BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010092
         (1617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284120.1| PREDICTED: probable thylakoidal processing p...   330   9e-88
ref|XP_002326914.1| predicted protein [Populus trichocarpa] gi|2...   313   1e-82
ref|XP_003602967.1| Thylakoidal processing peptidase [Medicago t...   309   1e-81
ref|NP_001149530.1| LOC100283156 [Zea mays] gi|195627824|gb|ACG3...   306   1e-80
ref|XP_002879265.1| chloroplast thylakoidal processing peptidase...   301   4e-79

>ref|XP_002284120.1| PREDICTED: probable thylakoidal processing peptidase 2, chloroplastic
            [Vitis vinifera] gi|147810057|emb|CAN78280.1|
            hypothetical protein VITISV_021649 [Vitis vinifera]
          Length = 368

 Score =  330 bits (845), Expect = 9e-88
 Identities = 195/391 (49%), Positives = 245/391 (62%), Gaps = 42/391 (10%)
 Frame = -2

Query: 1376 MAIRVTLSYSGYLAHNLASN--------------------LCPSSKV------------S 1293
            MAI++T++YSGY+A NLAS+                     CPS K             +
Sbjct: 1    MAIKLTVTYSGYVAQNLASSAGIRVGNCRSIHECWVRSRFFCPSQKPEVDSPVPSRAYQA 60

Query: 1292 NYRLFQTTCTARSSSLVFKSNNTKYSEIGSVRCETPXXXXXXXXXXXXXXXXXXSVGRGA 1113
            +YR  +  C A+ S+  +   +T   E+    C  P                   VG  +
Sbjct: 61   DYRRPKANCWAKVSTSAY---STLAGEVFGDSCRNPLI-----------------VGLIS 100

Query: 1112 LGVTSTG-SSSILGGF-----KPSSIIPFFKKLKWLPSDEPFHDCESEDYFSSTKIFRDE 951
            L  +STG S S +G F     K +SI+PF    KWLP +EP                 DE
Sbjct: 101  LMKSSTGVSESSVGVFGVSPLKATSILPFLPGSKWLPCNEPIQGSVG-----------DE 149

Query: 950  EDRERTR----KILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEP 783
             D+  T+    ++++   ++ V  RS+WLSKL N CSED + + TA+TVSLL  S LAEP
Sbjct: 150  VDKGGTQCCDVEVISKPLDRKVLERSNWLSKLLNCCSEDARAVFTAVTVSLLFRSPLAEP 209

Query: 782  RSIPSLSMYPTLDVGDRILAEKVSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIV 603
            RSIPS SMYPTLDVGDRILAEKVSY FR PEV+DIVIFK P  LQ+ G+S+GDVFIKRIV
Sbjct: 210  RSIPSASMYPTLDVGDRILAEKVSYVFRNPEVSDIVIFKVPPILQEIGYSAGDVFIKRIV 269

Query: 602  AKEGDHVEVCDGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNW 423
            AK GD+VEV +GKL+VN + Q+E++ILEPLAY M+ VLVP+GYVFV+GDNRNNSFDSHNW
Sbjct: 270  AKAGDYVEVSEGKLMVNGVAQEEDFILEPLAYNMDPVLVPEGYVFVLGDNRNNSFDSHNW 329

Query: 422  GPLPIKNIVGRSLLRYWPPSKISNTIYEQQA 330
            GPLPIKNIVGRS+LRYWPPSK+S+TIYE +A
Sbjct: 330  GPLPIKNIVGRSVLRYWPPSKVSDTIYEPEA 360


>ref|XP_002326914.1| predicted protein [Populus trichocarpa] gi|222835229|gb|EEE73664.1|
            predicted protein [Populus trichocarpa]
          Length = 362

 Score =  313 bits (801), Expect = 1e-82
 Identities = 189/366 (51%), Positives = 228/366 (62%), Gaps = 20/366 (5%)
 Frame = -2

Query: 1376 MAIRVTLSYSGYLAHNLASNLCPSSKVSNY----RLFQ---TTCTARSSSLV-------- 1242
            MAIRVT S+SGY+A NL   +     ++      R+F    TT T  +S +         
Sbjct: 1    MAIRVTFSFSGYVAQNLGVRVGNCRYLNECFIRSRIFASPATTTTTHNSDIEPPGPRTGT 60

Query: 1241 -FKSNNTK--YSEIGSVRCETPXXXXXXXXXXXXXXXXXXSVGRGALGVTSTGSSSI-LG 1074
             F+  N K  YS   ++                       S+ +   GV+ +   +  + 
Sbjct: 61   DFRRRNLKRNYSNSAAMYSTMAGEIFGDNCKGSAIAVGLVSLMKSTAGVSCSNMGACGIS 120

