BLASTX nr result

ID: Coptis24_contig00010103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010103
         (2286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534059.1| 60S ribosomal protein L34, putative [Ricinus...   394   e-107
ref|XP_002278235.1| PREDICTED: uncharacterized protein LOC100268...   390   e-106
ref|XP_003551731.1| PREDICTED: uncharacterized protein LOC100785...   312   3e-82
emb|CBI22220.3| unnamed protein product [Vitis vinifera]              311   4e-82
ref|XP_002331501.1| predicted protein [Populus trichocarpa] gi|2...   309   2e-81

>ref|XP_002534059.1| 60S ribosomal protein L34, putative [Ricinus communis]
            gi|223525913|gb|EEF28325.1| 60S ribosomal protein L34,
            putative [Ricinus communis]
          Length = 764

 Score =  394 bits (1013), Expect = e-107
 Identities = 252/625 (40%), Positives = 358/625 (57%), Gaps = 13/625 (2%)
 Frame = +2

Query: 449  GTVNEFFWEKMVFIASSFWFSVSTFMVTLFRSITNSFFRYGIDVSTEKECFKANDVVTNE 628
            G+VN F  +K+VF   SFW SVST  + LF  ++ +  R   D  +++     ND+   E
Sbjct: 2    GSVNVFLRKKLVFCVDSFWVSVSTLFLALFHFLSGAICRVKDDDFSQR-----NDLSCTE 56

Query: 629  GNEIEVLDYEDS-DNDTLG------EKETXXXXXXXXXXXXYNDSVSSIGDTIAS-TSNK 784
              E  V ++ED+ +ND L       E+ET              +    + +++++ T+NK
Sbjct: 57   -QEANVTEFEDTKENDVLAKEEEEEEEETPQFFFKFQYQTYGENHKPFVSNSVSTATTNK 115

Query: 785  REFIPKKVLSGFIEEPNVMSFTVKEMYLNANEVSVDNKEILDDRFLSEK----DFMKHNS 952
               +  K  S ++E+P V S TVKE+Y ++     +NKE++DDR L E+    +F+   S
Sbjct: 116  YAVLSSKGSSLYLEKPEVYSLTVKELYADS---VANNKEVIDDRILPEEKAETEFIYEES 172

Query: 953  EREVVNEEIMNNLYSVEESENLECVVLSEAXXXXXXXXXXXXXXXXXXXXFNDEIDFIDG 1132
            + EV   E +    SVE S     + ++E                     F  E DF+  
Sbjct: 173  KEEVT--EKLEAETSVEGSNLGNGMAINEEKNNAWSDHQVSRDDDK----FLSEKDFV-- 224

Query: 1133 NELCGFDSEPESVKLWDKFSVMNHMMDSNSDEFLSDGDFDSEDEPESAVELGEKKVEIME 1312
                 +D++ +S  +     V+N  + S  + FLSD +F+   E    V L   + E+ E
Sbjct: 225  ---APYDTDSDSDSITSSHEVINRFVPSIREGFLSDKNFEDAFE---FVTLKGTERELAE 278

Query: 1313 DTQNSEEIHLETQGILDQEGFELSDRTLPFENPTGHESTDIDEV-LEMINDIEKLEELHL 1489
            +    EE+ L+       + + L + +      +G++  D DE   +++ +++ LE+ ++
Sbjct: 279  ELTEEEEMELD-------DIYNLQNCS------SGYDPDDFDEEDSDILEELKNLEDSNM 325

Query: 1490 QHSSILETDAHIEREFREIQDECEQEDSERKGADVVGDXXXXXXXXXXXXXXXDCKESNL 1669
            Q+S   +   +   E    Q+E  + D E K                      D ++S  
Sbjct: 326  QNSDEKDVQGNDNLE----QEEANRNDKETKEC------------------LDDSEKSGS 363

Query: 1670 QEQSLSDFEESNGLETLWEHQDLIEQLKMELRKVRDTGLPTILEESESPRMSEDLKPWKI 1849
            Q+ S  D E+SNGLE+LWEHQ+LIEQLKMEL+KVR TGLPTILEE ESP++ EDLKPWKI
Sbjct: 364  QDSSAWDAEDSNGLESLWEHQELIEQLKMELKKVRATGLPTILEEDESPKIMEDLKPWKI 423

Query: 1850 DEKFEHEDRMDELHKFYKSYRERMRKFDILNYQKMYAIGFLQLKDHPLQSITTRKSSTPT 2029
            DEKF+ EDRM ELHKFYKSYRERMRKFDILNYQKMYA+GFLQ KD PL+S+++ K STP 
Sbjct: 424  DEKFQREDRMGELHKFYKSYRERMRKFDILNYQKMYALGFLQSKD-PLKSLSSNKVSTPA 482

