BLASTX nr result

ID: Coptis24_contig00010113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010113
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|2...   568   e-159
ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins f...   566   e-159
ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins f...   566   e-159
emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera]   565   e-158
ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins f...   554   e-155

>ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|222853008|gb|EEE90555.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  568 bits (1463), Expect = e-159
 Identities = 254/326 (77%), Positives = 291/326 (89%)
 Frame = +2

Query: 251  GTLNASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGPWYMQEPMYLQWKQ 430
            GTL+ASAGDSDP Y+ C+ QC+++GCV  +CF HC FSSDG S+DGPWY QEP+YLQWKQ
Sbjct: 18   GTLDASAGDSDPIYRTCVGQCEKSGCVGQRCFSHCNFSSDGVSIDGPWYKQEPLYLQWKQ 77

Query: 431  WDCQSDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSVAFSALNLAMQFHG 610
            WDCQSDCRY+CMLD EKE+E LG GPVKYHGKWPFKRV+GIQEPVSVAFSALNLAM FHG
Sbjct: 78   WDCQSDCRYYCMLDREKEREALGHGPVKYHGKWPFKRVYGIQEPVSVAFSALNLAMHFHG 137

Query: 611  WLSLFIHLYYKLPLRPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFHSRDVDLTEKLDYS 790
            WLS FI LYYKLPL+ Q++K YYEY+ LW IYG  ++NSWFWSAVFHSRDVDLTEKLDYS
Sbjct: 138  WLSFFILLYYKLPLK-QDKKAYYEYASLWHIYGFLSLNSWFWSAVFHSRDVDLTEKLDYS 196

Query: 791  SAVALLGYSLIVAVLRTFNVRGEATRVMVAAPVLAFVTTHILYLNFFKLDYGLNMKVCVA 970
            SAVA LGYSLI+++LR+FNVR EA RVMVAAP+LAF+TTHIL++NF+KLDYG NM+VCV 
Sbjct: 197  SAVAFLGYSLIMSILRSFNVRDEAARVMVAAPLLAFLTTHILFINFYKLDYGWNMQVCVV 256

Query: 971  MGITQLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQGYVDAHALWHATTI 1150
            M + QLLLWA+WAGV+ HPS+WKLW VV+G  LAMLLEIYDFPPY+GYVDAHALWHATTI
Sbjct: 257  MAVAQLLLWAIWAGVTGHPSRWKLWVVVIGGGLAMLLEIYDFPPYEGYVDAHALWHATTI 316

Query: 1151 PLTYLWWSFIKDDAEFRTLDSLKKVK 1228
            PLTY+WWSFI+DDAEFRT + LKK K
Sbjct: 317  PLTYIWWSFIRDDAEFRTSNLLKKTK 342


>ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 2 [Vitis
            vinifera]
          Length = 342

 Score =  567 bits (1460), Expect = e-159
 Identities = 255/322 (79%), Positives = 290/322 (90%)
 Frame = +2

Query: 263  ASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGPWYMQEPMYLQWKQWDCQ 442
            AS GD+DP Y+ C+EQC++TGCV ++CF HC+F SDG  VDGPWY+QEP+YL+WKQWDCQ
Sbjct: 22   ASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQWDCQ 81

Query: 443  SDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSVAFSALNLAMQFHGWLSL 622
            SDCRY+CMLD EKE+E LG GPVKYHGKWPFKRV+GIQEP SVA SALNLAMQFHGWLS 
Sbjct: 82   SDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGWLSF 141

Query: 623  FIHLYYKLPLRPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFHSRDVDLTEKLDYSSAVA 802
            FI L YKLPL+P N+K YYEY+ LW IYGL +MNSWFWSAVFHSRDVDLTEKLDYSSAVA
Sbjct: 142  FILLNYKLPLKP-NKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVA 200

Query: 803  LLGYSLIVAVLRTFNVRGEATRVMVAAPVLAFVTTHILYLNFFKLDYGLNMKVCVAMGIT 982
            LLG+SLI+A+LR+FNVR EA RVMV+AP+LAFVTTHILYLNF+K DYG NMKVCV MG+ 
Sbjct: 201  LLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVA 260

Query: 983  QLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQGYVDAHALWHATTIPLTY 1162
            QLL+WA+WAGV+RHPS+WKLW VVVG  LAMLLEIYDFPPY+G+VDAHALWHATTIPLTY
Sbjct: 261  QLLIWAIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTY 320

Query: 1163 LWWSFIKDDAEFRTLDSLKKVK 1228
            +WWSFIKDDAEF+T + LKKVK
Sbjct: 321  IWWSFIKDDAEFQTANLLKKVK 342


>ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 1 [Vitis
            vinifera] gi|296082755|emb|CBI21760.3| unnamed protein
            product [Vitis vinifera]
          Length = 379

 Score =  567 bits (1460), Expect = e-159
 Identities = 255/322 (79%), Positives = 290/322 (90%)
 Frame = +2

Query: 263  ASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGPWYMQEPMYLQWKQWDCQ 442
            AS GD+DP Y+ C+EQC++TGCV ++CF HC+F SDG  VDGPWY+QEP+YL+WKQWDCQ
Sbjct: 59   ASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQWDCQ 118

Query: 443  SDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSVAFSALNLAMQFHGWLSL 622
            SDCRY+CMLD EKE+E LG GPVKYHGKWPFKRV+GIQEP SVA SALNLAMQFHGWLS 
Sbjct: 119  SDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGWLSF 178

Query: 623  FIHLYYKLPLRPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFHSRDVDLTEKLDYSSAVA 802
            FI L YKLPL+P N+K YYEY+ LW IYGL +MNSWFWSAVFHSRDVDLTEKLDYSSAVA
Sbjct: 179  FILLNYKLPLKP-NKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVA 237

