BLASTX nr result

ID: Coptis24_contig00010105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010105
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269635.2| PREDICTED: uncharacterized protein LOC100251...   102   2e-20
ref|XP_003632359.1| PREDICTED: uncharacterized protein LOC100266...   102   4e-20
emb|CBI32246.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002269551.1| PREDICTED: uncharacterized protein LOC100261...   102   4e-20
emb|CAN68941.1| hypothetical protein VITISV_028996 [Vitis vinifera]   102   4e-20

>ref|XP_002269635.2| PREDICTED: uncharacterized protein LOC100251083, partial [Vitis
           vinifera]
          Length = 375

 Score =  102 bits (255), Expect = 2e-20
 Identities = 53/146 (36%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
 Frame = +1

Query: 52  MSYFVLCKKLLFQGNTSR-----NLSTHFILLQNSYYYKSFTSLAKESFSSQLNIVSYLV 216
           M+   LCK+++   N  +         HF+     + ++SF+S  + SF+     VSYL+
Sbjct: 1   MATSFLCKRVVSLKNVGQMFEISRAQVHFLQNTKPFRFRSFSSPKQHSFT-----VSYLM 55

Query: 217 DSCGLSHEAATKAAKKLQFKSTSRPDSVLKLFQDYGLTKTQITNLIIKRPTLILSNPHKT 396
           +SCGLS E A  A++K+QF++  R DSVL L ++YG T T I+ ++ + P L+ +NP KT
Sbjct: 56  NSCGLSPETALSASRKVQFETPERADSVLALLRNYGCTNTHISKIVSRYPLLLTANPEKT 115

Query: 397 VEPKLQILKKIGFSGHELGELLLQDP 474
           + PKL+  + +GFSG +L  ++   P
Sbjct: 116 LLPKLEFFRSVGFSGPDLASIVAASP 141


>ref|XP_003632359.1| PREDICTED: uncharacterized protein LOC100266539 [Vitis vinifera]
          Length = 398

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/141 (36%), Positives = 87/141 (61%), Gaps = 5/141 (3%)
 Frame = +1

Query: 67  LCKKLLFQGNTSR-----NLSTHFILLQNSYYYKSFTSLAKESFSSQLNIVSYLVDSCGL 231
           LC++++   N ++         HF+  +    ++SF+S  + SF+     VSYL++SCGL
Sbjct: 6   LCRRVVSLANVAQVFEISRAPVHFLQNRQLLMFRSFSSPKQHSFT-----VSYLMNSCGL 60

Query: 232 SHEAATKAAKKLQFKSTSRPDSVLKLFQDYGLTKTQITNLIIKRPTLILSNPHKTVEPKL 411
           S E+A  A++K+QF++  R DSVL L ++YG T T I+ ++ + P L+ +NP KT+ PKL
Sbjct: 61  SPESALSASRKVQFETPERADSVLALLRNYGCTNTHISKIVSRYPVLLTANPEKTLLPKL 120

Query: 412 QILKKIGFSGHELGELLLQDP 474
           +  + +GFSG +L  ++   P
Sbjct: 121 EFFRSVGFSGPDLASIVAASP 141


>emb|CBI32246.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/146 (36%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
 Frame = +1

Query: 52  MSYFVLCKKLLFQGNTSRNLS-----THFILLQNSYYYKSFTSLAKESFSSQLNIVSYLV 216
           MS   LC++++   N  +         HF+       ++SF S  + SF+     VSYL+
Sbjct: 1   MSTSFLCRRVVSLTNVGQMFEISRTPVHFLQNSQLLMFRSFFSPKQHSFT-----VSYLM 55

Query: 217 DSCGLSHEAATKAAKKLQFKSTSRPDSVLKLFQDYGLTKTQITNLIIKRPTLILSNPHKT 396
           +SCGLS E+A  A++K+QF++  R DSVL L ++YG T T I+ ++ K P L+ +NP KT
Sbjct: 56  NSCGLSPESALSASRKIQFETPERADSVLALLRNYGCTNTHISKIVSKYPLLLTANPEKT 115