Query: 2030 LTSMLSQNFLLPKRRRPEADSSIMFVRELESHLETVYVGQLCLSWEFLHWQYGKARELLE 2209
            LTS+LSQ FLL KR++  +D  + F++EL S LE +YVGQ+CLSWE LHWQY KA E+ +
Sbjct: 483  LTSLLSQKFLLGKRKKSSSDPMMSFIKELHSDLEMIYVGQMCLSWEILHWQYEKALEIWD 542

Query: 2210 SDPYEIRPYNQVAGEFQQFQVLMQR 2284
            SDPY IR YN+VAGEFQQFQVLMQR
Sbjct: 543  SDPYGIRCYNEVAGEFQQFQVLMQR 567


>ref|XP_002278235.1| PREDICTED: uncharacterized protein LOC100268097 [Vitis vinifera]
          Length = 728

 Score =  390 bits (1003), Expect = e-106
 Identities = 252/639 (39%), Positives = 340/639 (53%), Gaps = 27/639 (4%)
 Frame = +2

Query: 449  GTVNEFFWEKMVFIASSFWFSVSTFMVTLFRSITNSFFRYGIDVSTEKECFKAN------ 610
            G+VN+F ++KMV  A SFW SVST+++ LF  I   FFR+  D  +  +    N      
Sbjct: 2    GSVNQFLYQKMVLFAQSFWVSVSTYLLPLFSFIFRYFFRFQEDDKSGTKNLNLNWNGSEN 61

Query: 611  -----------------DVVTNEGNEIEVLDYEDSDNDTLGEKETXXXXXXXXXXXXYND 739
                             +  T +G E E+   +  D++   E               +  
Sbjct: 62   PPQEIKQTDLNCADPDKEAETEDGEEAELDAVKLEDSEVEEETPKSFLSFKFQAYEEFAK 121

Query: 740  SVSSIGDTIAS---TSNKREFIPKKVLSGFIEEPNVMSFTVKEMYLNANEVSVDNKEILD 910
            ++   GD ++    ++NK EF+  K +S F+EEP  +SFTVKE+Y N+N+ S        
Sbjct: 122  TLGGNGDPVSPETMSTNKHEFMHGKEVSSFMEEPEAVSFTVKELYTNSNDGSSQ------ 175

Query: 911  DRFLSEKDFMKHNSEREVVNEEIMNNLYSVEESENLECVVLSEAXXXXXXXXXXXXXXXX 1090
                 E DF + NSE E V+ E+      +++    E   +SE                 
Sbjct: 176  -----ENDFSQQNSEAEAVHGEVSEISPKLDQLSENELPHVSEK---------------- 214

Query: 1091 XXXXFNDEIDFIDGNELCGFDSEPESVKLWDKFSVMNHMMDSNSDEFLSDGDFDSEDEPE 1270
                   E+ F+   ++   DS+ E    W     ++  +DSNS+EFLSD DF+   E +
Sbjct: 215  -------EVQFLSPEDVLASDSKSEESTNWSPD--LSQSVDSNSNEFLSDKDFE---ELD 262

Query: 1271 SAVELGEKKVEIMEDTQNSEEIHLETQGILDQEGFELSDRTLPFENPTGHESTDIDEVLE 1450
            + +++G +++++ E            +G+L                  G E  D  +   
Sbjct: 263  NLIDIGGQQIDLRE----------LMKGVL------------------GTEDDDFHQ--- 291

Query: 1451 MINDIEKLEELHLQHSSILETDAHIEREFREIQDECEQEDSERKGADVVGDXXXXXXXXX 1630
               ++++LEE  L  S  L +    E +F     E    + E  G    G+         
Sbjct: 292  ---ELQRLEESELNGSDALASGMLSEEDFH---GERVNPEEEEHGGQAGGN--------- 336

Query: 1631 XXXXXXDCKESNLQEQSLSDFEESNGLETLWEHQDLIEQLKMELRKVRDTGLPTILEESE 1810
                          + +L + E+SN LETLWEHQ+LIEQLKMELRKVR TGLPTILEESE
Sbjct: 337  --------------KNNLDETEDSNRLETLWEHQELIEQLKMELRKVRATGLPTILEESE 382

