 LLG+SLI+A+LR+FNVR EA RVMV+AP+LAFVTTHILYLNF+K DYG NMKVCV MG+ Sbjct: 201 LLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVA 260 Query: 983 QLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQGYVDAHALWHATTIPLTY 1162 QLL+WA+WAGV+RHPS+WKLW VVVG LAMLLEIYDFPPY+G+VDAHALWHATTIPLTY Sbjct: 261 QLLIWAIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTY 320 Query: 1163 LWWSFIKDDAEFRTLDSLKKVK 1228 +WWSFIKDDAEF+T + LKKVK Sbjct: 321 IWWSFIKDDAEFQTANLLKKVK 342 >ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 1 [Vitis vinifera] gi|296082755|emb|CBI21760.3| unnamed protein product [Vitis vinifera] Length = 379 Score = 567 bits (1460), Expect = e-159 Identities = 255/322 (79%), Positives = 290/322 (90%) Frame = +2 Query: 263 ASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGPWYMQEPMYLQWKQWDCQ 442 AS GD+DP Y+ C+EQC++TGCV ++CF HC+F SDG VDGPWY+QEP+YL+WKQWDCQ Sbjct: 59 ASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQWDCQ 118 Query: 443 SDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSVAFSALNLAMQFHGWLSL 622 SDCRY+CMLD EKE+E LG GPVKYHGKWPFKRV+GIQEP SVA SALNLAMQFHGWLS Sbjct: 119 SDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGWLSF 178 Query: 623 FIHLYYKLPLRPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFHSRDVDLTEKLDYSSAVA 802 FI L YKLPL+P N+K YYEY+ LW IYGL +MNSWFWSAVFHSRDVDLTEKLDYSSAVA Sbjct: 179 FILLNYKLPLKP-NKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVA 237 Query: 803 LLGYSLIVAVLRTFNVRGEATRVMVAAPVLAFVTTHILYLNFFKLDYGLNMKVCVAMGIT 982 LLG+SLI+A+LR+FNVR EA RVMV+AP+LAFVTTHILYLNF+K DYG NMKVCV MG+ Sbjct: 238 LLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVA 297 Query: 983 QLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQGYVDAHALWHATTIPLTY 1162 QLL+WA+WAGV+RHPS+WKLW VVVG LAMLLEIYDFPPY+G+VDAHALWHATTIPLTY Sbjct: 298 QLLIWAIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTY 357 Query: 1163 LWWSFIKDDAEFRTLDSLKKVK 1228 +WWSFIKDDAEF+T + LKKVK Sbjct: 358 IWWSFIKDDAEFQTANLLKKVK 379 >emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera] Length = 342 Score = 565 bits (1456), Expect = e-158 Identities = 254/322 (78%), Positives = 289/322 (89%) Frame = +2 Query: 263 ASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGPWYMQEPMYLQWKQWDCQ 442 AS GD+DP Y+ C+EQC++TGCV ++CF HC+F SDG VDGPWY+QEP+YL+WKQWDCQ Sbjct: 22 ASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQWDCQ 81 Query: 443 SDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSVAFSALNLAMQFHGWLSL 622 SDCRY+CMLD EKE+E LG GPVKYHGKWPFKRV+GIQEP SVA SALNLAMQFHGWLS Sbjct: 82 SDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGWLSF 141 Query: 623 FIHLYYKLPLRPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFHSRDVDLTEKLDYSSAVA 802 FI L YKLPL+P N+K YYEY+ LW IYGL +MNSWFWSAVFHSRDVDLTEKLDYSSAVA Sbjct: 142 FILLNYKLPLKP-NKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVA 200 Query: 803 LLGYSLIVAVLRTFNVRGEATRVMVAAPVLAFVTTHILYLNFFKLDYGLNMKVCVAMGIT 982 LLG+SLI+A+LR+FNVR EA RVMV+AP+LAFVTTHILYLNF+K DYG NMKVCV MG+ Sbjct: 201 LLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVA 260 Query: 983 QLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQGYVDAHALWHATTIPLTY 1162 QLL+W +WAGV+RHPS+WKLW VVVG LAMLLEIYDFPPY+G+VDAHALWHATTIPLTY Sbjct: 261 QLLIWTIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTY 320 Query: 1163 LWWSFIKDDAEFRTLDSLKKVK 1228 +WWSFIKDDAEF+T + LKKVK Sbjct: 321 IWWSFIKDDAEFQTANLLKKVK 342 >ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins factor 3 [Vitis vinifera] gi|147785290|emb|CAN61923.1| hypothetical protein VITISV_036651 [Vitis vinifera] gi|297741118|emb|CBI31849.3| unnamed protein product [Vitis vinifera] Length = 342 Score = 554 bits (1427), Expect = e-155 Identities = 245/324 (75%), Positives = 286/324 (88%) Frame = +2 Query: 257 LNASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGPWYMQEPMYLQWKQWD 436 LNASAGDSDP Y+ C+EQC++TGCV DKCFQHC+ SSDG+ + GPWY+QEP+YL+WKQWD Sbjct: 20 LNASAGDSDPLYKACIEQCEKTGCVGDKCFQHCKLSSDGNPIGGPWYLQEPLYLRWKQWD 79 Query: 437 CQSDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSVAFSALNLAMQFHGWL 616 C+SDCRYHCML E+E+E LG PVKYHGKWPF+RV+GIQEPVSVA + LNLAMQFHGW+ Sbjct: 80 CRSDCRYHCMLAREEEREELGDKPVKYHGKWPFRRVYGIQEPVSVALATLNLAMQFHGWV 139 Query: 617 SLFIHLYYKLPLRPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFHSRDVDLTEKLDYSSA 796 S I LYYKLPLRP ++K +YEY+GLW IYG+ AMN+WFW+AVFHSRDVDLTEKLDYSS Sbjct: 140 SFLILLYYKLPLRP-DKKTFYEYTGLWHIYGILAMNAWFWNAVFHSRDVDLTEKLDYSSG 198 Query: 797 VALLGYSLIVAVLRTFNVRGEATRVMVAAPVLAFVTTHILYLNFFKLDYGLNMKVCVAMG 976 VALLG++LI+A+LR FNVR EA RVM+AAP++AFVTTHILYLNF+KLDYGLNMKVC+ MG Sbjct: 199 VALLGFTLILAILRAFNVRDEAARVMIAAPLMAFVTTHILYLNFYKLDYGLNMKVCLTMG 258 Query: 977 ITQLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQGYVDAHALWHATTIPL 1156 I QLLLW VWAGV+ HPS+WKLW VVVG +LAM LEIYDFPPY G+VDAHA+WHA IP Sbjct: 259 IAQLLLWTVWAGVTHHPSRWKLWVVVVGGALAMFLEIYDFPPYWGFVDAHAVWHALAIPF 318 Query: 1157 TYLWWSFIKDDAEFRTLDSLKKVK 1228 TYLWWSF+KDD+EFRT +KKVK Sbjct: 319 TYLWWSFVKDDSEFRTSALMKKVK 342