BLASTX nr result
ID: Coptis24_contig00010103
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00010103
(2286 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534059.1| 60S ribosomal protein L34, putative [Ricinus... 394 e-107
ref|XP_002278235.1| PREDICTED: uncharacterized protein LOC100268... 390 e-106
ref|XP_003551731.1| PREDICTED: uncharacterized protein LOC100785... 312 3e-82
emb|CBI22220.3| unnamed protein product [Vitis vinifera] 311 4e-82
ref|XP_002331501.1| predicted protein [Populus trichocarpa] gi|2... 309 2e-81
>ref|XP_002534059.1| 60S ribosomal protein L34, putative [Ricinus communis]
gi|223525913|gb|EEF28325.1| 60S ribosomal protein L34,
putative [Ricinus communis]
Length = 764
Score = 394 bits (1013), Expect = e-107
Identities = 252/625 (40%), Positives = 358/625 (57%), Gaps = 13/625 (2%)
Frame = +2
Query: 449 GTVNEFFWEKMVFIASSFWFSVSTFMVTLFRSITNSFFRYGIDVSTEKECFKANDVVTNE 628
G+VN F +K+VF SFW SVST + LF ++ + R D +++ ND+ E
Sbjct: 2 GSVNVFLRKKLVFCVDSFWVSVSTLFLALFHFLSGAICRVKDDDFSQR-----NDLSCTE 56
Query: 629 GNEIEVLDYEDS-DNDTLG------EKETXXXXXXXXXXXXYNDSVSSIGDTIAS-TSNK 784
E V ++ED+ +ND L E+ET + + +++++ T+NK
Sbjct: 57 -QEANVTEFEDTKENDVLAKEEEEEEEETPQFFFKFQYQTYGENHKPFVSNSVSTATTNK 115
Query: 785 REFIPKKVLSGFIEEPNVMSFTVKEMYLNANEVSVDNKEILDDRFLSEK----DFMKHNS 952
+ K S ++E+P V S TVKE+Y ++ +NKE++DDR L E+ +F+ S
Sbjct: 116 YAVLSSKGSSLYLEKPEVYSLTVKELYADS---VANNKEVIDDRILPEEKAETEFIYEES 172
Query: 953 EREVVNEEIMNNLYSVEESENLECVVLSEAXXXXXXXXXXXXXXXXXXXXFNDEIDFIDG 1132
+ EV E + SVE S + ++E F E DF+
Sbjct: 173 KEEVT--EKLEAETSVEGSNLGNGMAINEEKNNAWSDHQVSRDDDK----FLSEKDFV-- 224
Query: 1133 NELCGFDSEPESVKLWDKFSVMNHMMDSNSDEFLSDGDFDSEDEPESAVELGEKKVEIME 1312
+D++ +S + V+N + S + FLSD +F+ E V L + E+ E
Sbjct: 225 ---APYDTDSDSDSITSSHEVINRFVPSIREGFLSDKNFEDAFE---FVTLKGTERELAE 278
Query: 1313 DTQNSEEIHLETQGILDQEGFELSDRTLPFENPTGHESTDIDEV-LEMINDIEKLEELHL 1489
+ EE+ L+ + + L + + +G++ D DE +++ +++ LE+ ++
Sbjct: 279 ELTEEEEMELD-------DIYNLQNCS------SGYDPDDFDEEDSDILEELKNLEDSNM 325
Query: 1490 QHSSILETDAHIEREFREIQDECEQEDSERKGADVVGDXXXXXXXXXXXXXXXDCKESNL 1669
Q+S + + E Q+E + D E K D ++S
Sbjct: 326 QNSDEKDVQGNDNLE----QEEANRNDKETKEC------------------LDDSEKSGS 363
Query: 1670 QEQSLSDFEESNGLETLWEHQDLIEQLKMELRKVRDTGLPTILEESESPRMSEDLKPWKI 1849
Q+ S D E+SNGLE+LWEHQ+LIEQLKMEL+KVR TGLPTILEE ESP++ EDLKPWKI
