BLASTX nr result
ID: Coptis24_contig00010092
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00010092 (1617 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284120.1| PREDICTED: probable thylakoidal processing p... 330 9e-88 ref|XP_002326914.1| predicted protein [Populus trichocarpa] gi|2... 313 1e-82 ref|XP_003602967.1| Thylakoidal processing peptidase [Medicago t... 309 1e-81 ref|NP_001149530.1| LOC100283156 [Zea mays] gi|195627824|gb|ACG3... 306 1e-80 ref|XP_002879265.1| chloroplast thylakoidal processing peptidase... 301 4e-79 >ref|XP_002284120.1| PREDICTED: probable thylakoidal processing peptidase 2, chloroplastic [Vitis vinifera] gi|147810057|emb|CAN78280.1| hypothetical protein VITISV_021649 [Vitis vinifera] Length = 368 Score = 330 bits (845), Expect = 9e-88 Identities = 195/391 (49%), Positives = 245/391 (62%), Gaps = 42/391 (10%) Frame = -2 Query: 1376 MAIRVTLSYSGYLAHNLASN--------------------LCPSSKV------------S 1293 MAI++T++YSGY+A NLAS+ CPS K + Sbjct: 1 MAIKLTVTYSGYVAQNLASSAGIRVGNCRSIHECWVRSRFFCPSQKPEVDSPVPSRAYQA 60 Query: 1292 NYRLFQTTCTARSSSLVFKSNNTKYSEIGSVRCETPXXXXXXXXXXXXXXXXXXSVGRGA 1113 +YR + C A+ S+ + +T E+ C P VG + Sbjct: 61 DYRRPKANCWAKVSTSAY---STLAGEVFGDSCRNPLI-----------------VGLIS 100 Query: 1112 LGVTSTG-SSSILGGF-----KPSSIIPFFKKLKWLPSDEPFHDCESEDYFSSTKIFRDE 951 L +STG S S +G F K +SI+PF KWLP +EP DE Sbjct: 101 LMKSSTGVSESSVGVFGVSPLKATSILPFLPGSKWLPCNEPIQGSVG-----------DE 149 Query: 950 EDRERTR----KILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEP 783 D+ T+ ++++ ++ V RS+WLSKL N CSED + + TA+TVSLL S LAEP Sbjct: 150 VDKGGTQCCDVEVISKPLDRKVLERSNWLSKLLNCCSEDARAVFTAVTVSLLFRSPLAEP 209 Query: 782 RSIPSLSMYPTLDVGDRILAEKVSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIV 603 RSIPS SMYPTLDVGDRILAEKVSY FR PEV+DIVIFK P LQ+ G+S+GDVFIKRIV Sbjct: 210 RSIPSASMYPTLDVGDRILAEKVSYVFRNPEVSDIVIFKVPPILQEIGYSAGDVFIKRIV 269 Query: 602 AKEGDHVEVCDGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNW 423 AK GD+VEV +GKL+VN + Q+E++ILEPLAY M+ VLVP+GYVFV+GDNRNNSFDSHNW Sbjct: 270 AKAGDYVEVSEGKLMVNGVAQEEDFILEPLAYNMDPVLVPEGYVFVLGDNRNNSFDSHNW 329 Query: 422 GPLPIKNIVGRSLLRYWPPSKISNTIYEQQA 330 GPLPIKNIVGRS+LRYWPPSK+S+TIYE +A Sbjct: 330 GPLPIKNIVGRSVLRYWPPSKVSDTIYEPEA 360 >ref|XP_002326914.1| predicted protein [Populus trichocarpa] gi|222835229|gb|EEE73664.1| predicted protein [Populus trichocarpa] Length = 362 Score = 313 bits (801), Expect = 1e-82 Identities = 189/366 (51%), Positives = 228/366 (62%), Gaps = 20/366 (5%) Frame = -2 Query: 1376 MAIRVTLSYSGYLAHNLASNLCPSSKVSNY----RLFQ---TTCTARSSSLV-------- 1242 MAIRVT S+SGY+A NL + ++ R+F TT T +S + Sbjct: 1 MAIRVTFSFSGYVAQNLGVRVGNCRYLNECFIRSRIFASPATTTTTHNSDIEPPGPRTGT 60 Query: 1241 -FKSNNTK--YSEIGSVRCETPXXXXXXXXXXXXXXXXXXSVGRGALGVTSTGSSSI-LG 1074 F+ N K YS ++ S+ + GV+ + + + Sbjct: 61 DFRRRNLKRNYSNSAAMYSTMAGEIFGDNCKGSAIAVGLVSLMKSTAGVSCSNMGACGIS 