BLASTX nr result

ID: Coptis24_contig00010097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010097
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853...   119   3e-25
emb|CAN75336.1| hypothetical protein VITISV_012698 [Vitis vinifera]   119   3e-25
ref|XP_002322495.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_003616106.1| Nibrin [Medicago truncatula] gi|355517441|gb...   113   1e-23
ref|XP_003544952.1| PREDICTED: uncharacterized protein LOC100783...   110   9e-23

>ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853048 [Vitis vinifera]
           gi|296083807|emb|CBI24024.3| unnamed protein product
           [Vitis vinifera]
          Length = 595

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/94 (60%), Positives = 71/94 (75%)
 Frame = -1

Query: 367 NSDIVYSQELIVRDTNASAPVHSKNIGVINFKCFRKRETLSGNSFNNLVPFSKKLYRESD 188
           N D++YSQ+LIVRD N      S    ++NFKCFRK +T SGNSFNNL+PF+K  Y+ESD
Sbjct: 487 NPDVLYSQDLIVRDINLLTSFSSTKNRIVNFKCFRKAKTQSGNSFNNLIPFAKYPYKESD 546

Query: 187 YANEEVAEHVREEKKRKQIEAIAEDLFNNTKATR 86
             ++EV + V+EEKKRKQ+EAIAEDLFNN K  R
Sbjct: 547 NGSDEVMQSVKEEKKRKQMEAIAEDLFNNEKGRR 580


>emb|CAN75336.1| hypothetical protein VITISV_012698 [Vitis vinifera]
          Length = 280

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/94 (60%), Positives = 71/94 (75%)
 Frame = -1

Query: 367 NSDIVYSQELIVRDTNASAPVHSKNIGVINFKCFRKRETLSGNSFNNLVPFSKKLYRESD 188
           N D++YSQ+LIVRD N      S    ++NFKCFRK +T SGNSFNNL+PF+K  Y+ESD
Sbjct: 172 NPDVLYSQDLIVRDINLLTSFSSTKNRIVNFKCFRKAKTQSGNSFNNLIPFAKYPYKESD 231

Query: 187 YANEEVAEHVREEKKRKQIEAIAEDLFNNTKATR 86
             ++EV + V+EEKKRKQ+EAIAEDLFNN K  R
Sbjct: 232 NGSDEVMQSVKEEKKRKQMEAIAEDLFNNEKGRR 265


>ref|XP_002322495.1| predicted protein [Populus trichocarpa] gi|222869491|gb|EEF06622.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/95 (61%), Positives = 72/95 (75%), Gaps = 1/95 (1%)
 Frame = -1

Query: 367 NSDIVYSQELIVRDTNASAPVHSK-NIGVINFKCFRKRETLSGNSFNNLVPFSKKLYRES 191
           NSDI+YSQ+LI+RD N  A + S  N  V+NFK FRK  T SGNSFNNL+PFSK  Y++ 
Sbjct: 38  NSDIIYSQDLIIRDLNLPAQISSTPNNEVLNFKRFRKGNTQSGNSFNNLIPFSKYPYKDF 97

Query: 190 DYANEEVAEHVREEKKRKQIEAIAEDLFNNTKATR 86
           DY N+++ E V+EEK+RKQ+EAIAEDLFN  K  R
Sbjct: 98  DYGNQDMLESVKEEKRRKQMEAIAEDLFNTEKGRR 132


>ref|XP_003616106.1| Nibrin [Medicago truncatula] gi|355517441|gb|AES99064.1| Nibrin
           [Medicago truncatula]
          Length = 571

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/99 (60%), Positives = 74/99 (74%), Gaps = 5/99 (5%)
 Frame = -1

Query: 367 NSDIVYSQELIVRDTN-----ASAPVHSKNIGVINFKCFRKRETLSGNSFNNLVPFSKKL 203
           NSD++YSQ LIVRD N     +SAP    N  V NFK FRK ET SGNSF+NLVPF+K  
Sbjct: 464 NSDVIYSQNLIVRDINKLTNRSSAP----NSSVPNFKRFRKPETQSGNSFSNLVPFAKYP 519

Query: 202 YRESDYANEEVAEHVREEKKRKQIEAIAEDLFNNTKATR 86
           Y++SDY  +E AE+V+EEK+RKQ EA+A+DLFNN KA +
Sbjct: 520 YKDSDYGKDETAEYVKEEKRRKQREAVADDLFNNQKAKK 558


>ref|XP_003544952.1| PREDICTED: uncharacterized protein LOC100783205 [Glycine max]
          Length = 555

 Score =  110 bits (276), Expect = 9e-23
 Identities = 58/98 (59%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
 Frame = -1

Query: 367 NSDIVYSQELIVRDTNASAPVHSK-NIGVINFKCFRKRETLSGNSFNNLVPFSKKLYRES 191
           NSDIVYSQ LIVRDTN    + +  N  V NFK FRK +T SGNSF NLVPF K  Y++S
Sbjct: 443 NSDIVYSQYLIVRDTNIRTSISTAPNSSVPNFKRFRKAQTQSGNSFENLVPFGKYPYKDS 502

Query: 190 DYANEEVAEHVREEKKRKQIEAIAEDLFNNTKATRGKA 77
           D  NE+V E V+EEK+RK++EA+A+D+FNN    RG A
Sbjct: 503 DCGNEDVTELVKEEKRRKKMEAMADDMFNNEARKRGTA 540


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