BLASTX nr result

ID: Coptis24_contig00010109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010109
         (1188 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricin...   335   2e-89
ref|XP_002321571.1| predicted protein [Populus trichocarpa] gi|2...   319   8e-85
ref|XP_002318024.1| predicted protein [Populus trichocarpa] gi|2...   317   5e-84
ref|XP_002283525.1| PREDICTED: pollen-specific protein SF3 [Viti...   317   5e-84
ref|XP_004138126.1| PREDICTED: pollen-specific protein SF3-like ...   311   2e-82

>ref|XP_002511450.1| Pollen-specific protein SF3, putative [Ricinus communis]
            gi|223550565|gb|EEF52052.1| Pollen-specific protein SF3,
            putative [Ricinus communis]
          Length = 190

 Score =  335 bits (858), Expect = 2e-89
 Identities = 151/188 (80%), Positives = 164/188 (87%)
 Frame = -3

Query: 1024 MATFAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGVLYCK 845
            MATFAGTTQKCKACEKTVYLVDQL ADNKVYHK CFRCHHCKGTLKL NYSSF+GVLYCK
Sbjct: 1    MATFAGTTQKCKACEKTVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCK 60

Query: 844  PHFDQLLKMTGSLDRSFESAPKTIKVARSLGQGNVNNRISSMFAGTQDKCVTCKKTVYPI 665
            PHFDQL KMTGSLD+SFE  PKT++V RS  Q N N+R+SSMFAGTQDKCV CKKTVYPI
Sbjct: 61   PHFDQLFKMTGSLDKSFEGTPKTVRVDRSADQFNSNSRVSSMFAGTQDKCVACKKTVYPI 120

Query: 664  EKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGNFSQFDKHVN 485
            EKV VD  SYH+ CFRC HGGC+ISPSNY+AHEQ+LYC+HHH QLFK KGNFSQ DKH +
Sbjct: 121  EKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEQRLYCRHHHNQLFKQKGNFSQLDKHEH 180

Query: 484  LNVVPETA 461
            +  V ETA
Sbjct: 181  VKPVTETA 188



 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 32/79 (40%), Positives = 45/79 (56%)
 Frame = -3

Query: 1036 NCFAMATFAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGV 857
            N    + FAGT  KC AC+KTVY ++++  D   YHK CFRC H    +   NY + +  
Sbjct: 96   NSRVSSMFAGTQDKCVACKKTVYPIEKVAVDGTSYHKACFRCTHGGCVISPSNYVAHEQR 155

Query: 856  LYCKPHFDQLLKMTGSLDR 800
            LYC+ H +QL K  G+  +
Sbjct: 156  LYCRHHHNQLFKQKGNFSQ 174


>ref|XP_002321571.1| predicted protein [Populus trichocarpa] gi|222868567|gb|EEF05698.1|
            predicted protein [Populus trichocarpa]
          Length = 191

 Score =  319 bits (818), Expect = 8e-85
 Identities = 143/189 (75%), Positives = 160/189 (84%)
 Frame = -3

Query: 1024 MATFAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGVLYCK 845
            MATFAGTTQKCKAC+KTVYLVDQL  DNK YHK CFRCHHCKGTLKL NYSSF+GVLYC+
Sbjct: 1    MATFAGTTQKCKACDKTVYLVDQLTVDNKFYHKACFRCHHCKGTLKLSNYSSFEGVLYCQ 60

Query: 844  PHFDQLLKMTGSLDRSFESAPKTIKVARSLGQGNVNNRISSMFAGTQDKCVTCKKTVYPI 665
            PHFDQL KMTGSLD+SFE  PKT++  RS  Q   N+++SSMFAGTQ+KCV C KTVYP+
Sbjct: 61   PHFDQLFKMTGSLDKSFEGTPKTVRGDRSADQVLSNSKVSSMFAGTQEKCVACNKTVYPL 120

Query: 664  EKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGNFSQFDKHVN 485
            EKV VD  SYH+ CFRCAHGGC+ISPSNY+AHE +LYC+HHH QLFK KGNFSQF KH +
Sbjct: 121  EKVAVDGTSYHKACFRCAHGGCVISPSNYVAHEHRLYCRHHHNQLFKEKGNFSQFGKHEH 180

Query: 484  LNVVPETAT 458
            L  V ETAT
Sbjct: 181  LTPVDETAT 189



 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 32/79 (40%), Positives = 45/79 (56%)
 Frame = -3

Query: 1036 NCFAMATFAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGV 857
            N    + FAGT +KC AC KTVY ++++  D   YHK CFRC H    +   NY + +  
Sbjct: 96   NSKVSSMFAGTQEKCVACNKTVYPLEKVAVDGTSYHKACFRCAHGGCVISPSNYVAHEHR 155

Query: 856  LYCKPHFDQLLKMTGSLDR 800
            LYC+ H +QL K  G+  +
Sbjct: 156  LYCRHHHNQLFKEKGNFSQ 174


>ref|XP_002318024.1| predicted protein [Populus trichocarpa] gi|222858697|gb|EEE96244.1|
            predicted protein [Populus trichocarpa]
          Length = 191

 Score =  317 bits (811), Expect = 5e-84
 Identities = 141/188 (75%), Positives = 161/188 (85%)
 Frame = -3

