BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00010086
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   361   2e-97
emb|CBI26570.3| unnamed protein product [Vitis vinifera]              353   3e-95
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   349   8e-94
ref|XP_003610900.1| Pentatricopeptide repeat-containing protein ...   345   1e-92
ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group] g...   342   1e-91

>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  361 bits (926), Expect = 2e-97
 Identities = 175/212 (82%), Positives = 190/212 (89%)
 Frame = -1

Query: 1131 AIEDMLWAFELRATASWVFQLAIKRKVYRHDVFRVADKDWGADFRKLSPGAALVALTLWL 952
            A+ED+LWAFELRATASWVFQLA+KR +YRHDVFRVA+KDWGADFRK+S G+ALV LTLWL
Sbjct: 1202 ALEDLLWAFELRATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWL 1261

Query: 951  DHMQDASLQGSPESPKSIVLITGTAEYNMVSLDKTLKAYLWEMGSPFLPCKTRSGLLVAK 772
            DHMQDASLQG P SPKS+VLITGTAEYNMVSL+ TLKA+LWEMGSPFLPCKTRSGLLVAK
Sbjct: 1262 DHMQDASLQGYPLSPKSVVLITGTAEYNMVSLNSTLKAFLWEMGSPFLPCKTRSGLLVAK 1321

Query: 771  GHSLRMWLKDSPFCFDLELKDGPSLPDLNSMQLSEGYFMRIGLIPVLKDIHERLGHVRPK 592
             HSLRMWLKDS FC DLELKD PSLP+ NSMQL EG F+R GL+P  KDI ERLG VRPK
Sbjct: 1322 AHSLRMWLKDSSFCLDLELKDAPSLPESNSMQLMEGCFLRRGLVPAFKDITERLGDVRPK 1381

Query: 591  KFARLALLTDEKRDKAIQADLEGRKEKLAKMK 496
            KFARLALL DEKRDK I+AD+EG KEKL KMK
Sbjct: 1382 KFARLALLPDEKRDKVIRADIEGGKEKLEKMK 1413


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  353 bits (907), Expect = 3e-95
 Identities = 175/220 (79%), Positives = 190/220 (86%), Gaps = 8/220 (3%)
 Frame = -1

Query: 1131 AIEDMLWAFELRATASWVFQLAIKRKVYRHDVFRVADKDWGADFRKLSPGAALVALTLWL 952
            A+ED+LWAFELRATASWVFQLA+KR +YRHDVFRVA+KDWGADFRK+S G+ALV LTLWL
Sbjct: 784  ALEDLLWAFELRATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWL 843

Query: 951  DHMQ--------DASLQGSPESPKSIVLITGTAEYNMVSLDKTLKAYLWEMGSPFLPCKT 796
            DHMQ        DASLQG P SPKS+VLITGTAEYNMVSL+ TLKA+LWEMGSPFLPCKT
Sbjct: 844  DHMQAKYFYFWQDASLQGYPLSPKSVVLITGTAEYNMVSLNSTLKAFLWEMGSPFLPCKT 903

Query: 795  RSGLLVAKGHSLRMWLKDSPFCFDLELKDGPSLPDLNSMQLSEGYFMRIGLIPVLKDIHE 616
            RSGLLVAK HSLRMWLKDS FC DLELKD PSLP+ NSMQL EG F+R GL+P  KDI E
Sbjct: 904  RSGLLVAKAHSLRMWLKDSSFCLDLELKDAPSLPESNSMQLMEGCFLRRGLVPAFKDITE 963

Query: 615  RLGHVRPKKFARLALLTDEKRDKAIQADLEGRKEKLAKMK 496
            RLG VRPKKFARLALL DEKRDK I+AD+EG KEKL KMK
Sbjct: 964  RLGDVRPKKFARLALLPDEKRDKVIRADIEGGKEKLEKMK 1003


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  349 bits (895), Expect = 8e-94
 Identities = 175/232 (75%), Positives = 190/232 (81%), Gaps = 20/232 (8%)
 Frame = -1

Query: 1131 AIEDMLWAFELRATASWVFQLAIKRKVYRHDVFRVADKDWGADFRKLSPGAALVALTLWL 952
            A+ED+LWAFELRATASWVFQLA+KR +YRHDVFRVA+KDWGADFRK+S G+ALV LTLWL
Sbjct: 1234 ALEDLLWAFELRATASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWL 1293

Query: 951  DHMQ--------------------DASLQGSPESPKSIVLITGTAEYNMVSLDKTLKAYL 832
            DHMQ                    DASLQG P SPKS+VLITGTAEYNMVSL+ TLKA+L
Sbjct: 1294 DHMQASFLITIFVQLMEEYFYFWQDASLQGYPLSPKSVVLITGTAEYNMVSLNSTLKAFL 1353