Sbjct: 364 QDSSAWDAEDSNGLESLWEHQELIEQLKMELKKVRATGLPTILEEDESPKIMEDLKPWKI 423
Query: 1850 DEKFEHEDRMDELHKFYKSYRERMRKFDILNYQKMYAIGFLQLKDHPLQSITTRKSSTPT 2029
DEKF+ EDRM ELHKFYKSYRERMRKFDILNYQKMYA+GFLQ KD PL+S+++ K STP
Sbjct: 424 DEKFQREDRMGELHKFYKSYRERMRKFDILNYQKMYALGFLQSKD-PLKSLSSNKVSTPA 482
Query: 2030 LTSMLSQNFLLPKRRRPEADSSIMFVRELESHLETVYVGQLCLSWEFLHWQYGKARELLE 2209
LTS+LSQ FLL KR++ +D + F++EL S LE +YVGQ+CLSWE LHWQY KA E+ +
Sbjct: 483 LTSLLSQKFLLGKRKKSSSDPMMSFIKELHSDLEMIYVGQMCLSWEILHWQYEKALEIWD 542
Query: 2210 SDPYEIRPYNQVAGEFQQFQVLMQR 2284
SDPY IR YN+VAGEFQQFQVLMQR
Sbjct: 543 SDPYGIRCYNEVAGEFQQFQVLMQR 567
>ref|XP_002278235.1| PREDICTED: uncharacterized protein LOC100268097 [Vitis vinifera]
Length = 728
Score = 390 bits (1003), Expect = e-106
Identities = 252/639 (39%), Positives = 340/639 (53%), Gaps = 27/639 (4%)
Frame = +2
Query: 449 GTVNEFFWEKMVFIASSFWFSVSTFMVTLFRSITNSFFRYGIDVSTEKECFKAN------ 610
G+VN+F ++KMV A SFW SVST+++ LF I FFR+ D + + N
Sbjct: 2 GSVNQFLYQKMVLFAQSFWVSVSTYLLPLFSFIFRYFFRFQEDDKSGTKNLNLNWNGSEN 61
Query: 611 -----------------DVVTNEGNEIEVLDYEDSDNDTLGEKETXXXXXXXXXXXXYND 739
+ T +G E E+ + D++ E +
Sbjct: 62 PPQEIKQTDLNCADPDKEAETEDGEEAELDAVKLEDSEVEEETPKSFLSFKFQAYEEFAK 121
Query: 740 SVSSIGDTIAS---TSNKREFIPKKVLSGFIEEPNVMSFTVKEMYLNANEVSVDNKEILD 910
++ GD ++ ++NK EF+ K +S F+EEP +SFTVKE+Y N+N+ S
Sbjct: 122 TLGGNGDPVSPETMSTNKHEFMHGKEVSSFMEEPEAVSFTVKELYTNSNDGSSQ------ 175
Query: 911 DRFLSEKDFMKHNSEREVVNEEIMNNLYSVEESENLECVVLSEAXXXXXXXXXXXXXXXX 1090
E DF + NSE E V+ E+ +++ E +SE
Sbjct: 176 -----ENDFSQQNSEAEAVHGEVSEISPKLDQLSENELPHVSEK---------------- 214
Query: 1091 XXXXFNDEIDFIDGNELCGFDSEPESVKLWDKFSVMNHMMDSNSDEFLSDGDFDSEDEPE 1270
E+ F+ ++ DS+ E W ++ +DSNS+EFLSD DF+ E +
Sbjct: 215 -------EVQFLSPEDVLASDSKSEESTNWSPD--LSQSVDSNSNEFLSDKDFE---ELD 262
Query: 1271 SAVELGEKKVEIMEDTQNSEEIHLETQGILDQEGFELSDRTLPFENPTGHESTDIDEVLE 1450
+ +++G +++++ E +G+L G E D +
Sbjct: 263 NLIDIGGQQIDLRE----------LMKGVL------------------GTEDDDFHQ--- 291
Query: 1451 MINDIEKLEELHLQHSSILETDAHIEREFREIQDECEQEDSERKGADVVGDXXXXXXXXX 1630
++++LEE L S L + E +F E + E G G+
Sbjct: 292 ---ELQRLEESELNGSDALASGMLSEEDFH---GERVNPEEEEHGGQAGGN--------- 336
Query: 1631 XXXXXXDCKESNLQEQSLSDFEESNGLETLWEHQDLIEQLKMELRKVRDTGLPTILEESE 1810
+ +L + E+SN LETLWEHQ+LIEQLKMELRKVR TGLPTILEESE
Sbjct: 337 --------------KNNLDETEDSNRLETLWEHQELIEQLKMELRKVRATGLPTILEESE 382