Query: 1811 SPRMSEDLKPWKIDEK-FEHEDRMDELHKFYKSYRERMRKFDILNYQKMYAIGFLQLKDH 1987
            SP+M EDLKPWKID+K F+HE+RMDELHK YK Y ERMRKFDILNYQKMYAIGFLQ KD 
Sbjct: 383  SPKMMEDLKPWKIDDKKFQHEERMDELHKIYKLYSERMRKFDILNYQKMYAIGFLQSKD- 441

Query: 1988 PLQSITTRKSSTPTLTSMLSQNFLLPKRRRPEADSSIMFVRELESHLETVYVGQLCLSWE 2167
            PLQSI+ +KSS P  TS+LSQNF   +R++ E D  + F++EL S LE VYVGQLCLSWE
Sbjct: 442  PLQSISGQKSSVPAFTSLLSQNF---RRKKSETDPMVKFIKELHSDLEMVYVGQLCLSWE 498

Query: 2168 FLHWQYGKARELLESDPYEIRPYNQVAGEFQQFQVLMQR 2284
            FLHWQY +A EL ESDP  IR YN+VAGEFQQFQVLMQR
Sbjct: 499  FLHWQYERALELWESDPRGIRRYNEVAGEFQQFQVLMQR 537


>ref|XP_003551731.1| PREDICTED: uncharacterized protein LOC100785051 [Glycine max]
          Length = 767

 Score =  312 bits (799), Expect = 3e-82
 Identities = 197/511 (38%), Positives = 266/511 (52%), Gaps = 1/511 (0%)
 Frame = +2

Query: 755  GDTIASTSNKREFIPKKVLSGFIEEPNVMSFTVKEMYLNANE-VSVDNKEILDDRFLSEK 931
            GD +++++NK EF+     S F++EP   +FT KE ++++N+ + ++N    D  FLS K
Sbjct: 145  GDAVSASTNKYEFMSGTSFSHFLDEPEAENFTFKECFVHSNDALELENHVDNDFGFLSRK 204

Query: 932  DFMKHNSEREVVNEEIMNNLYSVEESENLECVVLSEAXXXXXXXXXXXXXXXXXXXXFND 1111
             F+  N +R +++E    NL S  ES + E     +A                       
Sbjct: 205  KFIPENCDRGIMSE----NLNSFTESPHKEVSEKFKAEEPMGQSVEPVVR---------- 250

Query: 1112 EIDFIDGNELCGFDSEPESVKLWDKFSVMNHMMDSNSDEFLSDGDFDSEDEPESAVELGE 1291
              +F+ G++     S+ +SV            + S  + FLSD DF +  E         
Sbjct: 251  --NFLSGDDFICSSSDSDSV------------VSSLGEGFLSDTDFGTTTE--------- 287

Query: 1292 KKVEIMEDTQNSEEIHLETQGILDQEGFELSDRTLPFENPTGHESTDIDEVLEMINDIEK 1471
                                   D  G   ++  L F +   +E  D+            
Sbjct: 288  ----------------------FDTLGSNATEEDLDFGDEKNYEDLDVG----------- 314

Query: 1472 LEELHLQHSSILETDAHIEREFREIQDECEQEDSERKGADVVGDXXXXXXXXXXXXXXXD 1651
                        E D  I  E   +++EC  E S  K ++                    
Sbjct: 315  -----YDPDDFTEEDEDIMDELGNLEEECRLEKSSGKNSE---------DSNSINSKHEQ 360

Query: 1652 CKESNLQEQSLSDFEESNGLETLWEHQDLIEQLKMELRKVRDTGLPTILEESESPRMSED 1831
              + N Q  +  D E+SN  +TLWEHQDLIEQLKMEL+KVR TGLPTILE+SESPR+ ED
Sbjct: 361  SVKPNSQALATIDLEDSNRFDTLWEHQDLIEQLKMELKKVRATGLPTILEDSESPRIMED 420

Query: 1832 LKPWKIDEKFEHEDRMDELHKFYKSYRERMRKFDILNYQKMYAIGFLQLKDHPLQSITTR 2011
            LKPWKIDEK +H    +EL KFY+SYRERMRKFDILNYQKMYA+G LQ KD PLQS +TR
Sbjct: 421  LKPWKIDEKLQHGSTTNELPKFYRSYRERMRKFDILNYQKMYALGVLQSKD-PLQSFSTR 479

Query: 2012 KSSTPTLTSMLSQNFLLPKRRRPEADSSIMFVRELESHLETVYVGQLCLSWEFLHWQYGK 2191
            K+ +P  TS+L++ F L +R+  E D    F+REL S LE VYVGQLCLSWEFL W+Y K
Sbjct: 480  KNPSPAFTSILTRGFRLSRRKNTEVDPMRKFIRELYSDLEMVYVGQLCLSWEFLQWEYEK 539

