BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010108
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516644.1| ran binding protein, putative [Ricinus commu...    56   3e-06
ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana] ...    56   3e-06
dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana]         56   3e-06
ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arab...    55   8e-06

>ref|XP_002516644.1| ran binding protein, putative [Ricinus communis]
           gi|223544216|gb|EEF45739.1| ran binding protein,
           putative [Ricinus communis]
          Length = 217

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
 Frame = +1

Query: 13  FDDLGDFWGKGEKIWCSMKLLKHKTSGKVRVLLTEKWGDRKIANHPISSGMVVTK-LEEI 189
           FD  G+ W   E+   S+KLL+HK +GKVR+++ +    +  ANH + + M V +     
Sbjct: 59  FDKEGNQWK--ERGAGSVKLLRHKETGKVRLVMRQSKTLKICANHLVLASMTVQEHAGNE 116

Query: 190 HCCSWAATDSINGE--EMHFTFEFITEDDLQKFLRIFRESVESEKRKK--YDASIQLERQ 357
             C W ATD  +GE  +  F   F + ++ + F+ +F+E  ES+K K+   DA+   E  
Sbjct: 117 KSCVWHATDFADGELKDELFCIRFPSIENCKSFMEMFQEVAESQKSKEENKDATAAAEAL 176

Query: 358 GKL 366
            KL
Sbjct: 177 DKL 179


>ref|NP_200667.2| Ran-binding protein 1-c [Arabidopsis thaliana]
           gi|75275082|sp|P92985.1|RBP1C_ARATH RecName:
           Full=Ran-binding protein 1 homolog c
           gi|1732511|gb|AAB38776.1| Ran binding protein 1 homolog
           [Arabidopsis thaliana] gi|90568020|gb|ABD94080.1|
           At5g58590 [Arabidopsis thaliana]
           gi|332009690|gb|AED97073.1| Ran-binding protein 1-c
           [Arabidopsis thaliana]
          Length = 219

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
 Frame = +1

Query: 13  FDDLGDFWGKGEKIWCSMKLLKHKTSGKVRVLLTEKWGDRKIANHPISSGMVVTKLE-EI 189
           FD  G+ W   E+   ++KLLKHK +GKVR+++ +    +  ANH ISSGM V +     
Sbjct: 58  FDKEGNQWK--ERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNE 115

Query: 190 HCCSWAATDSINGE--EMHFTFEFITEDDLQKFLRIFRESVESEKRKKYDASIQLERQGK 363
             C W ATD  +GE  +  F   F + ++ + F+  F E  ES++  K   S Q +    
Sbjct: 116 KSCLWHATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGK--ESTQGDEAAG 173

Query: 364 LLDN 375
           L++N
Sbjct: 174 LIEN 177


>dbj|BAA97328.1| unnamed protein product [Arabidopsis thaliana]
          Length = 248

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
 Frame = +1

Query: 13  FDDLGDFWGKGEKIWCSMKLLKHKTSGKVRVLLTEKWGDRKIANHPISSGMVVTKLE-EI 189
           FD  G+ W   E+   ++KLLKHK +GKVR+++ +    +  ANH ISSGM V +     
Sbjct: 58  FDKEGNQWK--ERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNE 115

Query: 190 HCCSWAATDSINGE--EMHFTFEFITEDDLQKFLRIFRESVESEKRKKYDASIQLERQGK 363
             C W ATD  +GE  +  F   F + ++ + F+  F E  ES++  K   S Q +    
Sbjct: 116 KSCLWHATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGK--ESTQGDEAAG 173

Query: 364 LLDN 375
           L++N
Sbjct: 174 LIEN 177


>ref|XP_002866276.1| hypothetical protein ARALYDRAFT_495982 [Arabidopsis lyrata subsp.
           lyrata] gi|297312111|gb|EFH42535.1| hypothetical protein
           ARALYDRAFT_495982 [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
 Frame = +1

Query: 13  FDDLGDFWGKGEKIWCSMKLLKHKTSGKVRVLLTEKWGDRKIANHPISSGMVVTKLE-EI 189
           FD  G+ W   E+   ++KLLKHK +GKVR+++ +    +  ANH ISSGM V +     
Sbjct: 58  FDKEGNQWK--ERGAGTVKLLKHKQTGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNE 115

Query: 190 HCCSWAATDSINGE--EMHFTFEFITEDDLQKFLRIFRESVESEK 318
             C W ATD  +GE  +  F   F + ++ + F+  F E  ES++
Sbjct: 116 KSCLWHATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQ 160