Query: 1811 SPRMSEDLKPWKIDEK-FEHEDRMDELHKFYKSYRERMRKFDILNYQKMYAIGFLQLKDH 1987
SP+M EDLKPWKID+K F+HE+RMDELHK YK Y ERMRKFDILNYQKMYAIGFLQ KD
Sbjct: 383 SPKMMEDLKPWKIDDKKFQHEERMDELHKIYKLYSERMRKFDILNYQKMYAIGFLQSKD- 441
Query: 1988 PLQSITTRKSSTPTLTSMLSQNFLLPKRRRPEADSSIMFVRELESHLETVYVGQLCLSWE 2167
PLQSI+ +KSS P TS+LSQNF +R++ E D + F++EL S LE VYVGQLCLSWE
Sbjct: 442 PLQSISGQKSSVPAFTSLLSQNF---RRKKSETDPMVKFIKELHSDLEMVYVGQLCLSWE 498
Query: 2168 FLHWQYGKARELLESDPYEIRPYNQVAGEFQQFQVLMQR 2284
FLHWQY +A EL ESDP IR YN+VAGEFQQFQVLMQR
Sbjct: 499 FLHWQYERALELWESDPRGIRRYNEVAGEFQQFQVLMQR 537
>ref|XP_003551731.1| PREDICTED: uncharacterized protein LOC100785051 [Glycine max]
Length = 767
Score = 312 bits (799), Expect = 3e-82
Identities = 197/511 (38%), Positives = 266/511 (52%), Gaps = 1/511 (0%)
Frame = +2
Query: 755 GDTIASTSNKREFIPKKVLSGFIEEPNVMSFTVKEMYLNANE-VSVDNKEILDDRFLSEK 931
GD +++++NK EF+ S F++EP +FT KE ++++N+ + ++N D FLS K
Sbjct: 145 GDAVSASTNKYEFMSGTSFSHFLDEPEAENFTFKECFVHSNDALELENHVDNDFGFLSRK 204
Query: 932 DFMKHNSEREVVNEEIMNNLYSVEESENLECVVLSEAXXXXXXXXXXXXXXXXXXXXFND 1111
F+ N +R +++E NL S ES + E +A
Sbjct: 205 KFIPENCDRGIMSE----NLNSFTESPHKEVSEKFKAEEPMGQSVEPVVR---------- 250
Query: 1112 EIDFIDGNELCGFDSEPESVKLWDKFSVMNHMMDSNSDEFLSDGDFDSEDEPESAVELGE 1291
+F+ G++ S+ +SV + S + FLSD DF + E
Sbjct: 251 --NFLSGDDFICSSSDSDSV------------VSSLGEGFLSDTDFGTTTE--------- 287
Query: 1292 KKVEIMEDTQNSEEIHLETQGILDQEGFELSDRTLPFENPTGHESTDIDEVLEMINDIEK 1471
D G ++ L F + +E D+
Sbjct: 288 ----------------------FDTLGSNATEEDLDFGDEKNYEDLDVG----------- 314
Query: 1472 LEELHLQHSSILETDAHIEREFREIQDECEQEDSERKGADVVGDXXXXXXXXXXXXXXXD 1651
E D I E +++EC E S K ++
Sbjct: 315 -----YDPDDFTEEDEDIMDELGNLEEECRLEKSSGKNSE---------DSNSINSKHEQ 360
Query: 1652 CKESNLQEQSLSDFEESNGLETLWEHQDLIEQLKMELRKVRDTGLPTILEESESPRMSED 1831
+ N Q + D E+SN +TLWEHQDLIEQLKMEL+KVR TGLPTILE+SESPR+ ED
Sbjct: 361 SVKPNSQALATIDLEDSNRFDTLWEHQDLIEQLKMELKKVRATGLPTILEDSESPRIMED 420
Query: 1832 LKPWKIDEKFEHEDRMDELHKFYKSYRERMRKFDILNYQKMYAIGFLQLKDHPLQSITTR 2011
LKPWKIDEK +H +EL KFY+SYRERMRKFDILNYQKMYA+G LQ KD PLQS +TR
Sbjct: 421 LKPWKIDEKLQHGSTTNELPKFYRSYRERMRKFDILNYQKMYALGVLQSKD-PLQSFSTR 479
Query: 2012 KSSTPTLTSMLSQNFLLPKRRRPEADSSIMFVRELESHLETVYVGQLCLSWEFLHWQYGK 2191
K+ +P TS+L++ F L +R+ E D F+REL S LE VYVGQLCLSWEFL W+Y K
Sbjct: 480 KNPSPAFTSILTRGFRLSRRKNTEVDPMRKFIRELYSDLEMVYVGQLCLSWEFLQWEYEK 539