Query: 803  LLGYSLIVAVLRTFNVRGEATRVMVAAPVLAFVTTHILYLNFFKLDYGLNMKVCVAMGIT 982
            LLG+SLI+A+LR+FNVR EA RVMV+AP+LAFVTTHILYLNF+K DYG NMKVCV MG+ 
Sbjct: 238  LLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVA 297

Query: 983  QLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQGYVDAHALWHATTIPLTY 1162
            QLL+WA+WAGV+RHPS+WKLW VVVG  LAMLLEIYDFPPY+G+VDAHALWHATTIPLTY
Sbjct: 298  QLLIWAIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTY 357

Query: 1163 LWWSFIKDDAEFRTLDSLKKVK 1228
            +WWSFIKDDAEF+T + LKKVK
Sbjct: 358  IWWSFIKDDAEFQTANLLKKVK 379


>emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera]
          Length = 342

 Score =  565 bits (1456), Expect = e-158
 Identities = 254/322 (78%), Positives = 289/322 (89%)
 Frame = +2

Query: 263  ASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGPWYMQEPMYLQWKQWDCQ 442
            AS GD+DP Y+ C+EQC++TGCV ++CF HC+F SDG  VDGPWY+QEP+YL+WKQWDCQ
Sbjct: 22   ASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQWDCQ 81

Query: 443  SDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSVAFSALNLAMQFHGWLSL 622
            SDCRY+CMLD EKE+E LG GPVKYHGKWPFKRV+GIQEP SVA SALNLAMQFHGWLS 
Sbjct: 82   SDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVALSALNLAMQFHGWLSF 141

Query: 623  FIHLYYKLPLRPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFHSRDVDLTEKLDYSSAVA 802
            FI L YKLPL+P N+K YYEY+ LW IYGL +MNSWFWSAVFHSRDVDLTEKLDYSSAVA
Sbjct: 142  FILLNYKLPLKP-NKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEKLDYSSAVA 200

Query: 803  LLGYSLIVAVLRTFNVRGEATRVMVAAPVLAFVTTHILYLNFFKLDYGLNMKVCVAMGIT 982
            LLG+SLI+A+LR+FNVR EA RVMV+AP+LAFVTTHILYLNF+K DYG NMKVCV MG+ 
Sbjct: 201  LLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMKVCVVMGVA 260

Query: 983  QLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQGYVDAHALWHATTIPLTY 1162
            QLL+W +WAGV+RHPS+WKLW VVVG  LAMLLEIYDFPPY+G+VDAHALWHATTIPLTY
Sbjct: 261  QLLIWTIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWHATTIPLTY 320

Query: 1163 LWWSFIKDDAEFRTLDSLKKVK 1228
            +WWSFIKDDAEF+T + LKKVK
Sbjct: 321  IWWSFIKDDAEFQTANLLKKVK 342


>ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins factor 3 [Vitis vinifera]
            gi|147785290|emb|CAN61923.1| hypothetical protein
            VITISV_036651 [Vitis vinifera]
            gi|297741118|emb|CBI31849.3| unnamed protein product
            [Vitis vinifera]
          Length = 342

 Score =  554 bits (1427), Expect = e-155
 Identities = 245/324 (75%), Positives = 286/324 (88%)
 Frame = +2

Query: 257  LNASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGPWYMQEPMYLQWKQWD 436
            LNASAGDSDP Y+ C+EQC++TGCV DKCFQHC+ SSDG+ + GPWY+QEP+YL+WKQWD
Sbjct: 20   LNASAGDSDPLYKACIEQCEKTGCVGDKCFQHCKLSSDGNPIGGPWYLQEPLYLRWKQWD 79

Query: 437  CQSDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSVAFSALNLAMQFHGWL 616
            C+SDCRYHCML  E+E+E LG  PVKYHGKWPF+RV+GIQEPVSVA + LNLAMQFHGW+
Sbjct: 80   CRSDCRYHCMLAREEEREELGDKPVKYHGKWPFRRVYGIQEPVSVALATLNLAMQFHGWV 139

Query: 617  SLFIHLYYKLPLRPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFHSRDVDLTEKLDYSSA 796
            S  I LYYKLPLRP ++K +YEY+GLW IYG+ AMN+WFW+AVFHSRDVDLTEKLDYSS 
Sbjct: 140  SFLILLYYKLPLRP-DKKTFYEYTGLWHIYGILAMNAWFWNAVFHSRDVDLTEKLDYSSG 198

Query: 797  VALLGYSLIVAVLRTFNVRGEATRVMVAAPVLAFVTTHILYLNFFKLDYGLNMKVCVAMG 976
            VALLG++LI+A+LR FNVR EA RVM+AAP++AFVTTHILYLNF+KLDYGLNMKVC+ MG
Sbjct: 199  VALLGFTLILAILRAFNVRDEAARVMIAAPLMAFVTTHILYLNFYKLDYGLNMKVCLTMG 258

Query: 977  ITQLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQGYVDAHALWHATTIPL 1156
            I QLLLW VWAGV+ HPS+WKLW VVVG +LAM LEIYDFPPY G+VDAHA+WHA  IP 
Sbjct: 259  IAQLLLWTVWAGVTHHPSRWKLWVVVVGGALAMFLEIYDFPPYWGFVDAHAVWHALAIPF 318

Query: 1157 TYLWWSFIKDDAEFRTLDSLKKVK 1228
            TYLWWSF+KDD+EFRT   +KKVK
Sbjct: 319  TYLWWSFVKDDSEFRTSALMKKVK 342


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