BLASTX nr result
ID: Coptis24_contig00010106
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010106
(479 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [V... 184 8e-45
ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [G... 172 1e-44
ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [G... 171 2e-44
ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucum... 179 2e-43
ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [V... 179 2e-43
>ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|297735988|emb|CBI23962.3| unnamed protein product
[Vitis vinifera]
Length = 513
Score = 184 bits (466), Expect = 8e-45
Identities = 98/189 (51%), Positives = 119/189 (62%), Gaps = 41/189 (21%)
Frame = +2
Query: 35 HVRHALASVSFDVLYR*LKR-------------------------------------QEM 103
H+ H A+VSFDVLYR L+ QE
Sbjct: 42 HLGHGRAAVSFDVLYRYLQHLGYEVTYVRNFTDVDDKIIRRANELGENPLTLSSHFCQEY 101
Query: 104 IPWIWKI--FSATHLP--TNRVSLII*RITEIIRNGCAYEVDGDVFFAVDKSPNYGRLSG 271
+ + + S TH P ++ + I IT+II N CAY +DGDV+FAVDKSPNYGRLSG
Sbjct: 102 LDDMTDLHCLSPTHQPRVSDHMDQIKDMITQIINNDCAYTIDGDVYFAVDKSPNYGRLSG 161
Query: 272 QVIEDNQAGKRVTVDSRKRNSADFVLWKASKPGEPSWESPWGCGRPGWHIECSAMSSHHL 451
+ +E+N+AG+RV VDSRKRN ADF LWKA+KPGEPSW+SPWG GRPGWHIECSAMS+H+L
Sbjct: 162 RKLENNRAGERVAVDSRKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYL 221
Query: 452 TSKFDIHSG 478
T KFDIH G
Sbjct: 222 TFKFDIHGG 230
>ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 548
Score = 172 bits (435), Expect(2) = 1e-44
Identities = 78/101 (77%), Positives = 88/101 (87%)
Frame = +2
Query: 176 ITEIIRNGCAYEVDGDVFFAVDKSPNYGRLSGQVIEDNQAGKRVTVDSRKRNSADFVLWK 355
IT+II NG AYEVDGDVF+AVDK PNYG LSGQ +E N+AG+RV VDSRKR+ ADF LWK
Sbjct: 131 ITQIINNGYAYEVDGDVFYAVDKCPNYGMLSGQRLEHNRAGERVAVDSRKRHPADFALWK 190
Query: 356 ASKPGEPSWESPWGCGRPGWHIECSAMSSHHLTSKFDIHSG 478
A+KPGEPSW+SPWG GRPGWHIECSAMS+ +LT KFDIH G
Sbjct: 191 AAKPGEPSWDSPWGPGRPGWHIECSAMSACYLTHKFDIHGG 231
Score = 33.1 bits (74), Expect(2) = 1e-44
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 15/51 (29%)
Frame = +1
Query: 79 QIIKKARD---DPL------------DMEDLQRHSPTHQPRVSDHIKDNRD 186
+IIK+A + DPL DM DLQ +P+ +PRVS+H+ + +D
Sbjct: 79 KIIKRANETGEDPLMLSNRFCDEYNADMADLQCETPSREPRVSEHLNEIKD 129
>ref|XP_003555910.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
Length = 553
Score = 171 bits (434), Expect(2) = 2e-44
Identities = 78/101 (77%), Positives = 88/101 (87%)
Frame = +2
Query: 176 ITEIIRNGCAYEVDGDVFFAVDKSPNYGRLSGQVIEDNQAGKRVTVDSRKRNSADFVLWK 355