Query: 2192 ARELLESDPYEIRPYNQVAGEFQQFQVLMQR 2284
A +L ESD Y + +N+VAGEFQQF VL+QR
Sbjct: 540 ALKLWESDQYGLLRFNEVAGEFQQFHVLLQR 570
>emb|CBI22220.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 311 bits (798), Expect = 4e-82
Identities = 191/390 (48%), Positives = 234/390 (60%), Gaps = 1/390 (0%)
Frame = +2
Query: 1118 DFIDGNELCGFDSEPESVKLWDKFSVMNHMMDSNSDEFLSDGDFDSEDEPESAVELGEKK 1297
+F+ G E+ F EPE+V F+V +SN D + DF ++ AV GE
Sbjct: 141 EFMHGKEVSSFMEEPEAVS----FTVKELYTNSN-DGSSQENDFSQQNSEAEAVH-GEVS 194
Query: 1298 VEIMEDTQNSEEIHLETQGILDQEGFELSDRTLPFENPTGHESTDIDEVLEMINDIEKLE 1477
EI + + + E +S++ + F +P ++D KLE
Sbjct: 195 -----------EISPKLDQLSENELPHVSEKEVQFLSPEDVLASD-----------SKLE 232
Query: 1478 ELHLQHSSILETDAHIEREFREIQDECEQEDSERKGADVVGDXXXXXXXXXXXXXXXDCK 1657
E L S L + E +F E + E G G+
Sbjct: 233 ESELNGSDALASGMLSEEDFH---GERVNPEEEEHGGQAGGN------------------ 271
Query: 1658 ESNLQEQSLSDFEESNGLETLWEHQDLIEQLKMELRKVRDTGLPTILEESESPRMSEDLK 1837
+ +L + E+SN LETLWEHQ+LIEQLKMELRKVR TGLPTILEESESP+M EDLK
Sbjct: 272 -----KNNLDETEDSNRLETLWEHQELIEQLKMELRKVRATGLPTILEESESPKMMEDLK 326
Query: 1838 PWKIDEK-FEHEDRMDELHKFYKSYRERMRKFDILNYQKMYAIGFLQLKDHPLQSITTRK 2014
PWKID+K F+HE+RMDELHK YK Y ERMRKFDILNYQKMYAIGFLQ KD PLQSI+ +K
Sbjct: 327 PWKIDDKKFQHEERMDELHKIYKLYSERMRKFDILNYQKMYAIGFLQSKD-PLQSISGQK 385
Query: 2015 SSTPTLTSMLSQNFLLPKRRRPEADSSIMFVRELESHLETVYVGQLCLSWEFLHWQYGKA 2194
SS P TS+LSQNF +R++ E D + F++EL S LE VYVGQLCLSWEFLHWQY +A
Sbjct: 386 SSVPAFTSLLSQNF---RRKKSETDPMVKFIKELHSDLEMVYVGQLCLSWEFLHWQYERA 442
Query: 2195 RELLESDPYEIRPYNQVAGEFQQFQVLMQR 2284
EL ESDP IR YN+VAGEFQQFQVLMQR
Sbjct: 443 LELWESDPRGIRRYNEVAGEFQQFQVLMQR 472
Score = 94.7 bits (234), Expect = 9e-17
Identities = 94/385 (24%), Positives = 160/385 (41%), Gaps = 31/385 (8%)
Frame = +2
Query: 449 GTVNEFFWEKMVFIASSFWFSVSTFMVTLFRSITNSFFRYGIDVSTEKECFKAN------ 610
G+VN+F ++KMV A SFW SVST+++ LF I FFR+ D + + N
Sbjct: 2 GSVNQFLYQKMVLFAQSFWVSVSTYLLPLFSFIFRYFFRFQEDDKSGTKNLNLNWNGSEN 61
Query: 611 -----------------DVVTNEGNEIEVLDYEDSDNDTLGEKETXXXXXXXXXXXXYND 739
+ T +G E E+ + D++ E +
Sbjct: 62 PPQEIKQTDLNCADPDKEAETEDGEEAELDAVKLEDSEVEEETPKSFLSFKFQAYEEFAK 121
Query: 740 SVSSIGDTIA---STSNKREFIPKKVLSGFIEEPNVMSFTVKEMYLNANEVSVDNKEILD 910
++ GD ++ ++NK EF+ K +S F+EEP +SFTVKE+Y N+N+ S
Sbjct: 122 TLGGNGDPVSPETMSTNKHEFMHGKEVSSFMEEPEAVSFTVKELYTNSNDGS-------- 173