Query: 1073 GFKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSSTKIFRDEEDRERTRKILNDNGEKAVG 894
             FK  SI+PF +  +WLP +E      S            E DR  T  +   + EK   
Sbjct: 121  PFKAVSILPFLQGSRWLPCNEAVLGSRSP-----------EVDRGGTGTV--KSVEKVSE 167

Query: 893  GRS-SWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTLDVGDRILAEK 717
             +S SW S++ N CSED K + TA TVSLL  S LAEPRSIPS SM PTLDVGDRILAEK
Sbjct: 168  SKSRSWFSRVFNVCSEDAKAMFTAATVSLLFRSTLAEPRSIPSSSMSPTLDVGDRILAEK 227

Query: 716  VSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIVAKEGDHVEVCDGKLLVNDIIQD 537
            VSY FRKPEV+DIVIFKAP  LQ+ GFSSGDVFIKRIVAK GD+VEV +GKL VN ++QD
Sbjct: 228  VSYVFRKPEVSDIVIFKAPPILQEFGFSSGDVFIKRIVAKAGDYVEVREGKLYVNGVVQD 287

Query: 536  EEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSLLRYWPPSKI 357
            EE+I EPLAYEME VLVP+GYVFVMGDNRNNSFDSHNWGPLPIKNIVGRS+ RYWPPSK+
Sbjct: 288  EEFIKEPLAYEMELVLVPEGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRSVFRYWPPSKV 347

Query: 356  SNTIYE 339
            S+TIY+
Sbjct: 348  SDTIYD 353


>ref|XP_003602967.1| Thylakoidal processing peptidase [Medicago truncatula]
            gi|355492015|gb|AES73218.1| Thylakoidal processing
            peptidase [Medicago truncatula]
          Length = 375

 Score =  309 bits (792), Expect = 1e-81
 Identities = 184/398 (46%), Positives = 231/398 (58%), Gaps = 39/398 (9%)
 Frame = -2

Query: 1376 MAIRVTLSYSGYLAHNLASNLCPSSKVSNYRLFQTTCTARSSSLVFKSN----------- 1230
            MAIRVT S+SGY+A NL S+     +V+N R  Q  C     S +F SN           
Sbjct: 1    MAIRVTFSFSGYVAQNLVSSA--GVRVANSRCVQECCIL---SRLFGSNPKPDLERSGGF 55

Query: 1229 --------------------NTKYSEIGSVRCETPXXXXXXXXXXXXXXXXXXSVGRGAL 1110
                                +T   EI S  C  P                  S   GA+
Sbjct: 56   RNRNLYSDFTKPRNSPVSVYSTLAGEILSESCNNPIILGLISMMKSTAISGSTSAAMGAM 115

Query: 1109 GVTSTGSSSILGGFKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSS--------TKIFRD 954
            G++          FK SSIIPF +  KWLP +E      + +              +  D
Sbjct: 116  GISP---------FKTSSIIPFLQGSKWLPCNESVPTATTWEVDKGGTRIQSQPVSVSSD 166

Query: 953  EEDRERTRKILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSI 774
            +E R    +  N NG         W+SKL N CSED K + TA+TVSLL  S+LAEP+SI
Sbjct: 167  KESRLDLNQKENTNG---------WISKLLNVCSEDAKAVFTAVTVSLLFKSFLAEPKSI 217

Query: 773  PSLSMYPTLDVGDRILAEKVSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIVAKE 594
            PS SMYPTL+VGDR+L EK S++FRKP+V+DIVIFKAP+ L+  GFSS DVFIKR+VAK 
Sbjct: 218  PSASMYPTLEVGDRVLTEKFSFFFRKPDVSDIVIFKAPSWLKAYGFSSSDVFIKRVVAKA 277

Query: 593  GDHVEVCDGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPL 414
            GD VEV DGKLLVN + +DEE++LEPLAYE+  ++VPKG+VFVMGDNRN SFDSHNWGPL
Sbjct: 278  GDVVEVRDGKLLVNGVAEDEEFVLEPLAYELAPMVVPKGHVFVMGDNRNKSFDSHNWGPL 337

Query: 413  PIKNIVGRSLLRYWPPSKISNTIYEQQAGHCNFIVSGS 300
            PI+NIVGRS+ RYWPPSK+S+T+   ++   N  V+ S
Sbjct: 338  PIENIVGRSMFRYWPPSKVSDTVMVHKSSPGNKSVAVS 375


>ref|NP_001149530.1| LOC100283156 [Zea mays] gi|195627824|gb|ACG35742.1| peptidase/
            serine-type peptidase [Zea mays]
            gi|238010248|gb|ACR36159.1| unknown [Zea mays]
            gi|414885726|tpg|DAA61740.1| TPA: peptidase/ serine-type
            peptidase [Zea mays]
          Length = 396

