BLASTX nr result

ID: Coptis24_contig00010093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010093
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267404.1| PREDICTED: two-component response regulator ...   133   2e-29
emb|CBI40157.3| unnamed protein product [Vitis vinifera]              131   5e-29
ref|XP_002273990.1| PREDICTED: two-component response regulator ...   131   5e-29
ref|XP_002532588.1| two-component system sensor histidine kinase...   130   1e-28
ref|XP_002513063.1| Two-component response regulator ARR8, putat...   130   1e-28

>ref|XP_002267404.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
          Length = 220

 Score =  133 bits (334), Expect = 2e-29
 Identities = 69/93 (74%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
 Frame = -2

Query: 374 PPSV-PSALHQEMEVNLVITDYCMPGMTGYDXXXXXXXXXXXKDIPVVIMSSENVPSRIS 198
           PPS+ PS   QEMEVNL+ITDYCMPGMTGYD           KDIPVVIMSSEN+PSRI+
Sbjct: 60  PPSLCPS---QEMEVNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRIN 116

Query: 197 RCLEEGAEEFLLKPVQLSDVKRLRPHLLKGKSR 99
           RCLEEGAE+F LKPVQLSDV +LRPHLLKGK+R
Sbjct: 117 RCLEEGAEDFFLKPVQLSDVNKLRPHLLKGKAR 149


>emb|CBI40157.3| unnamed protein product [Vitis vinifera]
          Length = 170

 Score =  131 bits (330), Expect = 5e-29
 Identities = 68/93 (73%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = -2

Query: 374 PPSV-PSALHQEMEVNLVITDYCMPGMTGYDXXXXXXXXXXXKDIPVVIMSSENVPSRIS 198
           PPS+ PS   QEMEVNL+ITDYCMPGMTGYD           KDIPVVIMSSEN+PSRI+
Sbjct: 60  PPSLCPS---QEMEVNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRIN 116

Query: 197 RCLEEGAEEFLLKPVQLSDVKRLRPHLLKGKSR 99
           RCLEEGAE+F LKPVQLSDV +LRPHLLKGK +
Sbjct: 117 RCLEEGAEDFFLKPVQLSDVNKLRPHLLKGKKK 149


>ref|XP_002273990.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
          Length = 218

 Score =  131 bits (330), Expect = 5e-29
 Identities = 63/91 (69%), Positives = 73/91 (80%)
 Frame = -2

Query: 371 PSVPSALHQEMEVNLVITDYCMPGMTGYDXXXXXXXXXXXKDIPVVIMSSENVPSRISRC 192
           PSV    HQE+EVNL+ITDYCMPGMTGYD           ++IPVVIMSSENVPSRI+RC
Sbjct: 58  PSVSPNSHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRC 117

Query: 191 LEEGAEEFLLKPVQLSDVKRLRPHLLKGKSR 99
           LEEGAEEF LKPVQ+SDV RL+PH++K KS+
Sbjct: 118 LEEGAEEFFLKPVQISDVNRLKPHMMKAKSK 148


>ref|XP_002532588.1| two-component system sensor histidine kinase/response regulator,
           putative [Ricinus communis] gi|223527676|gb|EEF29785.1|
           two-component system sensor histidine kinase/response
           regulator, putative [Ricinus communis]
          Length = 221

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/91 (70%), Positives = 73/91 (80%)
 Frame = -2

Query: 371 PSVPSALHQEMEVNLVITDYCMPGMTGYDXXXXXXXXXXXKDIPVVIMSSENVPSRISRC 192
           PSV    HQE+EVNL+ITDYCMPGMTGYD           K+IPVVIMSSENVP+RI+RC
Sbjct: 61  PSVSPNSHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLKNIPVVIMSSENVPARITRC 120

Query: 191 LEEGAEEFLLKPVQLSDVKRLRPHLLKGKSR 99
           LEEGAEEF LKPVQLSD+ RLRPH++K KS+
Sbjct: 121 LEEGAEEFFLKPVQLSDLNRLRPHMMKTKSK 151


>ref|XP_002513063.1| Two-component response regulator ARR8, putative [Ricinus communis]
           gi|223548074|gb|EEF49566.1| Two-component response
           regulator ARR8, putative [Ricinus communis]
          Length = 197

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/84 (72%), Positives = 71/84 (84%)
 Frame = -2

Query: 350 HQEMEVNLVITDYCMPGMTGYDXXXXXXXXXXXKDIPVVIMSSENVPSRISRCLEEGAEE 171
           HQ+++VNL+ITDYCMPGMTGYD           KDIPVVIMSSENVPSRI+RCLEEGAEE
Sbjct: 78  HQDLQVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRINRCLEEGAEE 137

Query: 170 FLLKPVQLSDVKRLRPHLLKGKSR 99
           F LKPVQLSDV +L+PH++KGK+R
Sbjct: 138 FFLKPVQLSDVNKLKPHMMKGKTR 161


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