120 Query: 1073 GFKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSSTKIFRDEEDRERTRKILNDNGEKAVG 894 FK SI+PF + +WLP +E S E DR T + + EK Sbjct: 121 PFKAVSILPFLQGSRWLPCNEAVLGSRSP-----------EVDRGGTGTV--KSVEKVSE 167 Query: 893 GRS-SWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTLDVGDRILAEK 717 +S SW S++ N CSED K + TA TVSLL S LAEPRSIPS SM PTLDVGDRILAEK Sbjct: 168 SKSRSWFSRVFNVCSEDAKAMFTAATVSLLFRSTLAEPRSIPSSSMSPTLDVGDRILAEK 227 Query: 716 VSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIVAKEGDHVEVCDGKLLVNDIIQD 537 VSY FRKPEV+DIVIFKAP LQ+ GFSSGDVFIKRIVAK GD+VEV +GKL VN ++QD Sbjct: 228 VSYVFRKPEVSDIVIFKAPPILQEFGFSSGDVFIKRIVAKAGDYVEVREGKLYVNGVVQD 287 Query: 536 EEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSLLRYWPPSKI 357 EE+I EPLAYEME VLVP+GYVFVMGDNRNNSFDSHNWGPLPIKNIVGRS+ RYWPPSK+ Sbjct: 288 EEFIKEPLAYEMELVLVPEGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSVFRYWPPSKV 347 Query: 356 SNTIYE 339 S+TIY+ Sbjct: 348 SDTIYD 353 >ref|XP_003602967.1| Thylakoidal processing peptidase [Medicago truncatula] gi|355492015|gb|AES73218.1| Thylakoidal processing peptidase [Medicago truncatula] Length = 375 Score = 309 bits (792), Expect = 1e-81 Identities = 184/398 (46%), Positives = 231/398 (58%), Gaps = 39/398 (9%) Frame = -2 Query: 1376 MAIRVTLSYSGYLAHNLASNLCPSSKVSNYRLFQTTCTARSSSLVFKSN----------- 1230 MAIRVT S+SGY+A NL S+ +V+N R Q C S +F SN Sbjct: 1 MAIRVTFSFSGYVAQNLVSSA--GVRVANSRCVQECCIL---SRLFGSNPKPDLERSGGF 55 Query: 1229 --------------------NTKYSEIGSVRCETPXXXXXXXXXXXXXXXXXXSVGRGAL 1110 +T EI S C P S GA+ Sbjct: 56 RNRNLYSDFTKPRNSPVSVYSTLAGEILSESCNNPIILGLISMMKSTAISGSTSAAMGAM 115 Query: 1109 GVTSTGSSSILGGFKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSS--------TKIFRD 954 G++ FK SSIIPF + KWLP +E + + + D Sbjct: 116 GISP---------FKTSSIIPFLQGSKWLPCNESVPTATTWEVDKGGTRIQSQPVSVSSD 166 Query: 953 EEDRERTRKILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSI 774 +E R + N NG W+SKL N CSED K + TA+TVSLL S+LAEP+SI Sbjct: 167 KESRLDLNQKENTNG---------WISKLLNVCSEDAKAVFTAVTVSLLFKSFLAEPKSI 217 Query: 773 PSLSMYPTLDVGDRILAEKVSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIVAKE 594 PS SMYPTL+VGDR+L EK S++FRKP+V+DIVIFKAP+ L+ GFSS DVFIKR+VAK Sbjct: 218 PSASMYPTLEVGDRVLTEKFSFFFRKPDVSDIVIFKAPSWLKAYGFSSSDVFIKRVVAKA 277 Query: 593 GDHVEVCDGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPL 414 GD VEV DGKLLVN + +DEE++LEPLAYE+ ++VPKG+VFVMGDNRN SFDSHNWGPL Sbjct: 278 GDVVEVRDGKLLVNGVAEDEEFVLEPLAYELAPMVVPKGHVFVMGDNRNKSFDSHNWGPL 337 Query: 413 PIKNIVGRSLLRYWPPSKISNTIYEQQAGHCNFIVSGS 300 PI+NIVGRS+ RYWPPSK+S+T+ ++ N V+ S Sbjct: 338 PIENIVGRSMFRYWPPSKVSDTVMVHKSSPGNKSVAVS 375 >ref|NP_001149530.1| LOC100283156 [Zea mays] gi|195627824|gb|ACG35742.1| peptidase/ serine-type peptidase [Zea mays] gi|238010248|gb|ACR36159.1| unknown [Zea mays] gi|414885726|tpg|DAA61740.1| TPA: peptidase/ serine-type peptidase [Zea mays] Length = 396 Score = 306 bits (783), Expect = 1e-80 Identities = 176/387 (45%), Positives = 223/387 (57%), Gaps = 41/387 (10%) Frame = -2 Query: 1376 MAIRVTLSYSGYLAHNLASNL---CPSSKVSNYRLFQTTCTARSSSLVFKSNNTKYSEIG 1206 MAIR+T+SYSGY+A NLA++L S+ S RL A +F S G Sbjct: 1 MAIRITVSYSGYVAQNLAASLGHRFSSASASGSRLLHDG--AWRPFCIFTSTRQPEQHRG 58 Query: 1205 S-------------------------------VRCETPXXXXXXXXXXXXXXXXXXSVGR 1119 S + ++P + G Sbjct: 59 SGSDRHDGGDYNHPKPQAIAAGAHSLLLTRACLSSKSPPPSLAVGLLSVLAQRTGPTPGT 118 Query: 1118 GALGVTSTGSSSILGGFKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSSTKIFRDEEDRE 939 + +GSS I GF P+S +PF + +WLP + S + ++ Sbjct: 119 TGSAASLSGSSPISLGFNPTSFLPFLQTARWLPCSDLATSSSSAPSSPPRSLAPSAPPKK 178 Query: 938 R-------TRKILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPR 780 + I +G A RS+WLS+ + CS+D K A+TV LL S LAEP+ Sbjct: 179 ALIGASTGSTGIATSSGAGAAMSRSNWLSRWVSSCSDDAKTAFAAVTVPLLYGSSLAEPK 238 Query: 779 SIPSLSMYPTLDVGDRILAEKVSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIVA 600 SIPS SMYPT DVGDRILAEKVSY FR PE++DIVIF+AP LQ G+SSGDVFIKR+VA Sbjct: 239 SIPSKSMYPTFDVGDRILAEKVSYIFRDPEISDIVIFRAPPGLQVYGYSSGDVFIKRVVA 298 Query: 599 KEGDHVEVCDGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWG 420 K GD+VEV DGKL VN ++QDE+++LEP YEME VLVP+GYVFV+GDNRNNSFDSHNWG Sbjct: 299 KGGDYVEVRDGKLFVNGVVQDEDFVLEPHNYEMEPVLVPEGYVFVLGDNRNNSFDSHNWG 358 Query: 419 PLPIKNIVGRSLLRYWPPSKISNTIYE 339 PLP++NIVGRS+LRYWPPSKI++TIYE Sbjct: 359 PLPVRNIVGRSILRYWPPSKINDTIYE 385 >ref|XP_002879265.1| chloroplast thylakoidal processing peptidase [Arabidopsis lyrata subsp. lyrata] gi|297325104|gb|EFH55524.1| chloroplast thylakoidal processing peptidase [Arabidopsis lyrata subsp. lyrata] Length = 339 Score = 301 bits (770), Expect = 4e-79 Identities = 154/259 (59%), Positives = 190/259 (73%), Gaps = 2/259 (0%) Frame = -2 Query: 1100 STGSSSILG--GFKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSSTKIFRDEEDRERTRK 927 S+ + ++LG FK SSIIPF + KW+ + E +D + D++D+E Sbjct: 89 SSTTMNVLGVSSFKASSIIPFLQGSKWMKNPP-----EVDDVDKGGTLCDDDDDKESR-- 141 Query: 926 ILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTL 747 G S W++KL N CSED K TA+TVS+L S LAEP+SIPS SMYPTL Sbjct: 142 ----------SGGSGWVNKLLNICSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTL 191 Query: 746 DVGDRILAEKVSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIVAKEGDHVEVCDG 567 DVGDR++AEKVSY+FRKPEV+DIVIFKAP L +SS DVFIKRIVA EG+ VEV DG Sbjct: 192 DVGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLDYDYSSNDVFIKRIVASEGNWVEVRDG 251 Query: 566 KLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRS 387 KLLVNDI+Q+E+++LEP++YEME + VPKGYVFV+GDNRN SFDSHNWGPLPI+NIVGRS Sbjct: 252 KLLVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRS 311 Query: 386 LLRYWPPSKISNTIYEQQA 330 + RYWPPSK+S+TIY QA Sbjct: 312 VFRYWPPSKVSDTIYHDQA 330