 Score =  306 bits (783), Expect = 1e-80
 Identities = 176/387 (45%), Positives = 223/387 (57%), Gaps = 41/387 (10%)
 Frame = -2

Query: 1376 MAIRVTLSYSGYLAHNLASNL---CPSSKVSNYRLFQTTCTARSSSLVFKSNNTKYSEIG 1206
            MAIR+T+SYSGY+A NLA++L     S+  S  RL      A     +F S        G
Sbjct: 1    MAIRITVSYSGYVAQNLAASLGHRFSSASASGSRLLHDG--AWRPFCIFTSTRQPEQHRG 58

Query: 1205 S-------------------------------VRCETPXXXXXXXXXXXXXXXXXXSVGR 1119
            S                               +  ++P                  + G 
Sbjct: 59   SGSDRHDGGDYNHPKPQAIAAGAHSLLLTRACLSSKSPPPSLAVGLLSVLAQRTGPTPGT 118

Query: 1118 GALGVTSTGSSSILGGFKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSSTKIFRDEEDRE 939
                 + +GSS I  GF P+S +PF +  +WLP  +      S        +      ++
Sbjct: 119  TGSAASLSGSSPISLGFNPTSFLPFLQTARWLPCSDLATSSSSAPSSPPRSLAPSAPPKK 178

Query: 938  R-------TRKILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPR 780
                    +  I   +G  A   RS+WLS+  + CS+D K    A+TV LL  S LAEP+
Sbjct: 179  ALIGASTGSTGIATSSGAGAAMSRSNWLSRWVSSCSDDAKTAFAAVTVPLLYGSSLAEPK 238

Query: 779  SIPSLSMYPTLDVGDRILAEKVSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIVA 600
            SIPS SMYPT DVGDRILAEKVSY FR PE++DIVIF+AP  LQ  G+SSGDVFIKR+VA
Sbjct: 239  SIPSKSMYPTFDVGDRILAEKVSYIFRDPEISDIVIFRAPPGLQVYGYSSGDVFIKRVVA 298

Query: 599  KEGDHVEVCDGKLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWG 420
            K GD+VEV DGKL VN ++QDE+++LEP  YEME VLVP+GYVFV+GDNRNNSFDSHNWG
Sbjct: 299  KGGDYVEVRDGKLFVNGVVQDEDFVLEPHNYEMEPVLVPEGYVFVLGDNRNNSFDSHNWG 358

Query: 419  PLPIKNIVGRSLLRYWPPSKISNTIYE 339
            PLP++NIVGRS+LRYWPPSKI++TIYE
Sbjct: 359  PLPVRNIVGRSILRYWPPSKINDTIYE 385


>ref|XP_002879265.1| chloroplast thylakoidal processing peptidase [Arabidopsis lyrata
            subsp. lyrata] gi|297325104|gb|EFH55524.1| chloroplast
            thylakoidal processing peptidase [Arabidopsis lyrata
            subsp. lyrata]
          Length = 339

 Score =  301 bits (770), Expect = 4e-79
 Identities = 154/259 (59%), Positives = 190/259 (73%), Gaps = 2/259 (0%)
 Frame = -2

Query: 1100 STGSSSILG--GFKPSSIIPFFKKLKWLPSDEPFHDCESEDYFSSTKIFRDEEDRERTRK 927
            S+ + ++LG   FK SSIIPF +  KW+ +       E +D      +  D++D+E    
Sbjct: 89   SSTTMNVLGVSSFKASSIIPFLQGSKWMKNPP-----EVDDVDKGGTLCDDDDDKESR-- 141

Query: 926  ILNDNGEKAVGGRSSWLSKLANFCSEDGKVLVTAMTVSLLNSSYLAEPRSIPSLSMYPTL 747
                       G S W++KL N CSED K   TA+TVS+L  S LAEP+SIPS SMYPTL
Sbjct: 142  ----------SGGSGWVNKLLNICSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTL 191

Query: 746  DVGDRILAEKVSYYFRKPEVADIVIFKAPADLQKNGFSSGDVFIKRIVAKEGDHVEVCDG 567
            DVGDR++AEKVSY+FRKPEV+DIVIFKAP  L    +SS DVFIKRIVA EG+ VEV DG
Sbjct: 192  DVGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLDYDYSSNDVFIKRIVASEGNWVEVRDG 251

Query: 566  KLLVNDIIQDEEYILEPLAYEMERVLVPKGYVFVMGDNRNNSFDSHNWGPLPIKNIVGRS 387
            KLLVNDI+Q+E+++LEP++YEME + VPKGYVFV+GDNRN SFDSHNWGPLPI+NIVGRS
Sbjct: 252  KLLVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRS 311

Query: 386  LLRYWPPSKISNTIYEQQA 330
            + RYWPPSK+S+TIY  QA
Sbjct: 312  VFRYWPPSKVSDTIYHDQA 330