Query: 831  WEMGSPFLPCKTRSGLLVAKGHSLRMWLKDSPFCFDLELKDGPSLPDLNSMQLSEGYFMR 652
            WEMGSPFLPCKTRSGLLVAK HSLRMWLKDS FC DLELKD PSLP+ NSMQL EG F+R
Sbjct: 1354 WEMGSPFLPCKTRSGLLVAKAHSLRMWLKDSSFCLDLELKDAPSLPESNSMQLMEGCFLR 1413

Query: 651  IGLIPVLKDIHERLGHVRPKKFARLALLTDEKRDKAIQADLEGRKEKLAKMK 496
             GL+P  KDI ERLG VRPKKFARLALL DEKRDK I+AD+EG KEKL KMK
Sbjct: 1414 RGLVPAFKDITERLGDVRPKKFARLALLPDEKRDKVIRADIEGGKEKLEKMK 1465


>ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512235|gb|AES93858.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1508

 Score =  345 bits (885), Expect = 1e-92
 Identities = 170/232 (73%), Positives = 194/232 (83%), Gaps = 1/232 (0%)
 Frame = -1

Query: 1131 AIEDMLWAFELRATASWVFQLAIKRKVYRHDVFRVADKDWGADFRKLSPGAALVALTLWL 952
            A+ D+LWAFELRATASWVFQLAIKR +YRHD+FRVA KDWGADFRKLS G+ALV LTLWL
Sbjct: 1244 ALVDLLWAFELRATASWVFQLAIKRSIYRHDIFRVAQKDWGADFRKLSAGSALVGLTLWL 1303

Query: 951  DHMQDASLQGSPESPKSIVLITGTAEYNMVSLDKTLKAYLWEMGSPFLPCKTRSGLLVAK 772
            DHMQDASLQG PESPKS+VLITGTAEYNMVSLD TLKA+LWEMGSPFLPCKTR G+LVAK
Sbjct: 1304 DHMQDASLQGYPESPKSVVLITGTAEYNMVSLDSTLKAFLWEMGSPFLPCKTRHGVLVAK 1363

Query: 771  GHSLRMWLKDSPFCFDLELKDGPSLPDLNSMQLSEGYFMRIGLIPVLKDIHERLGHVRPK 592
             HSLRMWLKDS FC DLELKD P+LP LNSMQL  G F+R GL+P   +I E+L  V PK
Sbjct: 1364 AHSLRMWLKDSSFCLDLELKDSPNLPKLNSMQLINGCFIRRGLVPAFNEITEKLKVVSPK 1423

Query: 591  KFARLALLTDEKRDKAIQADLEGRKEKLAKMKTTS-ALAKPGKKTKFGRYIR 439
            KF+RLALL D+KR K +QAD++GRKEKL K+K +   L +  KK +  ++IR
Sbjct: 1424 KFSRLALLPDDKRSKVMQADVDGRKEKLEKLKKSDPRLLRKIKKIRKKKFIR 1475


>ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
            gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza
            sativa Japonica Group] gi|113595105|dbj|BAF18979.1|
            Os06g0199100 [Oryza sativa Japonica Group]
          Length = 1283

 Score =  342 bits (877), Expect = 1e-91
 Identities = 164/234 (70%), Positives = 199/234 (85%), Gaps = 2/234 (0%)
 Frame = -1

Query: 1131 AIEDMLWAFELRATASWVFQLAIKRKVYRHDVFRVADKDWGADFRKLSPGAALVALTLWL 952
            A+ED+LWAFE RATASW+FQLA+KR +Y H++FRV +KDWGAD RKLS GAALVALTLWL
Sbjct: 1042 ALEDLLWAFERRATASWIFQLAVKRSIYHHNIFRVEEKDWGADLRKLSAGAALVALTLWL 1101

Query: 951  DHMQDASLQGSPESPKSIVLITGTAEYNMVSLDKTLKAYLWEMGSPFLPCKTRSGLLVAK 772
            D MQDASLQG+PESPKSIVL+TG  EYNMVSL KT++AYL EMGSPFLPC++RSG  V K
Sbjct: 1102 DQMQDASLQGAPESPKSIVLVTGEGEYNMVSLRKTIRAYLLEMGSPFLPCRSRSGRFVVK 1161

Query: 771  GHSLRMWLKDSPFCFDLELKDGPSLPDLNSMQLSEGYFMRIGLIPVLKDIHERLGHVRPK 592
             +SL+MWLKDSPFC DLELKD P+LP  NSM+L+EGYFMR GL+PV KDIHERLG V PK
Sbjct: 1162 AYSLKMWLKDSPFCLDLELKDAPALPKTNSMKLTEGYFMRAGLVPVFKDIHERLGEVWPK 1221

Query: 591  KFARLALLTDEKRDKAIQADLEGRKEKLAKMKTTS-ALAKPGKK-TKFGRYIRR 436
            KF+RLALL++E RD+ I+AD++GRKEKL KMK    A+AK  K+  + G+++++
Sbjct: 1222 KFSRLALLSEESRDEVIKADIKGRKEKLEKMKKQGLAIAKRSKRGPRRGKFVKQ 1275