Query: 2192 ARELLESDPYEIRPYNQVAGEFQQFQVLMQR 2284
            A +L ESD Y +  +N+VAGEFQQF VL+QR
Sbjct: 540  ALKLWESDQYGLLRFNEVAGEFQQFHVLLQR 570


>emb|CBI22220.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  311 bits (798), Expect = 4e-82
 Identities = 191/390 (48%), Positives = 234/390 (60%), Gaps = 1/390 (0%)
 Frame = +2

Query: 1118 DFIDGNELCGFDSEPESVKLWDKFSVMNHMMDSNSDEFLSDGDFDSEDEPESAVELGEKK 1297
            +F+ G E+  F  EPE+V     F+V     +SN D    + DF  ++    AV  GE  
Sbjct: 141  EFMHGKEVSSFMEEPEAVS----FTVKELYTNSN-DGSSQENDFSQQNSEAEAVH-GEVS 194

Query: 1298 VEIMEDTQNSEEIHLETQGILDQEGFELSDRTLPFENPTGHESTDIDEVLEMINDIEKLE 1477
                       EI  +   + + E   +S++ + F +P    ++D            KLE
Sbjct: 195  -----------EISPKLDQLSENELPHVSEKEVQFLSPEDVLASD-----------SKLE 232

Query: 1478 ELHLQHSSILETDAHIEREFREIQDECEQEDSERKGADVVGDXXXXXXXXXXXXXXXDCK 1657
            E  L  S  L +    E +F     E    + E  G    G+                  
Sbjct: 233  ESELNGSDALASGMLSEEDFH---GERVNPEEEEHGGQAGGN------------------ 271

Query: 1658 ESNLQEQSLSDFEESNGLETLWEHQDLIEQLKMELRKVRDTGLPTILEESESPRMSEDLK 1837
                 + +L + E+SN LETLWEHQ+LIEQLKMELRKVR TGLPTILEESESP+M EDLK
Sbjct: 272  -----KNNLDETEDSNRLETLWEHQELIEQLKMELRKVRATGLPTILEESESPKMMEDLK 326

Query: 1838 PWKIDEK-FEHEDRMDELHKFYKSYRERMRKFDILNYQKMYAIGFLQLKDHPLQSITTRK 2014
            PWKID+K F+HE+RMDELHK YK Y ERMRKFDILNYQKMYAIGFLQ KD PLQSI+ +K
Sbjct: 327  PWKIDDKKFQHEERMDELHKIYKLYSERMRKFDILNYQKMYAIGFLQSKD-PLQSISGQK 385

Query: 2015 SSTPTLTSMLSQNFLLPKRRRPEADSSIMFVRELESHLETVYVGQLCLSWEFLHWQYGKA 2194
            SS P  TS+LSQNF   +R++ E D  + F++EL S LE VYVGQLCLSWEFLHWQY +A
Sbjct: 386  SSVPAFTSLLSQNF---RRKKSETDPMVKFIKELHSDLEMVYVGQLCLSWEFLHWQYERA 442

Query: 2195 RELLESDPYEIRPYNQVAGEFQQFQVLMQR 2284
             EL ESDP  IR YN+VAGEFQQFQVLMQR
Sbjct: 443  LELWESDPRGIRRYNEVAGEFQQFQVLMQR 472



 Score = 94.7 bits (234), Expect = 9e-17
 Identities = 94/385 (24%), Positives = 160/385 (41%), Gaps = 31/385 (8%)
 Frame = +2

Query: 449  GTVNEFFWEKMVFIASSFWFSVSTFMVTLFRSITNSFFRYGIDVSTEKECFKAN------ 610
            G+VN+F ++KMV  A SFW SVST+++ LF  I   FFR+  D  +  +    N      
Sbjct: 2    GSVNQFLYQKMVLFAQSFWVSVSTYLLPLFSFIFRYFFRFQEDDKSGTKNLNLNWNGSEN 61

Query: 611  -----------------DVVTNEGNEIEVLDYEDSDNDTLGEKETXXXXXXXXXXXXYND 739
                             +  T +G E E+   +  D++   E               +  
Sbjct: 62   PPQEIKQTDLNCADPDKEAETEDGEEAELDAVKLEDSEVEEETPKSFLSFKFQAYEEFAK 121

Query: 740  SVSSIGDTIA---STSNKREFIPKKVLSGFIEEPNVMSFTVKEMYLNANEVSVDNKEILD 910
            ++   GD ++    ++NK EF+  K +S F+EEP  +SFTVKE+Y N+N+ S        
Sbjct: 122  TLGGNGDPVSPETMSTNKHEFMHGKEVSSFMEEPEAVSFTVKELYTNSNDGS-------- 173