Query: 911 DRFLSEKDFMKHNSEREVVNEEIMNNLYSVEESENLECVVLSEAXXXXXXXXXXXXXXXX 1090
E DF + NSE E V+ E+ +++ E +SE
Sbjct: 174 ---SQENDFSQQNSEAEAVHGEVSEISPKLDQLSENELPHVSE----------------- 213
Query: 1091 XXXXFNDEIDFIDGNELCGFDSEPESVKLWDKFSVMNHMMDSNSDEFLSDGDFDSE---- 1258
E+ F+ ++ DS+ E +L + D+ + LS+ DF E
Sbjct: 214 ------KEVQFLSPEDVLASDSKLEESEL--------NGSDALASGMLSEEDFHGERVNP 259
Query: 1259 DEPESAVELGEKKVEIME-DTQNSEEIHLETQGILDQEGFELSDRTLPFENPTGHESTDI 1435
+E E + G K + E + N E E Q +++Q EL + PT E ++
Sbjct: 260 EEEEHGGQAGGNKNNLDETEDSNRLETLWEHQELIEQLKMELR-KVRATGLPTILEESES 318
Query: 1436 DEVLEMINDIEKLEELHLQHSSILE 1510
+++E + K+++ QH ++
Sbjct: 319 PKMMEDLKP-WKIDDKKFQHEERMD 342
>ref|XP_002331501.1| predicted protein [Populus trichocarpa] gi|222873837|gb|EEF10968.1|
predicted protein [Populus trichocarpa]
Length = 519
Score = 309 bits (791), Expect = 2e-81
Identities = 159/228 (69%), Positives = 180/228 (78%), Gaps = 18/228 (7%)
Frame = +2
Query: 1655 KESNLQEQSLS---DFEESNGLETLWEHQDLIEQLKMELRKVRDTGLPTILEESESPRMS 1825
KES + +S S D E+SNGLETLWEHQDLIEQLKMEL+KVR TGLPTILEE ESP++
Sbjct: 99 KESESEAESNSSAADSEDSNGLETLWEHQDLIEQLKMELKKVRATGLPTILEEDESPKIM 158
Query: 1826 EDLKPWKIDEKFEHEDRMDELHKFYKSYRERMRKFDILNYQKMYA--------------- 1960
EDLKPWKIDEKF+HEDRM ELHKFYKSYRERMRKFDILNYQKMYA
Sbjct: 159 EDLKPWKIDEKFQHEDRMGELHKFYKSYRERMRKFDILNYQKMYAMSKLHCLVPRASSQS 218
Query: 1961 IGFLQLKDHPLQSITTRKSSTPTLTSMLSQNFLLPKRRRPEADSSIMFVRELESHLETVY 2140
IGFLQ KD PL+SIT R++S P LTS+LSQ FLL KR++ +D + F+REL + LE VY
Sbjct: 219 IGFLQSKD-PLKSITRREASAPALTSLLSQKFLLSKRKKSSSDPMVNFIRELHNDLEVVY 277
Query: 2141 VGQLCLSWEFLHWQYGKARELLESDPYEIRPYNQVAGEFQQFQVLMQR 2284
VGQLCLSWE LHWQY KA EL +SDPY +R YN+VAGEFQQFQVL+QR
Sbjct: 278 VGQLCLSWEILHWQYEKALELWDSDPYGMRLYNEVAGEFQQFQVLLQR 325
Score = 62.8 bits (151), Expect = 4e-07
Identities = 41/123 (33%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Frame = +2
Query: 656 EDSDNDTLGEKETXXXXXXXXXXXXYNDSVSSIGDTIASTS-NKREFIPKKVLSGFIEEP 832
E + D L EKET + + ++ TS NK EF+ ++ S ++E+P
Sbjct: 2 ETKEVDELEEKETPKFFFKFQFQTYREEDEPVLLSSVPPTSTNKYEFLSERDFSHYLEKP 61
Query: 833 NVMSFTVKEMYLNANEVSVDNKEILDDRFLSEKDFMKHNSEREVVNEEIMNNLYSVEESE 1012
V+S TVKE+Y +N NK+I++D LS+KDF + SE E E ++ E+S
Sbjct: 62 EVVSLTVKELYAGSNGEFFANKKIMEDGVLSDKDFAEKESESEA---ESNSSAADSEDSN 118
Query: 1013 NLE 1021
LE
Sbjct: 119 GLE 121