Query: 397 VEPKLQILKKIGFSGHELGELLLQDP 474
           + PKL+  + +GFSG +L  +++  P
Sbjct: 116 LLPKLEFFRSVGFSGPDLAGIIVAKP 141


>ref|XP_002269551.1| PREDICTED: uncharacterized protein LOC100261332 [Vitis vinifera]
          Length = 462

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/146 (36%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
 Frame = +1

Query: 52  MSYFVLCKKLLFQGNTSRNLS-----THFILLQNSYYYKSFTSLAKESFSSQLNIVSYLV 216
           MS   LC++++   N  +         HF+       ++SF S  + SF+     VSYL+
Sbjct: 1   MSTSFLCRRVVSLTNVGQMFEISRTPVHFLQNSQLLMFRSFFSPKQHSFT-----VSYLM 55

Query: 217 DSCGLSHEAATKAAKKLQFKSTSRPDSVLKLFQDYGLTKTQITNLIIKRPTLILSNPHKT 396
           +SCGLS E+A  A++K+QF++  R DSVL L ++YG T T I+ ++ K P L+ +NP KT
Sbjct: 56  NSCGLSPESALSASRKIQFETPERADSVLALLRNYGCTNTHISKIVSKYPLLLTANPEKT 115

Query: 397 VEPKLQILKKIGFSGHELGELLLQDP 474
           + PKL+  + +GFSG +L  +++  P
Sbjct: 116 LLPKLEFFRSVGFSGPDLAGIIVAKP 141


>emb|CAN68941.1| hypothetical protein VITISV_028996 [Vitis vinifera]
          Length = 2634

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/141 (36%), Positives = 87/141 (61%), Gaps = 5/141 (3%)
 Frame = +1

Query: 67   LCKKLLFQGNTSR-----NLSTHFILLQNSYYYKSFTSLAKESFSSQLNIVSYLVDSCGL 231
            LC++++   N ++         HF+  +    ++SF+S  + SF+     VSYL++SCGL
Sbjct: 2242 LCRRVVSLANVAQVFEISRAPVHFLQNRQLLMFRSFSSPKQHSFT-----VSYLMNSCGL 2296

Query: 232  SHEAATKAAKKLQFKSTSRPDSVLKLFQDYGLTKTQITNLIIKRPTLILSNPHKTVEPKL 411
            S E+A  A++K+QF++  R DSVL L ++YG T T I+ ++ + P L+ +NP KT+ PKL
Sbjct: 2297 SPESALSASRKVQFETPERADSVLALLRNYGCTNTHISKIVSRYPVLLTANPEKTLLPKL 2356

Query: 412  QILKKIGFSGHELGELLLQDP 474
            +  + +GFSG +L  ++   P
Sbjct: 2357 EFFRSVGFSGPDLASIVAASP 2377



 Score =  101 bits (252), Expect = 6e-20
 Identities = 54/146 (36%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
 Frame = +1

Query: 52   MSYFVLCKKLLFQGNTSRNLS-----THFILLQNSYYYKSFTSLAKESFSSQLNIVSYLV 216
            MS   LC++++   N  +         HF+       ++SF S  + SF+     VSYL+
Sbjct: 1748 MSTSFLCRRVVSLTNVGQMFEISRTPVHFLQNXQLLMFRSFFSPKQHSFT-----VSYLM 1802

Query: 217  DSCGLSHEAATKAAKKLQFKSTSRPDSVLKLFQDYGLTKTQITNLIIKRPTLILSNPHKT 396
            +SCGLS E+A  A++K+QF++  R DSVL L ++YG T T I+ ++ K P L+ +NP KT
Sbjct: 1803 NSCGLSPESALSASRKIQFETPERADSVLALLRNYGCTNTHISKIVSKYPLLLTANPEKT 1862