IT+II NG AYEVDGDVF+AVDK PNYG LSGQ +E N+AG+RV VDSRKR+ ADF LWK
Sbjct: 131 ITQIISNGYAYEVDGDVFYAVDKCPNYGMLSGQRLEHNRAGERVAVDSRKRHPADFALWK 190
Query: 356 ASKPGEPSWESPWGCGRPGWHIECSAMSSHHLTSKFDIHSG 478
A+KPGEPSW+SPWG GRPGWHIECSAMS+ +LT KFDIH G
Sbjct: 191 AAKPGEPSWDSPWGPGRPGWHIECSAMSACYLTHKFDIHGG 231
Score = 32.3 bits (72), Expect(2) = 2e-44
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 15/51 (29%)
Frame = +1
Query: 79 QIIKKARD---DPL------------DMEDLQRHSPTHQPRVSDHIKDNRD 186
+IIK+A + DPL DM DLQ +P+ +PRVS+H+ + +D
Sbjct: 79 KIIKRANETGEDPLMLSNRFCDEYNADMADLQCKTPSKEPRVSEHLNEIKD 129
>ref|XP_004150192.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
gi|449508099|ref|XP_004163218.1| PREDICTED:
cysteine--tRNA ligase-like [Cucumis sativus]
Length = 562
Score = 179 bits (454), Expect = 2e-43
Identities = 97/189 (51%), Positives = 118/189 (62%), Gaps = 41/189 (21%)
Frame = +2
Query: 35 HVRHALASVSFDVLYR*LKR-------------------------------------QEM 103
H+ HA A+V+FDVLYR LK QE
Sbjct: 41 HIGHARAAVNFDVLYRYLKHLGYEVTYVRNFTDVDDKIIRRANESGENPFALSDRFCQEY 100
Query: 104 IPWIWKI--FSATHLP--TNRVSLII*RITEIIRNGCAYEVDGDVFFAVDKSPNYGRLSG 271
+ + + S TH P ++ + I IT+II+NG Y VDGDVFF+VDK PNYG+LSG
Sbjct: 101 LSDMADLQCLSPTHQPRVSDHLEQIKDMITQIIKNGYGYAVDGDVFFSVDKFPNYGQLSG 160
Query: 272 QVIEDNQAGKRVTVDSRKRNSADFVLWKASKPGEPSWESPWGCGRPGWHIECSAMSSHHL 451
Q +E+++AG+RV VDSRK N ADF LWKA+KPGEPSWESPWG GRPGWHIECSAMS+H+L
Sbjct: 161 QKLENHRAGERVAVDSRKNNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAHYL 220
Query: 452 TSKFDIHSG 478
T KFDIH G
Sbjct: 221 TFKFDIHGG 229
>ref|XP_003631732.1| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
gi|296087508|emb|CBI34097.3| unnamed protein product
[Vitis vinifera]
Length = 513
Score = 179 bits (454), Expect = 2e-43
Identities = 98/189 (51%), Positives = 115/189 (60%), Gaps = 41/189 (21%)
Frame = +2
Query: 35 HVRHALASVSFDVLYR*LKR-------------------------------------QEM 103
H+ HA A+V FDVLYR L+ QE
Sbjct: 42 HLGHARAAVCFDVLYRYLQHLGYEVTYVRNFTDVDDKIIRRANELGENPLTLSSRFCQEY 101
Query: 104 IPWIWKIFSATHLPTNRVS----LII*RITEIIRNGCAYEVDGDVFFAVDKSPNYGRLSG 271
+ + + T RVS I IT+II N CAY +DGDV+FAVDKSPNYGRLSG
Sbjct: 102 LDDMTDLQCLTPTQQPRVSDHMDQIKDMITQIINNDCAYIIDGDVYFAVDKSPNYGRLSG 161
Query: 272 QVIEDNQAGKRVTVDSRKRNSADFVLWKASKPGEPSWESPWGCGRPGWHIECSAMSSHHL 451
+ +EDN+AG+RV VDSRKRN ADF LWKA+KP EPSW+SPWG GRPGWHIECSAMS+H+L
Sbjct: 162 RKLEDNRAGERVAVDSRKRNPADFALWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYL 221
Query: 452 TSKFDIHSG 478
T KFDIH G
Sbjct: 222 TFKFDIHGG 230