Query: 1024 MATFAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGVLYCK 845
            MA FAGTTQKCK+CEKTVY VDQL AD+KVYHK CFRCHHCKGTLKL NYSSF+GVLYCK
Sbjct: 1    MAPFAGTTQKCKSCEKTVYFVDQLTADDKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCK 60

Query: 844  PHFDQLLKMTGSLDRSFESAPKTIKVARSLGQGNVNNRISSMFAGTQDKCVTCKKTVYPI 665
            PHFDQLLKMTGSLD+SF+   KT++V RS  Q   N+++SSMFAGTQ+KCV CKKTVYPI
Sbjct: 61   PHFDQLLKMTGSLDKSFKGTSKTVRVDRSADQVQSNSKVSSMFAGTQEKCVACKKTVYPI 120

Query: 664  EKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGNFSQFDKHVN 485
            E+V VD  SYH+ CFRCAHGGC+ISPSN++AHE +LYC+HHH QLFK KGNFSQ DKH +
Sbjct: 121  ERVAVDGTSYHKACFRCAHGGCVISPSNFVAHEHRLYCRHHHNQLFKQKGNFSQLDKHEH 180

Query: 484  LNVVPETA 461
            +  V ETA
Sbjct: 181  VTPVKETA 188



 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 31/79 (39%), Positives = 46/79 (58%)
 Frame = -3

Query: 1036 NCFAMATFAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGV 857
            N    + FAGT +KC AC+KTVY ++++  D   YHK CFRC H    +   N+ + +  
Sbjct: 96   NSKVSSMFAGTQEKCVACKKTVYPIERVAVDGTSYHKACFRCAHGGCVISPSNFVAHEHR 155

Query: 856  LYCKPHFDQLLKMTGSLDR 800
            LYC+ H +QL K  G+  +
Sbjct: 156  LYCRHHHNQLFKQKGNFSQ 174


>ref|XP_002283525.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera]
            gi|297733831|emb|CBI15078.3| unnamed protein product
            [Vitis vinifera]
          Length = 182

 Score =  317 bits (811), Expect = 5e-84
 Identities = 143/177 (80%), Positives = 156/177 (88%)
 Frame = -3

Query: 1024 MATFAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGVLYCK 845
            MATFAGTTQKCKACEKTVYLVD+L ADNKVYHK CFRCHHCKGTLKL NYSSF+GVLYCK
Sbjct: 1    MATFAGTTQKCKACEKTVYLVDELTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCK 60

Query: 844  PHFDQLLKMTGSLDRSFESAPKTIKVARSLGQGNVNNRISSMFAGTQDKCVTCKKTVYPI 665
            PHFDQL KMTGSLD+SFE APKT+   RS+ QG  N+++SSMFAGTQ+KCV CKKTVYPI
Sbjct: 61   PHFDQLFKMTGSLDKSFEGAPKTV---RSVDQGQTNSKVSSMFAGTQEKCVACKKTVYPI 117

Query: 664  EKVTVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGNFSQFDK 494
            EKV VD  SYH+ CFRC HGGC ISPSNYIAHE +LYC+HHH+QLFK KGNFSQ DK
Sbjct: 118  EKVGVDGTSYHKACFRCTHGGCTISPSNYIAHEHRLYCRHHHSQLFKEKGNFSQLDK 174



 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 33/79 (41%), Positives = 46/79 (58%)
 Frame = -3

Query: 1036 NCFAMATFAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGV 857
            N    + FAGT +KC AC+KTVY ++++  D   YHK CFRC H   T+   NY + +  
Sbjct: 93   NSKVSSMFAGTQEKCVACKKTVYPIEKVGVDGTSYHKACFRCTHGGCTISPSNYIAHEHR 152

Query: 856  LYCKPHFDQLLKMTGSLDR 800
            LYC+ H  QL K  G+  +
Sbjct: 153  LYCRHHHSQLFKEKGNFSQ 171


>ref|XP_004138126.1| PREDICTED: pollen-specific protein SF3-like [Cucumis sativus]
            gi|449477390|ref|XP_004155009.1| PREDICTED:
            pollen-specific protein SF3-like [Cucumis sativus]
          Length = 186

 Score =  311 bits (798), Expect = 2e-82
 Identities = 137/175 (78%), Positives = 154/175 (88%)
 Frame = -3

Query: 1015 FAGTTQKCKACEKTVYLVDQLRADNKVYHKTCFRCHHCKGTLKLGNYSSFQGVLYCKPHF 836
            F GTTQKCKAC+KTVYLVDQL ADNKVYHK CFRCHHCK TLKL NYSSF+GVLYCKPHF
Sbjct: 5    FLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYCKPHF 64

Query: 835  DQLLKMTGSLDRSFESAPKTIKVARSLGQGNVNNRISSMFAGTQDKCVTCKKTVYPIEKV 656
            DQL KMTGSL++SFE+ P+T++  RS  Q   N+++SS+FAGTQDKCVTCKKTVYPIEKV
Sbjct: 65   DQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYPIEKV 124

Query: 655  TVDANSYHRPCFRCAHGGCLISPSNYIAHEQKLYCKHHHTQLFKVKGNFSQFDKH 491
             VD+ SYHR CFRC+HGGC+ISPSNYIAHE +LYC+HHH QLFK KGNFSQ DKH
Sbjct: 125  AVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKH 179


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