Query: 397  VEPKLQILKKIGFSGHELGELLLQDP 474
            + PKL+  + +GFSG +L  +++  P
Sbjct: 1863 LLPKLEFFRSVGFSGPDLAGIIVAKP 1888



 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/115 (42%), Positives = 79/115 (68%)
 Frame = +1

Query: 130 LQNSYYYKSFTSLAKESFSSQLNIVSYLVDSCGLSHEAATKAAKKLQFKSTSRPDSVLKL 309
           LQN  +++SF+S  + SF+     VSYL++SCGLS E+A  A++K+QF++  R DSVL L
Sbjct: 515 LQN--WFRSFSSPKQHSFT-----VSYLMNSCGLSTESALSASRKVQFETPERADSVLAL 567

Query: 310 FQDYGLTKTQITNLIIKRPTLILSNPHKTVEPKLQILKKIGFSGHELGELLLQDP 474
            ++YG T T I+ ++ + P L+ +NP KT+ PKL+  + +GFSG +L  +++  P
Sbjct: 568 LRNYGCTNTHISKIVSRYPLLLTANPEKTLLPKLEFFRSVGFSGPDLASIVVSSP 622



 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 53/146 (36%), Positives = 85/146 (58%), Gaps = 5/146 (3%)
 Frame = +1

Query: 52  MSYFVLCKKLLFQGNTSR-----NLSTHFILLQNSYYYKSFTSLAKESFSSQLNIVSYLV 216
           MS   LCK+++   N  +         HF+       ++SF+S  + SF+     VSYL+
Sbjct: 1   MSTSFLCKRVVSLTNVGQMFEISRTQMHFLQNTQLLIFRSFSSSKQHSFT-----VSYLI 55

Query: 217 DSCGLSHEAATKAAKKLQFKSTSRPDSVLKLFQDYGLTKTQITNLIIKRPTLILSNPHKT 396
           +SCGLS E+A  A++K+QF++    DSVL L ++YG T T I+ ++ K P L+++N  KT
Sbjct: 56  NSCGLSPESALSASRKVQFETPDGADSVLALLRNYGCTNTHISKIVSKYPLLLIANSEKT 115

Query: 397 VEPKLQILKKIGFSGHELGELLLQDP 474
           + PKL+     GFSG +L  +++  P
Sbjct: 116 LLPKLEFFXSAGFSGPDLVRIVVGSP 141



 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/109 (42%), Positives = 73/109 (66%)
 Frame = +1

Query: 148  YKSFTSLAKESFSSQLNIVSYLVDSCGLSHEAATKAAKKLQFKSTSRPDSVLKLFQDYGL 327
            ++SF+S  + SF+     VSYL++SCGLS E A  A++K+QF++  R DSVL L ++YG 
Sbjct: 892  FRSFSSPKQXSFT-----VSYLMNSCGLSPEXALSASRKVQFETPERADSVLALLRNYGC 946

Query: 328  TKTQITNLIIKRPTLILSNPHKTVEPKLQILKKIGFSGHELGELLLQDP 474
            T T I+ ++ + P L+ +NP KT+ PKL+  + +GFSG +L  ++   P
Sbjct: 947  TNTHISKIVSRYPLLLTANPEKTLLPKLEFFRSVGFSGPDLASIVAASP 995



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/96 (34%), Positives = 58/96 (60%)
 Frame = +1

Query: 187  SQLNIVSYLVDSCGLSHEAATKAAKKLQFKSTSRPDSVLKLFQDYGLTKTQITNLIIKRP 366
            ++ N++  L    G   + A  A++K+QF++  R DSVL L ++YG T   I+ ++ + P
Sbjct: 1262 TECNMLGLLQCXPGNQEKXALSASRKIQFETPERADSVLALLRNYGCTNXHISKIVSRYP 1321

Query: 367  TLILSNPHKTVEPKLQILKKIGFSGHELGELLLQDP 474
             L+ +NP KT+ PKL+    +GFSG +L  +++  P
Sbjct: 1322 LLLTANPEKTLLPKLEFFCSVGFSGXDLASIVVAGP 1357


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