Query: 911  DRFLSEKDFMKHNSEREVVNEEIMNNLYSVEESENLECVVLSEAXXXXXXXXXXXXXXXX 1090
                 E DF + NSE E V+ E+      +++    E   +SE                 
Sbjct: 174  ---SQENDFSQQNSEAEAVHGEVSEISPKLDQLSENELPHVSE----------------- 213

Query: 1091 XXXXFNDEIDFIDGNELCGFDSEPESVKLWDKFSVMNHMMDSNSDEFLSDGDFDSE---- 1258
                   E+ F+   ++   DS+ E  +L        +  D+ +   LS+ DF  E    
Sbjct: 214  ------KEVQFLSPEDVLASDSKLEESEL--------NGSDALASGMLSEEDFHGERVNP 259

Query: 1259 DEPESAVELGEKKVEIME-DTQNSEEIHLETQGILDQEGFELSDRTLPFENPTGHESTDI 1435
            +E E   + G  K  + E +  N  E   E Q +++Q   EL  +      PT  E ++ 
Sbjct: 260  EEEEHGGQAGGNKNNLDETEDSNRLETLWEHQELIEQLKMELR-KVRATGLPTILEESES 318

Query: 1436 DEVLEMINDIEKLEELHLQHSSILE 1510
             +++E +    K+++   QH   ++
Sbjct: 319  PKMMEDLKP-WKIDDKKFQHEERMD 342


>ref|XP_002331501.1| predicted protein [Populus trichocarpa] gi|222873837|gb|EEF10968.1|
            predicted protein [Populus trichocarpa]
          Length = 519

 Score =  309 bits (791), Expect = 2e-81
 Identities = 159/228 (69%), Positives = 180/228 (78%), Gaps = 18/228 (7%)
 Frame = +2

Query: 1655 KESNLQEQSLS---DFEESNGLETLWEHQDLIEQLKMELRKVRDTGLPTILEESESPRMS 1825
            KES  + +S S   D E+SNGLETLWEHQDLIEQLKMEL+KVR TGLPTILEE ESP++ 
Sbjct: 99   KESESEAESNSSAADSEDSNGLETLWEHQDLIEQLKMELKKVRATGLPTILEEDESPKIM 158

Query: 1826 EDLKPWKIDEKFEHEDRMDELHKFYKSYRERMRKFDILNYQKMYA--------------- 1960
            EDLKPWKIDEKF+HEDRM ELHKFYKSYRERMRKFDILNYQKMYA               
Sbjct: 159  EDLKPWKIDEKFQHEDRMGELHKFYKSYRERMRKFDILNYQKMYAMSKLHCLVPRASSQS 218

Query: 1961 IGFLQLKDHPLQSITTRKSSTPTLTSMLSQNFLLPKRRRPEADSSIMFVRELESHLETVY 2140
            IGFLQ KD PL+SIT R++S P LTS+LSQ FLL KR++  +D  + F+REL + LE VY
Sbjct: 219  IGFLQSKD-PLKSITRREASAPALTSLLSQKFLLSKRKKSSSDPMVNFIRELHNDLEVVY 277

Query: 2141 VGQLCLSWEFLHWQYGKARELLESDPYEIRPYNQVAGEFQQFQVLMQR 2284
            VGQLCLSWE LHWQY KA EL +SDPY +R YN+VAGEFQQFQVL+QR
Sbjct: 278  VGQLCLSWEILHWQYEKALELWDSDPYGMRLYNEVAGEFQQFQVLLQR 325



 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
 Frame = +2

Query: 656  EDSDNDTLGEKETXXXXXXXXXXXXYNDSVSSIGDTIASTS-NKREFIPKKVLSGFIEEP 832
            E  + D L EKET              +    +  ++  TS NK EF+ ++  S ++E+P
Sbjct: 2    ETKEVDELEEKETPKFFFKFQFQTYREEDEPVLLSSVPPTSTNKYEFLSERDFSHYLEKP 61

Query: 833  NVMSFTVKEMYLNANEVSVDNKEILDDRFLSEKDFMKHNSEREVVNEEIMNNLYSVEESE 1012
             V+S TVKE+Y  +N     NK+I++D  LS+KDF +  SE E    E  ++    E+S 
Sbjct: 62   EVVSLTVKELYAGSNGEFFANKKIMEDGVLSDKDFAEKESESEA---ESNSSAADSEDSN 118

Query: 1013 NLE 1021
             LE
Sbjct: 119  GLE 121


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